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International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395 -0056
Volume: 04 Issue: 03 | Mar -2017 www.irjet.net p-ISSN: 2395-0072
© 2017, IRJET | Impact Factor value: 5.181 | ISO 9001:2008 Certified Journal | Page 1561
DFT calculations and insilico drug activity predictions for the
Bioactive constituent present in Delonix regia Plant
M.Suganya1, G.Swarnalatha 2,D.Bala Abarna3 & S.Devi Meenakshi4
1Assistant Professor of Chemistry
2Lecturer in Chemistry
3Assistant Professor of Physics
HOD and 4Assistant Professor of Chemistry
Department of Chemistry and Physics
Nadar Saraswathi College of Arts and Science, Theni.
---------------------------------------------------------------------***---------------------------------------------------------------------
Abstract - Medicinal important compounds like
Quercetin, Epilupeol, Quercetintrihexose,
Isorhamnetolrhamnosyl-hexoside and Stigmasterol were
selected for their stability determination via binding energy
calculation. The binding energy of these were determined by
the Gaussian software 5.0. DFT were accomplished B3LYPand
HF methods using three basis set be found of STO-3G, 3-21G, 6-
31G. The DFT calculations of binding energy proved that
Quercetin trihexose was recognized to be more stable among
other four compounds. Binding energybySTO-3G (-2220.678),
32-1G (-2237.858) and 63-1G (-2249.565) were observed by
B3LYP method. HF method binding energies were found to be
STO-3G (-2208.715), 32-1G (-2225.029) and 63-1G (-
2236.484). These results showed that among the medicinal
compounds present in the Delonix regia plant, Quercetin
trihexose was found to have very good binding energy.
Because of its good binding energy and stability it may find as
potential medicine for the treatment of disease.
Key Words: Delonix regia plant, DFT, B3LYP and HF.
1.INTRODUCTION
Delonixregia plant with orange-red flowers belongs to the
family of Ceasalpiniaceae, also known as Gulmohar royal
Poinciana regia or Flamboyant [1]. The extract of
Delonixregia is known to have medicinal properties.This
plant isused in several countries to prepare extracts with
antimicrobial and antifungal activities [2-5]. The
Delonixregia plant is used in medicine as antiviral, anti-
inflammatory and cytotoxic activity [1]. This plant is used in
several countries to prepare extracts withantimicrobial and
antifungal activities and used as antibiotics [6]. Binding
energies of eight medicinal compounds has been computed
using the B3LYP and HF methods by DFT approach to
predict the most stable drug.
2. Experimental Methods
2.1 Materials
The medicinal important compounds presentin the
Delonix regia plant were selected for our work from the
literature [1-6] as given below the structures Quercetin,
Epilupeol, Quercetintrihexose, Isorhamnetolrhamnosyl-
hexoside and Stigmasterol in Figure.1-5.
Fig -1: Quercetin
Fig -2: Epilupeol
Fig -3: Quercetin tihexose
Fig -4:Isorhamnetinrhamnosyl-
hexoside
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395 -0056
Volume: 04 Issue: 03 | Mar -2017 www.irjet.net p-ISSN: 2395-0072
© 2017, IRJET | Impact Factor value: 5.181 | ISO 9001:2008 Certified Journal | Page 1562
Fig -5: Stigmasterol
DFT Methods
The structures of the constituents like Quercetin,
Epilupeol, Quercetintrihexose, Isorhamnetolrhamnosyl-
hexoside and Stigmasterol were drawn in GaussView5.0the
binding energies were calculated by B3LYP and HF methods
using three basis sets STO-3G, 3-21G, 6-31G [7-10]. The
binding energy of the above compounds predicted byB3LYP
and HF method were given in Table-I &Table-II.
Table- 1 Binding energy of compounds in B3LYP
method
Table- 2 Binding energy of compounds in HF
method
Result and Discussion
2.2 DFT Calculation
2.2.1 B3LYP Method
The binding energy calculation by using three basis sets
(STO-3G, 3-21G & 6-31G) listed in Table- I showed the
following result
STO-3G
The binding energy for the selected five compounds were
found to be -1089.641, -1231.708,-2220.678,-2219.277and
-1193.828a.u. and it was found thatQuercetintrihexosehave
good binding energy.
3-21G
From above compounds were found to be
Quercetintrihexose havea goodbindingenergyas -2237.858
a.u among the other bioactive constituentsusing3-21Gbasis
sets, other compounds binding energies were found to be -
1098.001, -1240.293, -2236.520 and -1202.024 a.u.
6-31G
The binding energies of the above five compounds by 6-31G
basis sets were found to be -1103.765,-1246.712,-2248.197
and -1208.262 a.u. From the above data it was ended with
the intention of Quercetintrihexosewasfoundtohavea good
binding energy as-2249.565a.u. among the other bioactive
constituents.
2.2.1 HF Method
The binding energycalculatedtotheabovecompoundsgiven
in Table- II for the three basis sets. The binding energy
calculated by STO-3G basissetswere-1083.665,-1223.366,-
2208.715, -2207.189 and -1185.917a.u for Quercetin,
Epilupeol, Quercetintrihexose, Isorhamnetol rhamnosyl-
hexoside and Stigmasterol compounds. 321-G basis sets
predicted -1091.672, -1231.488,-2225.029,-2223.548and -
1193.650a.u. 6-31G basissetsshowed-1097.322,-1237.661,
-2236.484, -2234.96, and -1199.778 a.u. as binding energies
for the above compounds as given in the same order.
3. CONCLUSIONS
The binding energy of five bioactive constituents were
calculated by B3LYP and HF method using STO-3G, 3-21G &
6-31G. The B3LYP method revealed that Quercetintrihexose
was found to have good binding energy (-2249.565) and
compared to other bioactive constituents -1103.765, -
1246.712, -2248.197 and -1208.262 a.u. The HF methods of
calculationofbindingenergyshowedthatQuercetintrihexose
was found to be good binding energy as-2236.484compared
to other bioactive compounds -1097.322, -1237.661, -
2234.96 and -1199.778. The above computation of binding
energy showedthatfivebioactivecompoundsselectedforthe
above work Quercetintrihexose to have a good binding
energy.
REFERENCES
[1] KavithaSama, Xavier vergeese raja A. Preliminary
phytochemical screening of root bark of delonixregia,
IRJP 2011; 2(10), 42-43.
[2] Hamdoon Mohammed. Natural and synthetic flavonoid
derivatives with potential antioxidant and anticancer
activities. UniversityofSaarland,Saarbrücken,Germany,
retervied on January 1, 2012.
[3] Joy P.P., Mathew J.S., SkariaB.P. Medicinal plants. Trop.
Horticult. 2001; 2, 449-632.
[4] Jyothi M.V., Mandayan S.N., Kotamballi N.C.,
BhagyalakshmiN. Antioxidative efficacies of floral petal
S. No
Compounds
name
Basis sets
STO-3G 3-21G 6-31G
1. Quercetin -1089.641 -1098.001 -1103.765
2. Epilupeol -1231.708 -1240.293 -1246.712
3. Quercetintrih
exose
-2220.678 -2237.858 -2249.565
4. Isorhamnetolr
hamnosyl-
hexoside
-2219.277 -2236.520 -2248.197
5. Stigmasterol -1193.828 -1202.024 -1208.262
S. No
Compounds
name
Basis sets
STO-3G 3-21G 6-31G
1. Quercetin -1083.665 -1091.672 -1097.322
2. Epilupeol -1223.366 -1231.488 -1237.661
3. Quercetintrih
exose
-2208.715 -2225.029 -2236.484
4. Isorhamnetolr
hamnosyl-
hexoside
-2207.189 -2223.548 -2234.96
5. Stigmasterol -1185.917 -1193.650 -1199.778
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395 -0056
Volume: 04 Issue: 03 | Mar -2017 www.irjet.net p-ISSN: 2395-0072
© 2017, IRJET | Impact Factor value: 5.181 | ISO 9001:2008 Certified Journal | Page 1563
extracts of Delonix regia Rafin.; Int. J. Biomed.
Pharmaceut. Sci. 2007; 1: 73-82.
[5] Sammour R. H., El-ShanshouryA.E.R..Botanical Bulletin
of Academia Sinica (Taipei). 1992; 33: 185.
[6] Felix Adje, Yves F. Lozano et.al Anthocyanin
Characterization of Pilot Plant Water Extracts of
Delonixregia Flowers, mdpi.org/Molecules 2008, 13,
1238-1245.
[7] G.Valli* & M.Suganya Evaluation of Stability of the
Medicinally important compounds in Vitex Negundo
plant by DFT method International Journal of
PharmTech ResearchVol.8, No.1, 2015 pp 20-23.
[8] G.Valli* & M.Suganya computation of binding energy of
bioactive constituents present in cassia fistula species
by DFT approach2015; 119-125.
[9] M.Suganya & R.Bhackyalakshmi DFT Calculations and
Insilico Drug Activity Predictions for few Bioactive
Compounds J.Bio.Innov 5(4), pp: 574-579, 2016.
[10] M.Suganya, K.Nithya, D.Bala Abarana & G.Swarnalatha
International Research Journal of Engineering and
Technology (IRJET) Vol:04 Issue:01, Mar-2017.

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DFT Calculations and Insilico Drug Activity Predictions for The Bioactive Constituent Present in Delonix Regia Plant

  • 1. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395 -0056 Volume: 04 Issue: 03 | Mar -2017 www.irjet.net p-ISSN: 2395-0072 © 2017, IRJET | Impact Factor value: 5.181 | ISO 9001:2008 Certified Journal | Page 1561 DFT calculations and insilico drug activity predictions for the Bioactive constituent present in Delonix regia Plant M.Suganya1, G.Swarnalatha 2,D.Bala Abarna3 & S.Devi Meenakshi4 1Assistant Professor of Chemistry 2Lecturer in Chemistry 3Assistant Professor of Physics HOD and 4Assistant Professor of Chemistry Department of Chemistry and Physics Nadar Saraswathi College of Arts and Science, Theni. ---------------------------------------------------------------------***--------------------------------------------------------------------- Abstract - Medicinal important compounds like Quercetin, Epilupeol, Quercetintrihexose, Isorhamnetolrhamnosyl-hexoside and Stigmasterol were selected for their stability determination via binding energy calculation. The binding energy of these were determined by the Gaussian software 5.0. DFT were accomplished B3LYPand HF methods using three basis set be found of STO-3G, 3-21G, 6- 31G. The DFT calculations of binding energy proved that Quercetin trihexose was recognized to be more stable among other four compounds. Binding energybySTO-3G (-2220.678), 32-1G (-2237.858) and 63-1G (-2249.565) were observed by B3LYP method. HF method binding energies were found to be STO-3G (-2208.715), 32-1G (-2225.029) and 63-1G (- 2236.484). These results showed that among the medicinal compounds present in the Delonix regia plant, Quercetin trihexose was found to have very good binding energy. Because of its good binding energy and stability it may find as potential medicine for the treatment of disease. Key Words: Delonix regia plant, DFT, B3LYP and HF. 1.INTRODUCTION Delonixregia plant with orange-red flowers belongs to the family of Ceasalpiniaceae, also known as Gulmohar royal Poinciana regia or Flamboyant [1]. The extract of Delonixregia is known to have medicinal properties.This plant isused in several countries to prepare extracts with antimicrobial and antifungal activities [2-5]. The Delonixregia plant is used in medicine as antiviral, anti- inflammatory and cytotoxic activity [1]. This plant is used in several countries to prepare extracts withantimicrobial and antifungal activities and used as antibiotics [6]. Binding energies of eight medicinal compounds has been computed using the B3LYP and HF methods by DFT approach to predict the most stable drug. 2. Experimental Methods 2.1 Materials The medicinal important compounds presentin the Delonix regia plant were selected for our work from the literature [1-6] as given below the structures Quercetin, Epilupeol, Quercetintrihexose, Isorhamnetolrhamnosyl- hexoside and Stigmasterol in Figure.1-5. Fig -1: Quercetin Fig -2: Epilupeol Fig -3: Quercetin tihexose Fig -4:Isorhamnetinrhamnosyl- hexoside
  • 2. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395 -0056 Volume: 04 Issue: 03 | Mar -2017 www.irjet.net p-ISSN: 2395-0072 © 2017, IRJET | Impact Factor value: 5.181 | ISO 9001:2008 Certified Journal | Page 1562 Fig -5: Stigmasterol DFT Methods The structures of the constituents like Quercetin, Epilupeol, Quercetintrihexose, Isorhamnetolrhamnosyl- hexoside and Stigmasterol were drawn in GaussView5.0the binding energies were calculated by B3LYP and HF methods using three basis sets STO-3G, 3-21G, 6-31G [7-10]. The binding energy of the above compounds predicted byB3LYP and HF method were given in Table-I &Table-II. Table- 1 Binding energy of compounds in B3LYP method Table- 2 Binding energy of compounds in HF method Result and Discussion 2.2 DFT Calculation 2.2.1 B3LYP Method The binding energy calculation by using three basis sets (STO-3G, 3-21G & 6-31G) listed in Table- I showed the following result STO-3G The binding energy for the selected five compounds were found to be -1089.641, -1231.708,-2220.678,-2219.277and -1193.828a.u. and it was found thatQuercetintrihexosehave good binding energy. 3-21G From above compounds were found to be Quercetintrihexose havea goodbindingenergyas -2237.858 a.u among the other bioactive constituentsusing3-21Gbasis sets, other compounds binding energies were found to be - 1098.001, -1240.293, -2236.520 and -1202.024 a.u. 6-31G The binding energies of the above five compounds by 6-31G basis sets were found to be -1103.765,-1246.712,-2248.197 and -1208.262 a.u. From the above data it was ended with the intention of Quercetintrihexosewasfoundtohavea good binding energy as-2249.565a.u. among the other bioactive constituents. 2.2.1 HF Method The binding energycalculatedtotheabovecompoundsgiven in Table- II for the three basis sets. The binding energy calculated by STO-3G basissetswere-1083.665,-1223.366,- 2208.715, -2207.189 and -1185.917a.u for Quercetin, Epilupeol, Quercetintrihexose, Isorhamnetol rhamnosyl- hexoside and Stigmasterol compounds. 321-G basis sets predicted -1091.672, -1231.488,-2225.029,-2223.548and - 1193.650a.u. 6-31G basissetsshowed-1097.322,-1237.661, -2236.484, -2234.96, and -1199.778 a.u. as binding energies for the above compounds as given in the same order. 3. CONCLUSIONS The binding energy of five bioactive constituents were calculated by B3LYP and HF method using STO-3G, 3-21G & 6-31G. The B3LYP method revealed that Quercetintrihexose was found to have good binding energy (-2249.565) and compared to other bioactive constituents -1103.765, - 1246.712, -2248.197 and -1208.262 a.u. The HF methods of calculationofbindingenergyshowedthatQuercetintrihexose was found to be good binding energy as-2236.484compared to other bioactive compounds -1097.322, -1237.661, - 2234.96 and -1199.778. The above computation of binding energy showedthatfivebioactivecompoundsselectedforthe above work Quercetintrihexose to have a good binding energy. REFERENCES [1] KavithaSama, Xavier vergeese raja A. Preliminary phytochemical screening of root bark of delonixregia, IRJP 2011; 2(10), 42-43. [2] Hamdoon Mohammed. Natural and synthetic flavonoid derivatives with potential antioxidant and anticancer activities. UniversityofSaarland,Saarbrücken,Germany, retervied on January 1, 2012. [3] Joy P.P., Mathew J.S., SkariaB.P. Medicinal plants. Trop. Horticult. 2001; 2, 449-632. [4] Jyothi M.V., Mandayan S.N., Kotamballi N.C., BhagyalakshmiN. Antioxidative efficacies of floral petal S. No Compounds name Basis sets STO-3G 3-21G 6-31G 1. Quercetin -1089.641 -1098.001 -1103.765 2. Epilupeol -1231.708 -1240.293 -1246.712 3. Quercetintrih exose -2220.678 -2237.858 -2249.565 4. Isorhamnetolr hamnosyl- hexoside -2219.277 -2236.520 -2248.197 5. Stigmasterol -1193.828 -1202.024 -1208.262 S. No Compounds name Basis sets STO-3G 3-21G 6-31G 1. Quercetin -1083.665 -1091.672 -1097.322 2. Epilupeol -1223.366 -1231.488 -1237.661 3. Quercetintrih exose -2208.715 -2225.029 -2236.484 4. Isorhamnetolr hamnosyl- hexoside -2207.189 -2223.548 -2234.96 5. Stigmasterol -1185.917 -1193.650 -1199.778
  • 3. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395 -0056 Volume: 04 Issue: 03 | Mar -2017 www.irjet.net p-ISSN: 2395-0072 © 2017, IRJET | Impact Factor value: 5.181 | ISO 9001:2008 Certified Journal | Page 1563 extracts of Delonix regia Rafin.; Int. J. Biomed. Pharmaceut. Sci. 2007; 1: 73-82. [5] Sammour R. H., El-ShanshouryA.E.R..Botanical Bulletin of Academia Sinica (Taipei). 1992; 33: 185. [6] Felix Adje, Yves F. Lozano et.al Anthocyanin Characterization of Pilot Plant Water Extracts of Delonixregia Flowers, mdpi.org/Molecules 2008, 13, 1238-1245. [7] G.Valli* & M.Suganya Evaluation of Stability of the Medicinally important compounds in Vitex Negundo plant by DFT method International Journal of PharmTech ResearchVol.8, No.1, 2015 pp 20-23. [8] G.Valli* & M.Suganya computation of binding energy of bioactive constituents present in cassia fistula species by DFT approach2015; 119-125. [9] M.Suganya & R.Bhackyalakshmi DFT Calculations and Insilico Drug Activity Predictions for few Bioactive Compounds J.Bio.Innov 5(4), pp: 574-579, 2016. [10] M.Suganya, K.Nithya, D.Bala Abarana & G.Swarnalatha International Research Journal of Engineering and Technology (IRJET) Vol:04 Issue:01, Mar-2017.