This document discusses enolate chemistry, including the formation and reactivity of enolates. It describes:
1. How enolates are formed through deprotonation of ketones using bases, and how the pKa values of acidic protons can predict suitable bases.
2. Methods for regioselective and stereoselective enolate formation, including kinetic vs thermodynamic control and the factors that influence each.
3. Important reactions of enolates including silyl enol ether formation, alkylation, reactions with enones, and aldol reactions. It highlights the need for regioselective and stereoselective control in aldol reactions.
4. How lithium, bor
IMPORTANT NAMED REACTIONS in Organic synthesis with Introduction, General Mechanism, and their synthetic application covering more than 20 named reactions in it.
IMPORTANT NAMED REACTIONS in Organic synthesis with Introduction, General Mechanism, and their synthetic application covering more than 20 named reactions in it.
more chemistry contents are available
1. pdf file on Termmate: https://www.termmate.com/rabia.aziz
2. YouTube: https://www.youtube.com/channel/UCKxWnNdskGHnZFS0h1QRTEA
3. Facebook: https://web.facebook.com/Chemist.Rabia.Aziz/
4. Blogger: https://chemistry-academy.blogspot.com/
Organic Synthesis:
The Disconnection Approach
One Group C-C Disconnection of Alcohol and Alkene
An organic species which has a carbon atom bearing only six electrons in its outermost shell and has a positive charge is called carbocation.
The positively charged carbon of carbocation is sp2 hybridized.
The unhybridized p-orbital remains vacant.
They are highly reactive and act as reaction intermediate.
They are also called carbonium ion.
Olefin metathesis is a powerful reaction catalyzed by transition metals, in which two olefins can form a ring or rearrange their connectivity, or a double bond in a ring can be opened. These types of metathesis are called ring closing metathesis, cross metathesis or ring opening polymerization, respectively.
Created by Elizabeth Billings
Edited by Margaret Hilton
Honors Organic Chemistry
Chem 2321 (Sigman), 2013, University of Utah
Retrosynthesis or The Disconnection approach has been discussed in this presentation. Useful Courseware for the Undergraduate and Postgraduate students of Pharmacy , and Chemical Sciences
Rearrangement to Electron Deficient Carbon
Rearrangement to Electron Deficient Nitrogen
Rearrangement to Electron Deficient Oxygen
Rearrangement to Electron-Rich Carbon
Aromatic Rearrangements
Molecular Rearrangements of Organic Reactions ppsOMPRAKASH1973
This PPT is usefull for aspirants of JEE-IIT, CSIR-NET and UPSC exams in CHEMISTRY section. It is also usefull for grduates and Post graduates students of Indian Universities.
Synthetic reagent and applications OF ALUMINIUM ISOPROPOXIDEShikha Popali
SYNTHETIC REAGENTS AND APPLICATIONS OF ALUMINIUM ISOPROPOXIDE ITS ALTERNATIVE NAMES AND ITS PHYSICAL PROPERTIRS , HANDLING, STORAGE, PRECAUTIONS, PREPARATIONS, SYNTHETIC APPLICATIONS
more chemistry contents are available
1. pdf file on Termmate: https://www.termmate.com/rabia.aziz
2. YouTube: https://www.youtube.com/channel/UCKxWnNdskGHnZFS0h1QRTEA
3. Facebook: https://web.facebook.com/Chemist.Rabia.Aziz/
4. Blogger: https://chemistry-academy.blogspot.com/
Organic Synthesis:
The Disconnection Approach
One Group C-C Disconnection of Alcohol and Alkene
An organic species which has a carbon atom bearing only six electrons in its outermost shell and has a positive charge is called carbocation.
The positively charged carbon of carbocation is sp2 hybridized.
The unhybridized p-orbital remains vacant.
They are highly reactive and act as reaction intermediate.
They are also called carbonium ion.
Olefin metathesis is a powerful reaction catalyzed by transition metals, in which two olefins can form a ring or rearrange their connectivity, or a double bond in a ring can be opened. These types of metathesis are called ring closing metathesis, cross metathesis or ring opening polymerization, respectively.
Created by Elizabeth Billings
Edited by Margaret Hilton
Honors Organic Chemistry
Chem 2321 (Sigman), 2013, University of Utah
Retrosynthesis or The Disconnection approach has been discussed in this presentation. Useful Courseware for the Undergraduate and Postgraduate students of Pharmacy , and Chemical Sciences
Rearrangement to Electron Deficient Carbon
Rearrangement to Electron Deficient Nitrogen
Rearrangement to Electron Deficient Oxygen
Rearrangement to Electron-Rich Carbon
Aromatic Rearrangements
Molecular Rearrangements of Organic Reactions ppsOMPRAKASH1973
This PPT is usefull for aspirants of JEE-IIT, CSIR-NET and UPSC exams in CHEMISTRY section. It is also usefull for grduates and Post graduates students of Indian Universities.
Synthetic reagent and applications OF ALUMINIUM ISOPROPOXIDEShikha Popali
SYNTHETIC REAGENTS AND APPLICATIONS OF ALUMINIUM ISOPROPOXIDE ITS ALTERNATIVE NAMES AND ITS PHYSICAL PROPERTIRS , HANDLING, STORAGE, PRECAUTIONS, PREPARATIONS, SYNTHETIC APPLICATIONS
Use of stoichiometric amounts of a chiral source. The usual suspects will be discussed, including borane reagents (mostly pinene derivatives) and the Brown allylation.
Basic principles & questions and answers of organic chemistry Bryar Ali Rus
this is some basic principles and question & answers of previous years of organic chemistry with notes on dr.emad manhal's examination , school of pharmacy , university of sulaimani .
This is the contents of this presentation-
• The arenium ion mechanism,
• Orientation and reactivity,
• Energy profile diagrams.
• o/p ratio,
• Orientation in benzene ring with more than one substituent, orientation in other ring systems.
• ipso attack
• Diazonium coupling,
• Gatterman-Koch reaction,
• Reimer-Tiemann reaction,
• Pechman reaction,
• Houben –Hoesch reaction,
• Kolbe Schmitt reaction,
• Recapitulation of halogenation, nitration, sulphonation, and F.C. reaction.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
The increased availability of biomedical data, particularly in the public domain, offers the opportunity to better understand human health and to develop effective therapeutics for a wide range of unmet medical needs. However, data scientists remain stymied by the fact that data remain hard to find and to productively reuse because data and their metadata i) are wholly inaccessible, ii) are in non-standard or incompatible representations, iii) do not conform to community standards, and iv) have unclear or highly restricted terms and conditions that preclude legitimate reuse. These limitations require a rethink on data can be made machine and AI-ready - the key motivation behind the FAIR Guiding Principles. Concurrently, while recent efforts have explored the use of deep learning to fuse disparate data into predictive models for a wide range of biomedical applications, these models often fail even when the correct answer is already known, and fail to explain individual predictions in terms that data scientists can appreciate. These limitations suggest that new methods to produce practical artificial intelligence are still needed.
In this talk, I will discuss our work in (1) building an integrative knowledge infrastructure to prepare FAIR and "AI-ready" data and services along with (2) neurosymbolic AI methods to improve the quality of predictions and to generate plausible explanations. Attention is given to standards, platforms, and methods to wrangle knowledge into simple, but effective semantic and latent representations, and to make these available into standards-compliant and discoverable interfaces that can be used in model building, validation, and explanation. Our work, and those of others in the field, creates a baseline for building trustworthy and easy to deploy AI models in biomedicine.
Bio
Dr. Michel Dumontier is the Distinguished Professor of Data Science at Maastricht University, founder and executive director of the Institute of Data Science, and co-founder of the FAIR (Findable, Accessible, Interoperable and Reusable) data principles. His research explores socio-technological approaches for responsible discovery science, which includes collaborative multi-modal knowledge graphs, privacy-preserving distributed data mining, and AI methods for drug discovery and personalized medicine. His work is supported through the Dutch National Research Agenda, the Netherlands Organisation for Scientific Research, Horizon Europe, the European Open Science Cloud, the US National Institutes of Health, and a Marie-Curie Innovative Training Network. He is the editor-in-chief for the journal Data Science and is internationally recognized for his contributions in bioinformatics, biomedical informatics, and semantic technologies including ontologies and linked data.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
1. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 1
Enolate Chemistry
1. Some Basics
In most cases the equilibrium lies almost completely on the side of the ketone.
The ketone tautomer is electrophilic and reacts with nucleophiles:
The enol tautomer is nucleophilic and reacts with electrophiles. There are two possible
products - enols are ambident nucleophiles:
The nucleophilic enol tautomer (and especially the enolate variant) is one of the most
important reactive species for C-C bond formation.
Treat a ketone with an appropriate base and can get deprotonation at the α-position to form an
enolate:
Enolates are synthetically much more useful than enols (although they react analogously).
Imine anions and eneamines are synthetic equivalents of enolate anions.
H
N
Li N
H
Imine anion eneamine
By knowing the pKa values of the relevant acidic protons it is possible to predict suitable
bases for forming the corresponding enolates.
2. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 2
Some Important pKa Values
CH3
NO2
H2
C N
O
O
CH2
N
O
O
-
+
- -
+
-pKa ~ 10
Enolates are nucleophiles and ketones are electrophiles - therefore there is always the
potential problem for self condensation.
If this is desirable we need to use a base which does not completely deprotonate the carbonyl
compound i.e. set up an equilibrium. This is best achieved when the pKa of the carbonyl
group and conjugate acid (of the base) are similar:
3. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 3
pKa (tBuOH) ~ 18. A stronger base. pKa difference of 2. Ratio of ketone to enolate will be of
the order 100:1 i.e. there will be about 1% enolate in solution.
The greater is the difference in pKa's the more heavily shifted is the equilibrium (to
either left or right).
When it is desirable to generate the enolate in small quantities, an alkoxide base is ideal (at
least with standard ketones).
NOTE: All bases are potential nucleophiles. Alkoxide addition to the carbonyl group is
reversible in the case of ketones and is therefore usually not a problem. Ideally we want to use
non-nucleophilic bases to avoid potential chemoselectivity problems. Most non-nucleophilic
bases have the nucleophilic centre surrounded by sterically very demanding substituents.
How can we avoid self-condensation? Use a very strong base to shift the equilibrium
completely over to the right.
Important 'Strong' Bases for Forming Enolates from Ketones:
So for LDA the pKa difference between acetone (20) and diisopropylamine (38) is 18 (very
large). Consequently treatment of a ketone with 1 equivalent of LDA causes essentially
complete deprotonation to form the corresponding lithium enolate.
Butyl Lithium (BuLi) is an excellent base and even stronger than any lithium amide, but is
only very rarely used to form enolates from ketones. BuLi is a strong nucleophile with little
steric hindrance.
2. Regioselective Enolate Formation
Kinetic versus Thermodynamic Control
Consider the following unsymmetrically substituted ketone. There are two sites of proton
abstraction leading to two different product enolates. It is clearly important to be able to
control the site of enolate formation - ideally we should have two sets of reaction conditions
for accessing selectively either enolate.
4. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 4
Although the pKa difference between the two sites is only 1-2 units, this difference, when
combined with the steric accessibility of the α-protons, is usually enough to be able to
selectively form the kinetic enolate.
NOTE: The more substituted enolate is not always the thermodynamically more stable
enolate; in some cases steric hindrance can destabilise the more substituted enolate; thus in
these cases the kinetic and thermodynamic enolate are the same product.
Enolate formation is essentially just an acid-base reaction. The position of the equilibrium is
controlled by a variety of factors: solvent, base, cation, temperature.
factors favouring the kinetic
enolate
factors favouring the
thermodynamic enolate
aprotic solvents e.g. THF, Et2O
(no acidic proton to encourage
the reverse reaction)
protic solvents e.g. ROH which
have slightly more acidic protons
than the enolate and favour
formation of the enol and
tautomerisation to the ketone
(i.e. the reverse reaction)
strong bases e.g. LDA (which
generate a weak conjugate acid
(e.g. iPr2NH) specifically one
which is less acidic than the
enolate product).
weaker bases which provide a
relatively strong conjugate acid.
oxophilic cations e.g. Li+
low temperature (e.g. < -78 C) higher temperature
short reaction times long reaction times
All these conditions suppress
equilibration and ensure the
reaction is irreversible.
All these conditions encourage
the reverse reaction
5. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 5
Formation of the Kinetic Enolate
Formation of the Thermodynamic Enolate
Other Methods of Regioselective Enolate Formation
It is not always necessary to rely on kinetic or thermodynamic control for forming enolates. In
Example 1. Enone reduction
many cases chemical modification of pre-existing functionality (especially α,β-unsaturated
ketones) can be used to regioselectively introduce the enolate:
Example 2. From α-bromo ketones
Example 3. Conjugate addition of soft nucleophiles such as cuprates to enones.
Example 4. Hydrosilylation of enones.
6. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 6
xample 5. Direct deprotonation of enones.E
. Stereoselective Enolate Formation - Control of E / Z Enolate
at the geometry of a substituted enolate (E or Z) can be very important in
determining the stereochemical outcome of aldol reactions. In many cases the aldol reaction is
3
Geometry
We will see th
stereospecific; thus if we can access either enolate geometry at will it should be possible to
control the stereochemistry in the aldol products. This is crucial for stereoselective synthesis.
Reminder: You must know how to assign stereochemical descriptors (E/Z) to enolates.
Consider the formation of lithium enolates using a variety of bases (kinetic control).
General observations:
7. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 7
1. LHMDS generally provides the (Z)-enolate as the major product
2. LTMP (very bulky) affords the (E)-enolate as the major product
erse selectivity.
n
accurate representation of the deprotonation reaction) using chair-like transition states:
3. LDA gives intermediate results.
4. Use of HMPA as a strongly Lewis basic donor-co-solvent can rev
Ireland has provided a rationale (there is NO physical evidence to show that the model is a
wo interactions are deemed important for determining the stereochemical outcome of the
reaction.
en R1 is NOT sterically demanding or when H <-> R2 << Me <-> R2 then the (E)-
stereoisomer is favoured.
teraction and favours the formation of the (Z)-stereoisomer.
system is more complicated.
scribed invokes a monomeric organolithium species. In reality
organolithium molecules exist as oligomers (tetramers, hexamers etc). The Ireland model
base (α-proton is less acidic
in both cases than in a ketone).
late is favoured with LDA in THF. Addition of HMPA leads
to a preferential formation of the (Z)-enolate, which is explained by the strong solvation of the
lithum ion by the HMPA leading to a loose, perhaps acyclic transition state. Tertiary amides
T
1. wh
2. when R1 is large (tBu is especially good) then Me <-> R1 >> H <-> R1 and this
overrides the Me <-> R2 in
The use of strongly coordinating solvents such as HMPA disrupts the transition state and the
Cautionary note: the T.S. de
while fairly useful, is a oversimplification of the real situation.
Esters and amides also form enolates on treatment with a strong
In the case of esters, the (E)-eno
8. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 8
tend to form (Z)-enolates due to the steric hindrance of nitrogen substituents with the double
bond substituent.
OLiOLiO
O OO
O
O
O
OLi
N
O
N
OLi
N
OLi
LDA, THF
-78oC
(E) (Z)
95 : 5
LDA, HMPA
-78oC
(Z)
LDA, THF
-78oC
(E)
(Z)
> 97 : < 3
4. Reactions of Enolates
act at either oxygen or carbon terminus.
st carbon electrophiles) tend to react at Carbon (soft
centre).
Ethers
• Readily formed by trapping a lithium enolate with TMSCl.
d is responsible for O-alkylation being the major product.
• Enolates are ambident nucleophiles and can re
• SOFT electrophiles (e.g. mo
• HARD electrophiles tend to react at Oxygen (hard centre).
4.1. Silyl Enol
• The strong Si-O bon
• Less nucleophilic than metal enolates (lithium, zinc, boron etc).
• BUT they are easily prepared and readily manipulated.
Alkylation with Alkyl Halides
• Reaction is most efficient in the presence of a Lewis acid which complexes to the
halogen making it a better leaving group.
9. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 9
• Tertiary alkyl halides, allylic and benzylic systems are the best - all these systems a
capable of stabilising positive charge which
re
implies the reaction is proceeding via an
SN1-type pathway.
Alkylation with Acetals
Reaction with Enones
• Reaction proceeds in a conjugate (Michael or 1,4-) fashion.
xidation of Silyl Enol EthersO
1.
2.
Oxidative Cleavage
earrangement of Silyl Enol EthersR
10. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 10
Claisen Rearrangement (an example of a [3,3]-sigmatropic shift)
his is an important example of STRATEGIC PATTERN RECOGNITIONT
2 The Crossed Aldol Reaction4.
• One of the most important methods for C-C bond formation.
• Very widely used in organic synthesis.
All the issues previously discussed (1-3) and more (4-6) now become very important:
2. complete or partial enolisation (self vs. cross condensation)
important when chiral aldehydes react with
ral enolates)
of one carbonyl group reacts with the carbonyl group
(usually an aldehyde) of another. To avoid self condensation, the enolate component is
formed beforehand.
1. regioselective enolate formation (kinetic and thermodynamic enolates)
3. stereochemistry of the enolate (E or Z)
4. simple diastereoselection - (syn and anti aldol products)
5. diastereofacial selectivity (this becomes
achiral enolates and when achiral aldehydes react with chi
6. double diastereodifferentiation (reaction of chiral aldehydes with chiral enolates) -
matched and mismatched pairs.
In the crossed aldol reaction, the enolate
11. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 11
We will consider the reaction of three types of enolate:
• lithium enolates (see above)
• boron enolates
Aldol Reaction
imple Diastereoselection
tes (derived from ethyl ketones) with achiral
aldehydes. There are two possible products termed syn and anti. Consider the reaction of
benzaldehyde PhCHO:
• silyl enol ethers
Lithium Enolates in the
S
Let us consider the reaction of achiral enola
various lithium enolates with
R(1)
(Z) : (E) ratio of lithium
enolate
syn : anti ratio of aldol
product
Et 30 : 70 64 : 36
iPr 0 : 100 45 : 55
iPr >98 : <2 90 : 10
tBu >98 : <2 >98 : <2
mesit 4,6,-
trimethylphenyl)
yl (2,
8 : 92 8 : 92
Observations:
• The es highly stereoselective (stereospecific too).
• Stereospecificity is observed when R(1) is large (tBu or mesityl).
is not always completely stereospecific in these cases in that the (E / Z)
stereochemistry of the enolate is not transferred directly to a similar ratio of syn:anti
are also
reaction is sometim
• Reaction
products. This suggests some equilibration or isomerisation processes
occurring.
• (Z)-enolates are more stereoselective than (E)-enolates.
• When the reaction is stereospecific, (Z)-enolates give the syn products and (E)-
enolates afford the anti product.
12. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 12
Reaction through a chair-like Zimmerman-Traxler T.S. can rationalize the stereochemistry.
However the requirement for 1) a bulky group α-to the enolate and 2) a good method for
stereoselective formation of lithium enolates has restricted the synthetic utility of these
species. The search for increased stereocontrol has led to the development of boron enolates.
Boron Enolates in Aldol Reactions
• Usually much more stereoselective than lithium enolates.
• Reaction is highly stereospecific (Z)-boron enolate gives the syn aldol product and
(E)-boron enolate provides the anti aldol product.
• The stereospecificity can be readily rationalised by invoking chair-like Zimmerman-
Traxler T.S.'s (see above).
• The shorter B-O bond - compared with Li-O - leads to a tighter T.S. and accounts for
the improved stereoselectivity.
Preparation of Boron Enolates
Usually formed from a dialkylboron halide or triflate and a sterically hindered tertiary amine
base such as triethylamine or Hünig's base (iPr2NEt).
Example
• Under most conditions, (Z)-boron enolates are formed with high stereoselectivity.
• (E)-boron enolates can be formed under carefully chosen reaction conditions (e.g.
(cyclohexyl)2BCl / Et3N in Et2O):
13. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 13
Note that water is not sufficient to cleave the O-B bond in the aldol product. Oxidative
cleavage with alkaline peroxide is the standard method of work-up.
Silyl Enol Ethers in Aldol Reactions (Mukaiyama Aldol Reaction)
Preparation of TMS enol ethers
1) basic conditions - trap lithium enolate
2) Lewis acidic conditions - TMSOTf or TMSCl in the presence of a tertiary amine (requires
temperatures >0 C).
Mukaiyama Aldol Reaction
• TMS enol ethers are much less nucleophilic than boron or lithium enolates and do not
react directly with aldehydes.
• Lewis acid complexation increases the electrophilicity of aldehydes and this is
sufficient to allow reaction.
• The reaction mechanism is quite different to that of lithium or boron enolates
described above. Internal coordination and reaction through a 6-membered T.S. is not
possible with silicon since the silicon atom is not Lewis acidic.
• Reaction proceeds through an open T.S.
Stereoselectivity of the reaction is usually low.
14. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 14
Examples:
The Lewis acid activation conditions allows the use of acetals as masked aldehydes:
The use of chiral Lewis acids in sub-stoichiometric quantities provides one important method
for controlling the stereoselectivity of this reaction and is rapidly becoming a very useful
method. One example developed by Carreira will serve to illustrate the idea:
S.V.Ley and L. R. Cox, Chemtracts: Org. Chem., 1997, 10, 853-857.
15. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 15
Diastereofacial Selectivity
So far we have discussed three types of enolates which sometimes give high levels of simple
diastereoselectivity (syn or anti product). In most cases the relative stereocontrol is
determined by the geometry of the enolate (cyclic T.S. with boron or lithium enolates).
To control the absolute stereochemistry of the reaction requires facial selectivity of the
prochiral carbonyl group. There are three methods to do this:
1. substrate control in which stereochemical information in the substrate(s) directs the
stereochemical outcome of the reaction.
2. auxiliary control involves the use of a temporary directing group usually attached to
the enolate
3. reagent control in which chiral ligands on the metal enolate or a chiral Lewis acid
provides stereocontrol.
Substrate Control
Models for 1,2- induction
1,2-induction in a α-chiral carbonyl compound
Cram-chelate model (L = OR´, NHR´etc)
Cram model
16. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 16
Felkin-Ahn model
O. Reiser, A. Mengel Chem. Rev. 1999, 99, 1191.
Chiral Aldehyde and Achiral Enolate
• Aldehydes which possess an α-stereogenic centre often react with high levels of
stereocontrol.
• The nature of the groups attached to the stereogenic centre as well as the precise
reaction conditions will determine which type of T.S. is important.
Example1.
Example 2.
Aldol reaction of α-chiral aldehyde and Z-enolate
17. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 17
1,3-syn-pentane interaction gauche interaction1,3-syn-pentane interaction gauche interaction
Anti-Felkin transition state
Minimizes both unfavorable
interactions
Anti-Felkin transition state
Minimizes both unfavorable
interactions
Example 3.
Aldol reaction of α-chiral aldehyde and E-enolate
leads to Felkin product gauche interaction unfavorableleads to Felkin product gauche interaction unfavorable
18. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 18
The (E)-enolate should provide the anti aldol product (cyclic T.S.) i.e. B and D. The α-
stereogenic centre in the aldehyde favours product B (Felkin-Anh T.S.)
Chiral Enolate and Achiral Aldehyde
The presence of a stereogenic centre α-to the enolate can sometimes provide a good method
for controlling diastereofacial selectivity.
Double Diastereodifferentiation
The problem is complicated when both aldehyde and enolate substrates are chiral and possess
controlling stereogenic centres (usually α).
This is a common problem in complex natural product synthesis.
In this case each substrate has an inherent facial bias. When both substrates have the same
bias, they reinforce the facial selectivity leading to improved stereoselectivity (reinforced
stereoselection). Matched case.
When the inherent facial bias in each substrate opposes one another, stereoselectivity is
reduced. Mismatched case.
19. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 19
One substrate usually has a stronger facial bias than the other and can completely override the
facial preference of its partner. In this case one substrate controls the stereochemical outcome
entirely.
Auxiliary Control
• Many successful chiral auxiliaries have been developed for controlling the
stereochemical outcome of the aldol reaction.
• Only one example will be discussed - chiral oxazolidinones developed by Evans.
• Lithium, boron and titanium enolates allow stereocontrol of enolate alkylation or aldol
reactions
• Metal cations form chelates
• (Z)-enolates are invariably formed and reaction proceeds through a cyclic T.S. to
provide the syn products (almost exclusively).
• The substituent(s) on the oxazolidinone controls the facial selectivity. The
norephedrine-derived auxiliary provides one product and the phenylalanine- and
valine-derived auxiliaries give the opposite facial selectivity.
• These auxiliaries are so powerful in their facial directing ability that they usually
override the inherent facial bias of chiral aldehydes and even the mismatched pair can
provide high levels of stereoselectivity.
20. Prof. Dr. Burkhard König, Institut für Organische Chemie, Uni Regensburg 20
Reagent Control
• Use of chiral ligands at the metal centre provides an alternative and powerful approach
to controlling the stereochemical outcome of reactions.
• The most widely used system is to prepare the boron enolate from diisopinocamphenyl
boron triflate or chloride. Other systems are derived from menthone.
• This system is usually used to reinforce or overturn the inherent stereochemical bias of
a chiral ketone or aldehyde and is particularly useful at later stages of synthesis.
Example: