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Enzyme Inhibition
Prof. (Dr.) V.P. Acharya
All things are difficult before they
are easy.
Thomas Fuller
Many different kinds of molecules inhibit
enzymes and act in a variety of ways
Enzyme inhibition
Competitive
Non-competitive
Reversible Irreversible
Uncompetitive
Suicide
Allosteric
Feedback
Competitive inhibition
• Inhibitor competes with the substrate for the active site
• Inhibitor is substrate analogue
• Usually reversible
• ↑ [S] abolishes inhibition
• ↓ velocity of reaction
• ↑ Km
• Vmax unchanged
COMPETITIVE
INHIBITION
Clinical significance
• Sulfonamide– structural analogue of PABA
(PABA with pteroyl glutamic acid synthesises
Folic acid)
• Methotrexate -- structural analogue of folic
acid
↓
Inhibits folate reductase
↓
↓DNA synthesis & cell division
↓
Death of cancer cells
• INH– Similar structure to pyridoxal
↓
Pyridoxal deficiency
↓
Peripheral neuropathy
• Methanol↔ Ethanol
• Allopurinol↔ Xanthine oxidase
• Dicoumarol ↔ Vit. K epoxide reductase
↓
Act as anticoagulant
Non-competitive inhibition
• No competition between substrate and
inhibitor
• Different binding sites
• No structural similarities
• ↑ [S] doesn’t resolve the inhibition
• Usually irreversible
• May be reversible when inhibitor is
removed
• Km value unchanged
• Vmax reduces
Noncompetitive inhibition
Clinical significance
• Cyanide inhibits cytochrome oxidase
• F inhibits enolase- removes Mn & Mg
• Heavy metals react with –SH gr. Of BAL-
hence BAL is used in heavy metal poisoning
Toxicological importance
• Most of the poisons- Irreversible NC
inhibitors- iodoacetate, heavy metal poisons
Reversible non-competitive inhibition
Inhibition is reversible if inhibitor is removed
Ex:
Ascaris and soybean are trypsin inhibitors
Ab prepared against any enzyme
precipitates it
Competitive Vs Non-competitive
inhibition
Competitive
inhibition
Non-competitive
inhibition
Act on Active site May/may not be
Str of inhibitor Substrate analogue Not an analogue
Reversibility Reversible Mostly irreversible
↑ Substrate Inhibition relieved No effect
Km ↑ No change
Vmax Unchanged ↓
Significance Drug action Toxicological
Uncompetitive inhibition
• Inhibitor binds to the ES complex, not to the free
enzyme
• ↓ Vmax, ↓ Km
Ex: Inhibition of
placental ALP by
Phenylalanine
Suicide inhibition
• A substrate analogue binds to the enzyme
↓
First few steps of the pathway are catalyzed
↓
New product irreversibly binds to the enzyme
↓
Enzyme inhibited
• Irreversible reaction
Ex:
Allopurinol Xanthine oxidase Alloxanthine
• Difluoromethyl ornithine (DFMO) inhibits ornithine
decarboxylase in Trypanosoma
• Purine and Pyrimidine analogues in cancer
chemotherapy
• Aspirin inhibits COX enzyme
(-)
not failed. I've just found 10,000 ways that won't w
Thomas A. Edison
Allosteric inhibition
• Allos= Different; Steric = site
• Different sites for substrate and modifier binding
• Effectors or modifiers bind covalently
• Most of the hormone action
• Mostly multimeric enzymes; hence co-operative
binding
• Binding of modifier– changes configuration of
active site– release the substrate
• Catalytic and allosteric sites may not lie closely
• Inhibitor is not a substrate analogue
• Partially reversible; excess substrate
may reverse the reaction
• ↑ Km
• ↓Vmax
• Effect of modifier is maximum when
[s]≈ Km
Allosteric inhibition
Allosteric activation
Homotropic effector: If substrate acts as allosteric
effector- presence of the substrate molecule will
enhance activity of other substrate-binding sites-
sigmoid curve
Heterotropic effector: If substrate and effectors are
different- commonly encountered
Key Enzyme:
Usually allosteric enzymes are regulatory enzymes/
key enzymes / Rate limiting enzyme
Succinyl CoA+ Glycine → Delta ALA
Heme (Allosterically inhibits ALA
synthase)
(-)
ALA Synthase
• Fine control : Enzyme activity is regulated
by altering existing enzyme activity
• Coarse control: Enzyme activity is
regulated by altering concentration of
enzymes
Feedback Inhibition
• End-product inhibits the enzyme
• Usually allosteric inhibition
Covalent modification
By addition or removal of a group to the enzyme
protein by covalent bond
Ex: Zymogen activation
Phosphorylation & dephosphorylation
Methylation
Uridylation
Adenylation & deadenylation
Induction
Inducer
↓
Relieve repression at the operator site
↓
Biosynthesis of enzyme starts
Constitutive enzyme– Independent of
inducer
Ex: Lac operon
Glucokinase induced by glucose
Repression
• Acts at molecular level, on genes
• Effect is noticed after a lag period of hours
and days
• ↓ no. of enzyme molecules
Ex: ALA synthase is regulated by heme by
repression
Genetic Engineering & Modified Enzyme
• Hybrid enzymes/ Chimeric enzymes/Fusion
proteins: Fusion of 2 or more enzymes having
desired properties
• Abenzymes / Catmab: Enzymes+ monoclonal
antibodies
Treatment for autoimmune diseases, HIV
Non-protein enzymes
• Ribonuclease P (1983)
 Found to have true enzyme activity
 Obeyed M-M equation
Name the other ribozymes??
Walking with a friend in the dark is better than
walking alone in the light.
Helen Keller
5 enzyme inhibition

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5 enzyme inhibition

  • 2. All things are difficult before they are easy. Thomas Fuller
  • 3.
  • 4. Many different kinds of molecules inhibit enzymes and act in a variety of ways Enzyme inhibition Competitive Non-competitive Reversible Irreversible Uncompetitive Suicide Allosteric Feedback
  • 5. Competitive inhibition • Inhibitor competes with the substrate for the active site • Inhibitor is substrate analogue • Usually reversible • ↑ [S] abolishes inhibition • ↓ velocity of reaction • ↑ Km • Vmax unchanged
  • 7. Clinical significance • Sulfonamide– structural analogue of PABA (PABA with pteroyl glutamic acid synthesises Folic acid) • Methotrexate -- structural analogue of folic acid ↓ Inhibits folate reductase ↓ ↓DNA synthesis & cell division ↓ Death of cancer cells
  • 8. • INH– Similar structure to pyridoxal ↓ Pyridoxal deficiency ↓ Peripheral neuropathy • Methanol↔ Ethanol • Allopurinol↔ Xanthine oxidase • Dicoumarol ↔ Vit. K epoxide reductase ↓ Act as anticoagulant
  • 9.
  • 10. Non-competitive inhibition • No competition between substrate and inhibitor • Different binding sites • No structural similarities • ↑ [S] doesn’t resolve the inhibition • Usually irreversible • May be reversible when inhibitor is removed • Km value unchanged • Vmax reduces
  • 11.
  • 13. Clinical significance • Cyanide inhibits cytochrome oxidase • F inhibits enolase- removes Mn & Mg • Heavy metals react with –SH gr. Of BAL- hence BAL is used in heavy metal poisoning Toxicological importance • Most of the poisons- Irreversible NC inhibitors- iodoacetate, heavy metal poisons
  • 14. Reversible non-competitive inhibition Inhibition is reversible if inhibitor is removed Ex: Ascaris and soybean are trypsin inhibitors Ab prepared against any enzyme precipitates it
  • 15. Competitive Vs Non-competitive inhibition Competitive inhibition Non-competitive inhibition Act on Active site May/may not be Str of inhibitor Substrate analogue Not an analogue Reversibility Reversible Mostly irreversible ↑ Substrate Inhibition relieved No effect Km ↑ No change Vmax Unchanged ↓ Significance Drug action Toxicological
  • 16. Uncompetitive inhibition • Inhibitor binds to the ES complex, not to the free enzyme • ↓ Vmax, ↓ Km Ex: Inhibition of placental ALP by Phenylalanine
  • 17. Suicide inhibition • A substrate analogue binds to the enzyme ↓ First few steps of the pathway are catalyzed ↓ New product irreversibly binds to the enzyme ↓ Enzyme inhibited • Irreversible reaction
  • 18. Ex: Allopurinol Xanthine oxidase Alloxanthine • Difluoromethyl ornithine (DFMO) inhibits ornithine decarboxylase in Trypanosoma • Purine and Pyrimidine analogues in cancer chemotherapy • Aspirin inhibits COX enzyme (-)
  • 19. not failed. I've just found 10,000 ways that won't w Thomas A. Edison
  • 20. Allosteric inhibition • Allos= Different; Steric = site • Different sites for substrate and modifier binding • Effectors or modifiers bind covalently • Most of the hormone action • Mostly multimeric enzymes; hence co-operative binding • Binding of modifier– changes configuration of active site– release the substrate • Catalytic and allosteric sites may not lie closely • Inhibitor is not a substrate analogue
  • 21. • Partially reversible; excess substrate may reverse the reaction • ↑ Km • ↓Vmax • Effect of modifier is maximum when [s]≈ Km
  • 23.
  • 24. Homotropic effector: If substrate acts as allosteric effector- presence of the substrate molecule will enhance activity of other substrate-binding sites- sigmoid curve Heterotropic effector: If substrate and effectors are different- commonly encountered Key Enzyme: Usually allosteric enzymes are regulatory enzymes/ key enzymes / Rate limiting enzyme Succinyl CoA+ Glycine → Delta ALA Heme (Allosterically inhibits ALA synthase) (-) ALA Synthase
  • 25. • Fine control : Enzyme activity is regulated by altering existing enzyme activity • Coarse control: Enzyme activity is regulated by altering concentration of enzymes
  • 26. Feedback Inhibition • End-product inhibits the enzyme • Usually allosteric inhibition
  • 27. Covalent modification By addition or removal of a group to the enzyme protein by covalent bond Ex: Zymogen activation Phosphorylation & dephosphorylation Methylation Uridylation Adenylation & deadenylation
  • 28. Induction Inducer ↓ Relieve repression at the operator site ↓ Biosynthesis of enzyme starts Constitutive enzyme– Independent of inducer Ex: Lac operon Glucokinase induced by glucose
  • 29. Repression • Acts at molecular level, on genes • Effect is noticed after a lag period of hours and days • ↓ no. of enzyme molecules Ex: ALA synthase is regulated by heme by repression
  • 30. Genetic Engineering & Modified Enzyme • Hybrid enzymes/ Chimeric enzymes/Fusion proteins: Fusion of 2 or more enzymes having desired properties • Abenzymes / Catmab: Enzymes+ monoclonal antibodies Treatment for autoimmune diseases, HIV
  • 31. Non-protein enzymes • Ribonuclease P (1983)  Found to have true enzyme activity  Obeyed M-M equation Name the other ribozymes??
  • 32. Walking with a friend in the dark is better than walking alone in the light. Helen Keller

Editor's Notes

  1. Heavy metals act on –sH gr of enzymes. BAL has many –SH gr and hence heavy metals bind to them and poisoning effects reduced
  2. ODC catalyses the conversion of ornithine to putrescine in polyamine synthesis. Aspirin acetylates Ser residue in the active centre of COX, thus PG synthesis inhibited.