Maternal effects are the influences of a mothers genotype on the phenotype of her offspring. It results from the asymmetric contribution of the female parent to the development of zygotes.
In terms of chromosomal genes, both male and female parents contribute equally to the zygote. The female parent contributes to the zygotes initial cytoplasm and organelles. Sperm rarely contribute anything other than chromosomes. Therefore zygotic development begins within a maternal medium and hence the maternal cytoplasm directly affects zygotic development.
It is the fundamental law of population genetics and provides the basis for studying Mendelian populations ( Mendelian population: A group of sexually inbreeding organisms living within a circumscribed area). It describes populations that are not evolving.
According to Hardy (England,1908) and Weinberg (Germany,1909), gene and genotype frequency of a Mendelian population remain constant generation after generation unless there is selection,mutation,migration or random drift.
Maternal effects are the influences of a mothers genotype on the phenotype of her offspring. It results from the asymmetric contribution of the female parent to the development of zygotes.
In terms of chromosomal genes, both male and female parents contribute equally to the zygote. The female parent contributes to the zygotes initial cytoplasm and organelles. Sperm rarely contribute anything other than chromosomes. Therefore zygotic development begins within a maternal medium and hence the maternal cytoplasm directly affects zygotic development.
It is the fundamental law of population genetics and provides the basis for studying Mendelian populations ( Mendelian population: A group of sexually inbreeding organisms living within a circumscribed area). It describes populations that are not evolving.
According to Hardy (England,1908) and Weinberg (Germany,1909), gene and genotype frequency of a Mendelian population remain constant generation after generation unless there is selection,mutation,migration or random drift.
Inability of a plant with functional pollen to set seed when self-pollinated.
Hindrance to self-fertilization.
Prevents inbreeding and promotes outcrossing.
Reported in about 70 families of angiosperms including crop species.
A general account of Quantitative (Multiple factor or Polygenic) Inheritance; Examples : Kernel colour in Wheat, Ear size (Cob length ) in Maize(Zea mays) ; Differences between Qualitative and Quantitative Inheritance
Introduction :
Mendel and subsequent workers assumed that a character was governed by a single gene.
But it was later discovered that many characters in almost all the organisms are governed by two or more genes. Such gene affect the development of concerned characters in various ways.
The phenomenon of two or more gene affecting the expression of each other in various ways in the development of a single character of on organism is known as gene interaction.
This PPT consists of 15 slides only explaining Pleiotropy. This is a phenomenon when one gene controls more than one trait , the traits may be related .Generally one gene's product acts for many reactions and so can affect more than one trait. Examples can be seen in pea Coloured flower and pigmentation in leaf axil, frizzle trait in chicken, fur colour and deafness in cats,Human pleiotropic traits are PKU,Sickle cell Anaemia. HOsyndrome , p53 gene etc
Inheritance due to genes located in cytoplasm is called cytoplasmic inheritance.
Since genes governing traits showing cytoplasmic inheritance are located outside the nucleus and in the cytoplasm, they are referred to as plasmagenes.
Inability of a plant with functional pollen to set seed when self-pollinated.
Hindrance to self-fertilization.
Prevents inbreeding and promotes outcrossing.
Reported in about 70 families of angiosperms including crop species.
A general account of Quantitative (Multiple factor or Polygenic) Inheritance; Examples : Kernel colour in Wheat, Ear size (Cob length ) in Maize(Zea mays) ; Differences between Qualitative and Quantitative Inheritance
Introduction :
Mendel and subsequent workers assumed that a character was governed by a single gene.
But it was later discovered that many characters in almost all the organisms are governed by two or more genes. Such gene affect the development of concerned characters in various ways.
The phenomenon of two or more gene affecting the expression of each other in various ways in the development of a single character of on organism is known as gene interaction.
This PPT consists of 15 slides only explaining Pleiotropy. This is a phenomenon when one gene controls more than one trait , the traits may be related .Generally one gene's product acts for many reactions and so can affect more than one trait. Examples can be seen in pea Coloured flower and pigmentation in leaf axil, frizzle trait in chicken, fur colour and deafness in cats,Human pleiotropic traits are PKU,Sickle cell Anaemia. HOsyndrome , p53 gene etc
Inheritance due to genes located in cytoplasm is called cytoplasmic inheritance.
Since genes governing traits showing cytoplasmic inheritance are located outside the nucleus and in the cytoplasm, they are referred to as plasmagenes.
It is a powerpoint presentation that discusses about the lesson or topic: Non-Mendelian Inheritance. It also talks about the definition, history and the laws included in the Non-Mendelian Inheritance or Non-Mendelian Genetics.
Cytoplasmic inheritance and extra chromosomal inheritanceJs Mn
the cytoplasmic inheritance is in which cytoplasm contain self replicating hereditary material of cytoplasm formed of DNA and this DNA govern many specific characters in plants and animals.
In 1950 Dr. Sangers and his colleagues suggested the possible role of cytoplasm in
certain cases of inheritance .
Example – in Chlamydomonas inheritance of certain characters is controlled by the
non-chromosomal genes.
• The cytoplasm in such cases contains self-perpetuating hereditary particles
formed of DNA. These may be mitochondria, plastids or foreign organisms etc.
• The total self-duplicating hereditary material of cytoplasm is called plasmon and
the cytoplasm units of inheritance are described as plasmagenes.
• Plasmagenes are located in DNA present in mitochondria and in chloroplast.
Non mendelian inheritance / cytoplasmic inheritance / Extranuclear InheritanceMahammed Faizan
Inheritance of traits from parents to off springs from cytoplasmic organelle genetic material is known as extra nuclear inheritance.
it is mainly responsible due to DNA present in cytoplasmic organelle.
total genes present in cytoplasm is know as as plasmon.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
2. In mendelian inheritance
The contribution of both male and female is equal, so,
the reciprocal crosses are identical.
The segregation produces 3:1 ratio in F1 monohybrid and
9:3:3:1 in F2 dihybrid.
The gene showing the mendelian inheritance are located
on chromosomes of nuclei.
3. In non mendelian inheritance
The reciprocal cross gives different results.
The trait onlyfrom the female parent is transmitted in to
next generation (Because the cytoplasm is usually
contributed entirely by one parent).
Nuclear genes can be easily mapped on chromosomes,
but it is difficult to map cytoplasmic genes or prepare
linkage map for such genes.
There is no segregation F2 generation. So, the non
mendelian inheritance are divided in to two categories:
Maternal Effects
Extra nuclear inheritance / Cytoplasmic inheritance
4. The evidence of cytoplasmic inheritance was first
presented by Correns in mirablis jalapa.
In 1943, Sonnenborn discovered kappa particles in
paramecium and they are inherited through cytoplasm.
In extra nuclear inheritance the trait or character of
female parent is only transmitted to the progeny. The
reciprocal crosses exhibit difference in phenotypes of
progeny and there is no segregation of gene in F2
generation. Such type of inheritance is called as
cytoplasmic inheritance, extra chromosomal
inheritance and maternal inheritance.
5. The genes governing the characters showing non
mendelian inheritance are located outside of nucleus and
found in cytoplasm, these genes are called as plasma
genes or cytoplasmic genes or cytogenes or
extranuclear genes or extrachromosomal genes.
The total gene present in the cytoplasm of a cell or an
individual is known as Plasmon, while all genes in plastid
called as plastome.
The genes present in the mitochondria called as
chondriome.
The mitochondrial genes are abbreviated as mt DNA and
the chloroplast genes are abbreviated as cp DNA.
6. Sr. Mendelian inheritance Non mendelian inheritance
1 Governed by nuclear genes. Governed by plasma genes.
2 Distinct segregation pattern. No distinct segregation.
3 Reciprocal differences not
observed.
Reciprocal differences
observed.
4 Does not show maternal
effects.
Shows maternal effects.
5 Genes can be easily mapped on
chromosomes.
Mapping of plasma genes is
very difficult.
7. Examples for Non mendelian inheritance
Plastid inheritance in Mirabilis
Shell coiling in snail
Kappa partcles in Paramecium
Cytoplasmic male sterility in maize
Sigma virus in Drosophila melanogaster
Milk factor in mice
Classes of Non mendelian Inheritance
There are three different classes:
Maternal Effects
Inheritance Involving Infective Particles
Cytoplasmic Inheritance
8. When the expression of a character is influenced by the
genotype of female parent, it is referred to as maternal
effect.
Such characters exhibit clear cut differences in F1 for
reciprocal crosses.
Example: Coiling Pattern of Shell in Snail (Lymnea
Peregra)
Two types of coiling pattern - right handed (dextral)
(clockwise) and left handed (sinistral) (anticlockwise).
9. The dextral coiling: dominant allele D and
sinistral by recessive allele d
Dextral coiling female X Sinistral coiling male
All F1 and F2 progenies are of dextral type coiling.
However, in F3 generation 3 dextral and 1 sinistral types
of coiling observed.
In reciprocal cross,
Sinistral coiling female X Dextral coiling male,
All F1 progenies have sinistral coiling pattern but
in F2 generation all progenies have dextral coiling pattern.
However, in F3 3 dextral and 1 sinistral types of coiling
observed.
This indicates that the inheritance of coiling direction in
water snail depends on the genotype of female parent
and not on its own genotype.
10.
11. The F1 progeny from both the crosses had the same
genotype, Dd but they showed the different phenotypes.
The phenotype of offspring by the mother’s genotype for
coiling.
When F1 undergo for self fertilization the F2 offspring
from both the crosses, irrespective of their own
genotypes, showed the same phenotype (Dextral).
The true nature of inheritance of coiling is indicated when
each F2 individual undergoes for self fertilization to
produce F3. In F3, 3 dextral and 1 sinistral types of
coiling observed and therefore this pattern of inheritance
is also called as delayed mendelian inheritance.
12. “Phenotype of progeny exclusively depends on the
genotype of mother irrespective of the offspring’s own
genotype. Thus the ‘DD’ and ‘Dd’ mothers produce
dextral progeny while, ‘dd’ mother always produce
sinistral progeny”.
13. In some cases, Non mendelian inheritance is associated
with infective particles like parasite, symbiont or viruses
which are present in the cytoplasm of an organism.
However, such cases are not considered as true
examples of cytoplasmic inheritance.
Examples: Kappa Particles in Paramecium and Sigma
Particle in Drosophila
T. M. Sonneborn described the inheritance of some
cytoplasmic particles known as kappa in Paramecium
aurelia.
There are two strains of Paramecium: killer and sensitive.
14. Killer strain produces a toxic substance called paramecin
that is lethal to other individuals called "sensitives" . The
production of paramecin in killer type is controlled by
certain cytoplasmic particles known as kappa particles.
The sensitive strains lack these particles.
The kappa particles are transmitted through the
cytoplasm. The existence, production and maintenance
of kappa particles are controlled by a dominant gene ‘K’
present in the nucleus. However, ‘K’ cannot initiate the
production of kappa in the total absence of kappa in the
cytoplasm.
15. When a Paramecium of killer strain is having the
genotype “KK” or (K+) conjugates with the Paramecium
of non-killer strain having the genotype “kk”, the
exconjugants are all heterozygous for “Kk” genes.
The development of a particular type depends upon the
duration of cytoplasmic exchange If conjugation is
normal, i.e., lasts only for a short time, and no exchange
of cytoplasm takes place between the two, both killers
and non-killers (sensitive) are produced.
However in rare or prolonged conjugation in addition to
the nuclear material, the cytoplasmic materials are also
exchanged.
16. During this cytoplasmic exchange, the kappa particles
present in the cytoplasm of the killer type enter the non-
killer type and convert it into a killer type. So all the
offspring produced by the exconjugants are killer type.
17. There are two types of cytoplasmic inheritance:
(1) plastid inheritance
(2) mitochondrial inheritance.
The first example of cytoplasmic inheritance was
reported by Correns (1909) in a variegated variety of the
four-o'clock plant Mirabilis jalapa.
Variegated plants have some branches which carry
normal green leaves, some branches with variegated
leaves (mosaic of green and white patches) and some
branches which have all white leaves.
18. Flowers on wholly green branches produce seeds that
grow into normal plants.
Flowers on variegated branches yield offspring of three
kinds- green, white and variegated in variable
proportions.
Flowers from branches wholly white produce seeds that
grow into white plants that is without chlorophyll.
The phenotype of the progeny always resembled the
female parent and the male made no contribution at all to
the character. So cytoplasm of the egg influences the
type of leaf in Mirabilis.
19. The explanation for this unusual pattern of inheritance is
that the genes concerned are located in the plastids
within the cytoplasm, not in the nucleus and are therefore
transmitted only through the female parent.
Plastids are of two types, namely green chloroplasts and
colourless leucoplasts.
Green branches contain Green plastids in their leaves .
Variegated branches contain Green plastids and
Colourless plastids.
Colourless branches are due to the presence of
Colourless plastids.