SlideShare a Scribd company logo
Data Compression Page | 2
The Burrows-Wheeler Algorithm
1. Introduction
The Burrows-Wheeler Algorithm was published in the year 1994 by Michael
Burrows and David Wheeler in the research report “A Block-sorting Lossless
Data Compression Algorithm". The algorithm consists of several stages and
thesestagesareperformedsuccessively.Theinput andoutput of each stages
are blocks of arbitrary size, butthesizemustbe specified at the beginning of
the whole compression process. With the decompression of the algorithm
the data which compressedbythealgorithmcan be returned to their original
data. Meanwhile, there are countless different versions of the algorithm.
2. Structure of the Burrows-Wheeler Algorithm
The original algorithm consists of three stages:
 The firststageof the algorithmisthe Burrows-WheelerTransform.Theaim
of the first stage is to sortthe characters of the input with the result that
identical characters are close together, or better to sequences of identical
characters.
Figure 1: Structure ofthe Burrows-WheelerAlgorithm
Data Compression Page | 3
 The second stage of the algorithm is the Move-To-FrontTransform. In this
stage, the characters of the input, which are still in a local context, get
assigned a global index value. Thereby, the characters, which occurs more
frequently in the input get a lower index value as the less frequently,
characters. It must be mentioned at this point that the first two stages of
the algorithm do not compress the data, but the stages transformed the
data with the result that they can be compressed better in the following
third stage.
 The thirdstage of the algorithmis the Entropy Coding. Inthis stage, the real
compression of the data takes place. Normally, the Huffman coding or the
Zero Run-Length Coding is used as entropy coder.
2.1Burrows-Wheeler Transform
The aim of the Burrows-Wheeler Transformis to sortthe characters of the
input with the resultthat identical characters are close together. Now we
look detailed at the technique of the Burrows-Wheeler Transform.
Process steps:
1. Ordertheinputn (nis the lengthoftheinput)times amongthemselves,therebyrotate
each row one character to the right compared to the previous row
2. Sort the rows lexicographical
The outputof this stage is the L-column (we call L-column for the lastcolumnandF-column
for thefirstcolumnofthesortedmatrix) andtheindexvalueofthesortedmatrixthatcontains
the original input.
Data Compression Page | 4
Now we explain the procedure step by step with as example input.
Step 1:
Index F-column L-column
0 P A N A M A
1 A P A N A M
2 M A P A N A
3 A M A P A N
4 N A M A P A
5 A N A M A P
Step 2:
Index F-column L-column
0 A M A P A N
1 A N A M A P
2 A P A N A M
3 M A P A N A
4 N A M A P A
5 P A N A M A
Output:
In the output, the identical charactersare close together as in the input. The
output of this stage is the input for the next stage, the Move-To-Front
Transform.
PANAMA
NPM AAA 5
Data Compression Page | 5
2.2Move-To-Front Transform
As mentioned previously, in this stage the characters of the input get
assigned a global index value. Therefore, we have in addition to the input a
global list Y . Normally, the global list Y containsall charactersof the ASCII-
Code in ascending order.
Now we explain the procedurestep by step with (output of
the example from the Burrows-Wheeler Transform) as example input. We
use Y = [A, M, N, P] as global list and do not a global list of all characters of
the ASCII-Code, because the example is better to present and easier to
understand with the smaller global list.
Process steps:
1. Save the index value of the global list Y which contains the firstcharacter of the
input
2. Move the saved character of the previous step in the globalliston index position
0 and move allcharacters one positionto the rightwhich arelocatedin the global
list before the old position of the saved character
3. Repeatstep 1 and 2 sequentially for the other characters of the inputand use for
all repetitions the modified global list from the previous repetition
The output of this stage consists of all saved index positions and the index value of the
sorted matrix from the Burrows-Wheeler Transform which contains the original input.
This index value will not processed in the Move-To-Front Transform.
NPM AAA 5
Data Compression Page | 6
Step 1:
Input: NPMAAA
Y = [A, M,N , P] ⇒ Save index position 2
Step 2:
Y = [A, M, N , P ] ⇒ Y = [N , A, M, P ]
Step 3:
Y = [N, A, M,P] ⇒ Save index position 3 ⇒ Y = [P , N, A, M ]
Y = [P, N, A, M ] ⇒ Save index position 3 ⇒ Y = [M , P, N, A]
Y = [M, P, N, A] ⇒ Save index position 3 ⇒ Y = [A, M,P, N ]
Y = [A, M,P, N ] ⇒ Save index position 0 ⇒ Y = [A, M, P, N ]
Y = [A, M, P, N] ⇒ Save index position 0 ⇒ Y = [A, M, P, N]
The output of this stage is the input for the next stage, the Entropy Coding
(Zero Run-Length Coding). We see in this example that characters which
occurs more frequently in the input get a lower index as the less frequently
characters.
However, the question is, which profit gives us the sequences of zeros and
which profitgives us the Move-To-FrontTransform? Below we present with
the Zero Run-Length Coding a simple compression method.
Data Compression Page | 7
2.3Zero Run-Length Coding
The Zero Run-Length Coding coded sequences of zeros to shorter strings.
Now we explain the technique of the Zero Run-Length Coding step by step:
233300 (output of the example from the Move-To-Front Transform) as
example input.
We seein our example that the length of the output is one character smaller
as the length of the input. For a larger input we can more profit from the
Zero Run-Length Coding, because for example, we can coded 6 zeros with
only 2 characters. At this point we see the profit of the Move-To-Front
Transform.
Example:
1. Increase allcharacters of the inputwhich are greater as 0 by 1
Input:233300 ⇒344400
2. Coding the sequences of zeros with string combinations of 0 and 1
We use atthis pointan example-coding table.
Number of zeros Coding string
1 0
2 1
3 00
4 01
5 10
6 11
344400 ⇒ Output: 34441
Data Compression Page | 8
3. Decompression and Move-To-Front Backtransform
During the decompression of thedata the stages of the algorithmwill be run
in the reverse order compared to the compression. Firstwe start with Zero
Run-Length decoding.
Example:
1. Decoding the sequences of codingstring with the number of zeros.
We use atthis pointan example-coding table.
Coding string Number of zeros
0 0
1 00
00 000
01 0000
10 00000
11 000000
2. Decrease allcharacters of the input, which are greater as 0 by 1
Input: 34441 ⇒Output:233300
Figure 2: Decompressionof the Burrows-WheelerAlgorithm
Data Compression Page | 9
The technique of the Move-To-FrontBacktransformis analog to the Move-
To-FrontTransformofthe compressionwith thedifferentthatwehaveindex
values instead of characters as input. In addition to the input we use the
same global list Y as also the Move-To-FrontTransformof the compression.
We use 233300 5 (output from the example of the Move-To-Front
Transform) as example input and the output for this example is NPMAAA 5 .
The outputof this stageis the inputfor the Burrows-WheelerBacktransform.
Process steps:
1. Save the character whichis located in the global listYon the firstindex value ofthe
input
2. Move the saved character ofthe previous step in the globallist on index position 0
and move all characters one positionto the rightwhich are located in the globallist
before the old position of the saved character
3. Repeatstep 1 and 2 sequentially for the other index values of the input and use for
all repetitions the modified global list from the previous repetition
The outputof this stage consists of all saved characters and the index value of the sorted
matrix from the Burrows-Wheeler Transform, whichcontains the originalinput. This index
value will not processed in the Move-To-Front Backtransform.
Data Compression Page | 10
Step 1:
Input: 233300
Y = [A, M,N , P] ⇒ Save index position 2
Step 2:
Y = [A, M, N , P ] ⇒ Y = [N , A, M, P ]
Step 3:
Y = [N, A, M,P] ⇒ Save index position 3 ⇒ Y = [P , N, A, M ]
Y = [P, N, A, M ] ⇒ Save index position 3 ⇒ Y = [M , P, N, A]
Y = [M, P, N, A] ⇒ Save index position 3 ⇒ Y = [A, M,P, N ]
Y = [A, M,P, N ] ⇒ Save index position 0 ⇒ Y = [A, M, P, N ]
Y = [A, M, P, N] ⇒ Save index position 0 ⇒ Y = [A, M, P, N]
Output is NPMAAA 5 .
Data Compression Page | 11
3.1Burrows-Wheeler Backtransform
The Burrows-WheelerBacktransformisthe mostcomplicated method of the
Burrows-Wheeler Algorithm. If we remember back, we know that the input
of the Burrows-Wheeler Backtransform is the L-column and the index value
of the sorted matrix from the Burrows-Wheeler Transform, which contains
the original input.
Process steps:
1. Sort the L-column of the input alphabetical ⇒ F-column
2. Save the character which is located in the F-column on the input index
3. Search index value i, whereby, iis the index value of the character in the L-column
which is identicalto the saved character ofthe previous step and this character has
the same number ofidenticalcharacters with lower index valuesin the L-column as
the saved character of the previous step in the F-column
4. Save the character which is located in the F-column on the index value i
5. Repeat step 3 and 4 and break off, when index value i is equal to the input index
The output of this stage consists of all saved characters.
Data Compression Page | 12
Now we explain the procedurestep by step with NPMAAA 5 (output of the
example from the Move-To-Front Backtransform) as example input.
Step 1:
Step 2:
Step 3:
Data Compression Page | 13
Step 4:
Step 5:
Output: PANAMA (original input)
Data Compression Page | 14
4. Conclusion
We have presented with the Burrows-Wheeler Algorithm a Stagebase-
Blocksorting algorithm that is used for the lossless data compression. We
looked at the structure and the several stages of compression and the
decompression,in whichthe stagesarerun in reverseordercompared to the
compression. Burrows-Wheeler Algorithm is very good especially by the
compression of text-based files. However, is worse for non-text-based files
compared to other common data compression methods.
Data Compression Page | 15
References
[1] M. Burrows and D.J. Wheeler: .A Block-sorting Lossless Data Compression
Algorithm., Digital Systems Research Center, Research Report 124, 1994.
[2] J. Abel: .Grundlagen des Burrows-Wheeler-Kompressionsalgorithmus., Informatik
- Forschung und Entwicklung, Springer Verlag, Vol. 18, Nr. 2, 2004.

More Related Content

What's hot

Video compression
Video compressionVideo compression
Video compression
DarkNight14
 
Forms of learning in ai
Forms of learning in aiForms of learning in ai
Forms of learning in ai
Robert Antony
 
Counterpropagation NETWORK
Counterpropagation NETWORKCounterpropagation NETWORK
Counterpropagation NETWORKESCOM
 
Lecture 15 monkey banana problem
Lecture 15 monkey banana problemLecture 15 monkey banana problem
Lecture 15 monkey banana problem
Hema Kashyap
 
Deep Learning Frameworks 2019 | Which Deep Learning Framework To Use | Deep L...
Deep Learning Frameworks 2019 | Which Deep Learning Framework To Use | Deep L...Deep Learning Frameworks 2019 | Which Deep Learning Framework To Use | Deep L...
Deep Learning Frameworks 2019 | Which Deep Learning Framework To Use | Deep L...
Simplilearn
 
The Wumpus World in Artificial intelligence.pptx
The Wumpus World in Artificial intelligence.pptxThe Wumpus World in Artificial intelligence.pptx
The Wumpus World in Artificial intelligence.pptx
JenishaR1
 
AI Lecture 3 (solving problems by searching)
AI Lecture 3 (solving problems by searching)AI Lecture 3 (solving problems by searching)
AI Lecture 3 (solving problems by searching)
Tajim Md. Niamat Ullah Akhund
 
Artificial Neural Networks-Supervised Learning Models
Artificial Neural Networks-Supervised Learning ModelsArtificial Neural Networks-Supervised Learning Models
Artificial Neural Networks-Supervised Learning Models
DrBaljitSinghKhehra
 
Ant colony optimization (aco)
Ant colony optimization (aco)Ant colony optimization (aco)
Ant colony optimization (aco)
gidla vinay
 
Divide and conquer
Divide and conquerDivide and conquer
Divide and conquer
Dr Shashikant Athawale
 
Feedforward neural network
Feedforward neural networkFeedforward neural network
Feedforward neural network
Sopheaktra YONG
 
Informed and Uninformed search Strategies
Informed and Uninformed search StrategiesInformed and Uninformed search Strategies
Informed and Uninformed search Strategies
Amey Kerkar
 
02 order of growth
02 order of growth02 order of growth
02 order of growth
Hira Gul
 
Transform coding
Transform codingTransform coding
Transform coding
Nancy K
 
Fundamentals of Data compression
Fundamentals of Data compressionFundamentals of Data compression
Fundamentals of Data compression
M.k. Praveen
 
Uninformed Search technique
Uninformed Search techniqueUninformed Search technique
Uninformed Search technique
Kapil Dahal
 
Analysis and Design of Algorithms
Analysis and Design of AlgorithmsAnalysis and Design of Algorithms
Analysis and Design of Algorithms
Bulbul Agrawal
 
gaussian filter seminar ppt
gaussian filter seminar pptgaussian filter seminar ppt
gaussian filter seminar ppt
sachin kumar rajput
 
What is Machine Learning | Introduction to Machine Learning | Machine Learnin...
What is Machine Learning | Introduction to Machine Learning | Machine Learnin...What is Machine Learning | Introduction to Machine Learning | Machine Learnin...
What is Machine Learning | Introduction to Machine Learning | Machine Learnin...
Simplilearn
 

What's hot (20)

Video compression
Video compressionVideo compression
Video compression
 
Forms of learning in ai
Forms of learning in aiForms of learning in ai
Forms of learning in ai
 
Counterpropagation NETWORK
Counterpropagation NETWORKCounterpropagation NETWORK
Counterpropagation NETWORK
 
Lecture 15 monkey banana problem
Lecture 15 monkey banana problemLecture 15 monkey banana problem
Lecture 15 monkey banana problem
 
Deep Learning Frameworks 2019 | Which Deep Learning Framework To Use | Deep L...
Deep Learning Frameworks 2019 | Which Deep Learning Framework To Use | Deep L...Deep Learning Frameworks 2019 | Which Deep Learning Framework To Use | Deep L...
Deep Learning Frameworks 2019 | Which Deep Learning Framework To Use | Deep L...
 
The Wumpus World in Artificial intelligence.pptx
The Wumpus World in Artificial intelligence.pptxThe Wumpus World in Artificial intelligence.pptx
The Wumpus World in Artificial intelligence.pptx
 
AI Lecture 3 (solving problems by searching)
AI Lecture 3 (solving problems by searching)AI Lecture 3 (solving problems by searching)
AI Lecture 3 (solving problems by searching)
 
Artificial Neural Networks-Supervised Learning Models
Artificial Neural Networks-Supervised Learning ModelsArtificial Neural Networks-Supervised Learning Models
Artificial Neural Networks-Supervised Learning Models
 
Ant colony optimization (aco)
Ant colony optimization (aco)Ant colony optimization (aco)
Ant colony optimization (aco)
 
Divide and conquer
Divide and conquerDivide and conquer
Divide and conquer
 
Feedforward neural network
Feedforward neural networkFeedforward neural network
Feedforward neural network
 
Informed and Uninformed search Strategies
Informed and Uninformed search StrategiesInformed and Uninformed search Strategies
Informed and Uninformed search Strategies
 
02 order of growth
02 order of growth02 order of growth
02 order of growth
 
Audio compression
Audio compressionAudio compression
Audio compression
 
Transform coding
Transform codingTransform coding
Transform coding
 
Fundamentals of Data compression
Fundamentals of Data compressionFundamentals of Data compression
Fundamentals of Data compression
 
Uninformed Search technique
Uninformed Search techniqueUninformed Search technique
Uninformed Search technique
 
Analysis and Design of Algorithms
Analysis and Design of AlgorithmsAnalysis and Design of Algorithms
Analysis and Design of Algorithms
 
gaussian filter seminar ppt
gaussian filter seminar pptgaussian filter seminar ppt
gaussian filter seminar ppt
 
What is Machine Learning | Introduction to Machine Learning | Machine Learnin...
What is Machine Learning | Introduction to Machine Learning | Machine Learnin...What is Machine Learning | Introduction to Machine Learning | Machine Learnin...
What is Machine Learning | Introduction to Machine Learning | Machine Learnin...
 

Similar to The Burrows-Wheeler Algorithm

Development of an Algorithm for 16-Bit WTM
Development of an Algorithm for 16-Bit WTMDevelopment of an Algorithm for 16-Bit WTM
Development of an Algorithm for 16-Bit WTM
IOSR Journals
 
L010137986
L010137986L010137986
L010137986
IOSR Journals
 
Write a function called float dotproduct (links to an external site.)(float a...
Write a function called float dotproduct (links to an external site.)(float a...Write a function called float dotproduct (links to an external site.)(float a...
Write a function called float dotproduct (links to an external site.)(float a...
JenniferBall48
 
COA pptx.pptx
COA pptx.pptxCOA pptx.pptx
COA pptx.pptx
AviPatel398803
 
Roba new
Roba newRoba new
Chapter 3: Simplification of Boolean Function
Chapter 3: Simplification of Boolean FunctionChapter 3: Simplification of Boolean Function
Chapter 3: Simplification of Boolean Function
Er. Nawaraj Bhandari
 
Python_Module_2.pdf
Python_Module_2.pdfPython_Module_2.pdf
Python_Module_2.pdf
R.K.College of engg & Tech
 
Python
PythonPython
Compiler Design - Ambiguous grammar, LMD & RMD, Infix & Postfix, Implementati...
Compiler Design - Ambiguous grammar, LMD & RMD, Infix & Postfix, Implementati...Compiler Design - Ambiguous grammar, LMD & RMD, Infix & Postfix, Implementati...
Compiler Design - Ambiguous grammar, LMD & RMD, Infix & Postfix, Implementati...
Saikrishna Tanguturu
 
Simplex algorithm
Simplex algorithmSimplex algorithm
Simplex algorithm
Khwaja Bilal Hassan
 
C UNIT-3 PREPARED BY M V B REDDY
C UNIT-3 PREPARED BY M V B REDDYC UNIT-3 PREPARED BY M V B REDDY
C UNIT-3 PREPARED BY M V B REDDYRajeshkumar Reddy
 
Python programming unit 2 -Slides-3.ppt
Python programming  unit 2 -Slides-3.pptPython programming  unit 2 -Slides-3.ppt
Python programming unit 2 -Slides-3.ppt
geethar79
 
Chapter 4: Combinational Logic
Chapter 4: Combinational LogicChapter 4: Combinational Logic
Chapter 4: Combinational Logic
Er. Nawaraj Bhandari
 
Simplex Algorithm
Simplex AlgorithmSimplex Algorithm
Simplex Algorithm
Aizaz Ahmad
 
13. Pointer and 2D array
13. Pointer  and  2D array13. Pointer  and  2D array
13. Pointer and 2D array
Gem WeBlog
 
Assignment8
Assignment8Assignment8
Assignment8
Sunita Milind Dol
 
Array 31.8.2020 updated
Array 31.8.2020 updatedArray 31.8.2020 updated
Array 31.8.2020 updated
vrgokila
 
Getting Started with C++
Getting Started with C++Getting Started with C++
Getting Started with C++
Praveen M Jigajinni
 
1 Revision Tour
1 Revision Tour1 Revision Tour
1 Revision Tour
Praveen M Jigajinni
 

Similar to The Burrows-Wheeler Algorithm (20)

Development of an Algorithm for 16-Bit WTM
Development of an Algorithm for 16-Bit WTMDevelopment of an Algorithm for 16-Bit WTM
Development of an Algorithm for 16-Bit WTM
 
L010137986
L010137986L010137986
L010137986
 
Write a function called float dotproduct (links to an external site.)(float a...
Write a function called float dotproduct (links to an external site.)(float a...Write a function called float dotproduct (links to an external site.)(float a...
Write a function called float dotproduct (links to an external site.)(float a...
 
COA pptx.pptx
COA pptx.pptxCOA pptx.pptx
COA pptx.pptx
 
Roba new
Roba newRoba new
Roba new
 
Chapter 3: Simplification of Boolean Function
Chapter 3: Simplification of Boolean FunctionChapter 3: Simplification of Boolean Function
Chapter 3: Simplification of Boolean Function
 
Python_Module_2.pdf
Python_Module_2.pdfPython_Module_2.pdf
Python_Module_2.pdf
 
Python
PythonPython
Python
 
Compiler Design - Ambiguous grammar, LMD & RMD, Infix & Postfix, Implementati...
Compiler Design - Ambiguous grammar, LMD & RMD, Infix & Postfix, Implementati...Compiler Design - Ambiguous grammar, LMD & RMD, Infix & Postfix, Implementati...
Compiler Design - Ambiguous grammar, LMD & RMD, Infix & Postfix, Implementati...
 
Simplex algorithm
Simplex algorithmSimplex algorithm
Simplex algorithm
 
C UNIT-3 PREPARED BY M V B REDDY
C UNIT-3 PREPARED BY M V B REDDYC UNIT-3 PREPARED BY M V B REDDY
C UNIT-3 PREPARED BY M V B REDDY
 
Python programming unit 2 -Slides-3.ppt
Python programming  unit 2 -Slides-3.pptPython programming  unit 2 -Slides-3.ppt
Python programming unit 2 -Slides-3.ppt
 
Chapter 4: Combinational Logic
Chapter 4: Combinational LogicChapter 4: Combinational Logic
Chapter 4: Combinational Logic
 
Simplex Algorithm
Simplex AlgorithmSimplex Algorithm
Simplex Algorithm
 
13. Pointer and 2D array
13. Pointer  and  2D array13. Pointer  and  2D array
13. Pointer and 2D array
 
Assignment8
Assignment8Assignment8
Assignment8
 
Array 31.8.2020 updated
Array 31.8.2020 updatedArray 31.8.2020 updated
Array 31.8.2020 updated
 
Cd2 [autosaved]
Cd2 [autosaved]Cd2 [autosaved]
Cd2 [autosaved]
 
Getting Started with C++
Getting Started with C++Getting Started with C++
Getting Started with C++
 
1 Revision Tour
1 Revision Tour1 Revision Tour
1 Revision Tour
 

More from Mustafa Salam

Switch-based Interconnection Networks 2
Switch-based Interconnection Networks 2Switch-based Interconnection Networks 2
Switch-based Interconnection Networks 2
Mustafa Salam
 
Interconnection Networks 1
Interconnection Networks 1Interconnection Networks 1
Interconnection Networks 1
Mustafa Salam
 
Parallel Processing
Parallel ProcessingParallel Processing
Parallel Processing
Mustafa Salam
 
Arabic Handwritten Text Recognition and Writer Identification
Arabic Handwritten Text Recognition and Writer IdentificationArabic Handwritten Text Recognition and Writer Identification
Arabic Handwritten Text Recognition and Writer Identification
Mustafa Salam
 
Web Services-Enhanced Agile Modeling and Integrating Business Processes
Web Services-Enhanced Agile Modeling and Integrating Business ProcessesWeb Services-Enhanced Agile Modeling and Integrating Business Processes
Web Services-Enhanced Agile Modeling and Integrating Business Processes
Mustafa Salam
 
Link analysis .. Data Mining
Link analysis .. Data MiningLink analysis .. Data Mining
Link analysis .. Data Mining
Mustafa Salam
 
Template Matching - Pattern Recognition
Template Matching - Pattern RecognitionTemplate Matching - Pattern Recognition
Template Matching - Pattern Recognition
Mustafa Salam
 
IP Addressing & subnetting strategy
IP Addressing & subnetting strategyIP Addressing & subnetting strategy
IP Addressing & subnetting strategy
Mustafa Salam
 
Cuckoo Search & Firefly Algorithms
Cuckoo Search & Firefly AlgorithmsCuckoo Search & Firefly Algorithms
Cuckoo Search & Firefly Algorithms
Mustafa Salam
 
Cloud technology (Mashup) + Case Study
Cloud technology (Mashup) + Case StudyCloud technology (Mashup) + Case Study
Cloud technology (Mashup) + Case Study
Mustafa Salam
 
Color Models
Color ModelsColor Models
Color Models
Mustafa Salam
 

More from Mustafa Salam (11)

Switch-based Interconnection Networks 2
Switch-based Interconnection Networks 2Switch-based Interconnection Networks 2
Switch-based Interconnection Networks 2
 
Interconnection Networks 1
Interconnection Networks 1Interconnection Networks 1
Interconnection Networks 1
 
Parallel Processing
Parallel ProcessingParallel Processing
Parallel Processing
 
Arabic Handwritten Text Recognition and Writer Identification
Arabic Handwritten Text Recognition and Writer IdentificationArabic Handwritten Text Recognition and Writer Identification
Arabic Handwritten Text Recognition and Writer Identification
 
Web Services-Enhanced Agile Modeling and Integrating Business Processes
Web Services-Enhanced Agile Modeling and Integrating Business ProcessesWeb Services-Enhanced Agile Modeling and Integrating Business Processes
Web Services-Enhanced Agile Modeling and Integrating Business Processes
 
Link analysis .. Data Mining
Link analysis .. Data MiningLink analysis .. Data Mining
Link analysis .. Data Mining
 
Template Matching - Pattern Recognition
Template Matching - Pattern RecognitionTemplate Matching - Pattern Recognition
Template Matching - Pattern Recognition
 
IP Addressing & subnetting strategy
IP Addressing & subnetting strategyIP Addressing & subnetting strategy
IP Addressing & subnetting strategy
 
Cuckoo Search & Firefly Algorithms
Cuckoo Search & Firefly AlgorithmsCuckoo Search & Firefly Algorithms
Cuckoo Search & Firefly Algorithms
 
Cloud technology (Mashup) + Case Study
Cloud technology (Mashup) + Case StudyCloud technology (Mashup) + Case Study
Cloud technology (Mashup) + Case Study
 
Color Models
Color ModelsColor Models
Color Models
 

Recently uploaded

Basic phrases for greeting and assisting costumers
Basic phrases for greeting and assisting costumersBasic phrases for greeting and assisting costumers
Basic phrases for greeting and assisting costumers
PedroFerreira53928
 
How to Create Map Views in the Odoo 17 ERP
How to Create Map Views in the Odoo 17 ERPHow to Create Map Views in the Odoo 17 ERP
How to Create Map Views in the Odoo 17 ERP
Celine George
 
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
siemaillard
 
Fish and Chips - have they had their chips
Fish and Chips - have they had their chipsFish and Chips - have they had their chips
Fish and Chips - have they had their chips
GeoBlogs
 
Instructions for Submissions thorugh G- Classroom.pptx
Instructions for Submissions thorugh G- Classroom.pptxInstructions for Submissions thorugh G- Classroom.pptx
Instructions for Submissions thorugh G- Classroom.pptx
Jheel Barad
 
TESDA TM1 REVIEWER FOR NATIONAL ASSESSMENT WRITTEN AND ORAL QUESTIONS WITH A...
TESDA TM1 REVIEWER  FOR NATIONAL ASSESSMENT WRITTEN AND ORAL QUESTIONS WITH A...TESDA TM1 REVIEWER  FOR NATIONAL ASSESSMENT WRITTEN AND ORAL QUESTIONS WITH A...
TESDA TM1 REVIEWER FOR NATIONAL ASSESSMENT WRITTEN AND ORAL QUESTIONS WITH A...
EugeneSaldivar
 
special B.ed 2nd year old paper_20240531.pdf
special B.ed 2nd year old paper_20240531.pdfspecial B.ed 2nd year old paper_20240531.pdf
special B.ed 2nd year old paper_20240531.pdf
Special education needs
 
Supporting (UKRI) OA monographs at Salford.pptx
Supporting (UKRI) OA monographs at Salford.pptxSupporting (UKRI) OA monographs at Salford.pptx
Supporting (UKRI) OA monographs at Salford.pptx
Jisc
 
ESC Beyond Borders _From EU to You_ InfoPack general.pdf
ESC Beyond Borders _From EU to You_ InfoPack general.pdfESC Beyond Borders _From EU to You_ InfoPack general.pdf
ESC Beyond Borders _From EU to You_ InfoPack general.pdf
Fundacja Rozwoju Społeczeństwa Przedsiębiorczego
 
Cambridge International AS A Level Biology Coursebook - EBook (MaryFosbery J...
Cambridge International AS  A Level Biology Coursebook - EBook (MaryFosbery J...Cambridge International AS  A Level Biology Coursebook - EBook (MaryFosbery J...
Cambridge International AS A Level Biology Coursebook - EBook (MaryFosbery J...
AzmatAli747758
 
Thesis Statement for students diagnonsed withADHD.ppt
Thesis Statement for students diagnonsed withADHD.pptThesis Statement for students diagnonsed withADHD.ppt
Thesis Statement for students diagnonsed withADHD.ppt
EverAndrsGuerraGuerr
 
Polish students' mobility in the Czech Republic
Polish students' mobility in the Czech RepublicPolish students' mobility in the Czech Republic
Polish students' mobility in the Czech Republic
Anna Sz.
 
The French Revolution Class 9 Study Material pdf free download
The French Revolution Class 9 Study Material pdf free downloadThe French Revolution Class 9 Study Material pdf free download
The French Revolution Class 9 Study Material pdf free download
Vivekanand Anglo Vedic Academy
 
The Challenger.pdf DNHS Official Publication
The Challenger.pdf DNHS Official PublicationThe Challenger.pdf DNHS Official Publication
The Challenger.pdf DNHS Official Publication
Delapenabediema
 
Additional Benefits for Employee Website.pdf
Additional Benefits for Employee Website.pdfAdditional Benefits for Employee Website.pdf
Additional Benefits for Employee Website.pdf
joachimlavalley1
 
The Roman Empire A Historical Colossus.pdf
The Roman Empire A Historical Colossus.pdfThe Roman Empire A Historical Colossus.pdf
The Roman Empire A Historical Colossus.pdf
kaushalkr1407
 
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXXPhrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
MIRIAMSALINAS13
 
Ethnobotany and Ethnopharmacology ......
Ethnobotany and Ethnopharmacology ......Ethnobotany and Ethnopharmacology ......
Ethnobotany and Ethnopharmacology ......
Ashokrao Mane college of Pharmacy Peth-Vadgaon
 
Sectors of the Indian Economy - Class 10 Study Notes pdf
Sectors of the Indian Economy - Class 10 Study Notes pdfSectors of the Indian Economy - Class 10 Study Notes pdf
Sectors of the Indian Economy - Class 10 Study Notes pdf
Vivekanand Anglo Vedic Academy
 
Unit 8 - Information and Communication Technology (Paper I).pdf
Unit 8 - Information and Communication Technology (Paper I).pdfUnit 8 - Information and Communication Technology (Paper I).pdf
Unit 8 - Information and Communication Technology (Paper I).pdf
Thiyagu K
 

Recently uploaded (20)

Basic phrases for greeting and assisting costumers
Basic phrases for greeting and assisting costumersBasic phrases for greeting and assisting costumers
Basic phrases for greeting and assisting costumers
 
How to Create Map Views in the Odoo 17 ERP
How to Create Map Views in the Odoo 17 ERPHow to Create Map Views in the Odoo 17 ERP
How to Create Map Views in the Odoo 17 ERP
 
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
 
Fish and Chips - have they had their chips
Fish and Chips - have they had their chipsFish and Chips - have they had their chips
Fish and Chips - have they had their chips
 
Instructions for Submissions thorugh G- Classroom.pptx
Instructions for Submissions thorugh G- Classroom.pptxInstructions for Submissions thorugh G- Classroom.pptx
Instructions for Submissions thorugh G- Classroom.pptx
 
TESDA TM1 REVIEWER FOR NATIONAL ASSESSMENT WRITTEN AND ORAL QUESTIONS WITH A...
TESDA TM1 REVIEWER  FOR NATIONAL ASSESSMENT WRITTEN AND ORAL QUESTIONS WITH A...TESDA TM1 REVIEWER  FOR NATIONAL ASSESSMENT WRITTEN AND ORAL QUESTIONS WITH A...
TESDA TM1 REVIEWER FOR NATIONAL ASSESSMENT WRITTEN AND ORAL QUESTIONS WITH A...
 
special B.ed 2nd year old paper_20240531.pdf
special B.ed 2nd year old paper_20240531.pdfspecial B.ed 2nd year old paper_20240531.pdf
special B.ed 2nd year old paper_20240531.pdf
 
Supporting (UKRI) OA monographs at Salford.pptx
Supporting (UKRI) OA monographs at Salford.pptxSupporting (UKRI) OA monographs at Salford.pptx
Supporting (UKRI) OA monographs at Salford.pptx
 
ESC Beyond Borders _From EU to You_ InfoPack general.pdf
ESC Beyond Borders _From EU to You_ InfoPack general.pdfESC Beyond Borders _From EU to You_ InfoPack general.pdf
ESC Beyond Borders _From EU to You_ InfoPack general.pdf
 
Cambridge International AS A Level Biology Coursebook - EBook (MaryFosbery J...
Cambridge International AS  A Level Biology Coursebook - EBook (MaryFosbery J...Cambridge International AS  A Level Biology Coursebook - EBook (MaryFosbery J...
Cambridge International AS A Level Biology Coursebook - EBook (MaryFosbery J...
 
Thesis Statement for students diagnonsed withADHD.ppt
Thesis Statement for students diagnonsed withADHD.pptThesis Statement for students diagnonsed withADHD.ppt
Thesis Statement for students diagnonsed withADHD.ppt
 
Polish students' mobility in the Czech Republic
Polish students' mobility in the Czech RepublicPolish students' mobility in the Czech Republic
Polish students' mobility in the Czech Republic
 
The French Revolution Class 9 Study Material pdf free download
The French Revolution Class 9 Study Material pdf free downloadThe French Revolution Class 9 Study Material pdf free download
The French Revolution Class 9 Study Material pdf free download
 
The Challenger.pdf DNHS Official Publication
The Challenger.pdf DNHS Official PublicationThe Challenger.pdf DNHS Official Publication
The Challenger.pdf DNHS Official Publication
 
Additional Benefits for Employee Website.pdf
Additional Benefits for Employee Website.pdfAdditional Benefits for Employee Website.pdf
Additional Benefits for Employee Website.pdf
 
The Roman Empire A Historical Colossus.pdf
The Roman Empire A Historical Colossus.pdfThe Roman Empire A Historical Colossus.pdf
The Roman Empire A Historical Colossus.pdf
 
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXXPhrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
Phrasal Verbs.XXXXXXXXXXXXXXXXXXXXXXXXXX
 
Ethnobotany and Ethnopharmacology ......
Ethnobotany and Ethnopharmacology ......Ethnobotany and Ethnopharmacology ......
Ethnobotany and Ethnopharmacology ......
 
Sectors of the Indian Economy - Class 10 Study Notes pdf
Sectors of the Indian Economy - Class 10 Study Notes pdfSectors of the Indian Economy - Class 10 Study Notes pdf
Sectors of the Indian Economy - Class 10 Study Notes pdf
 
Unit 8 - Information and Communication Technology (Paper I).pdf
Unit 8 - Information and Communication Technology (Paper I).pdfUnit 8 - Information and Communication Technology (Paper I).pdf
Unit 8 - Information and Communication Technology (Paper I).pdf
 

The Burrows-Wheeler Algorithm

  • 1.
  • 2. Data Compression Page | 2 The Burrows-Wheeler Algorithm 1. Introduction The Burrows-Wheeler Algorithm was published in the year 1994 by Michael Burrows and David Wheeler in the research report “A Block-sorting Lossless Data Compression Algorithm". The algorithm consists of several stages and thesestagesareperformedsuccessively.Theinput andoutput of each stages are blocks of arbitrary size, butthesizemustbe specified at the beginning of the whole compression process. With the decompression of the algorithm the data which compressedbythealgorithmcan be returned to their original data. Meanwhile, there are countless different versions of the algorithm. 2. Structure of the Burrows-Wheeler Algorithm The original algorithm consists of three stages:  The firststageof the algorithmisthe Burrows-WheelerTransform.Theaim of the first stage is to sortthe characters of the input with the result that identical characters are close together, or better to sequences of identical characters. Figure 1: Structure ofthe Burrows-WheelerAlgorithm
  • 3. Data Compression Page | 3  The second stage of the algorithm is the Move-To-FrontTransform. In this stage, the characters of the input, which are still in a local context, get assigned a global index value. Thereby, the characters, which occurs more frequently in the input get a lower index value as the less frequently, characters. It must be mentioned at this point that the first two stages of the algorithm do not compress the data, but the stages transformed the data with the result that they can be compressed better in the following third stage.  The thirdstage of the algorithmis the Entropy Coding. Inthis stage, the real compression of the data takes place. Normally, the Huffman coding or the Zero Run-Length Coding is used as entropy coder. 2.1Burrows-Wheeler Transform The aim of the Burrows-Wheeler Transformis to sortthe characters of the input with the resultthat identical characters are close together. Now we look detailed at the technique of the Burrows-Wheeler Transform. Process steps: 1. Ordertheinputn (nis the lengthoftheinput)times amongthemselves,therebyrotate each row one character to the right compared to the previous row 2. Sort the rows lexicographical The outputof this stage is the L-column (we call L-column for the lastcolumnandF-column for thefirstcolumnofthesortedmatrix) andtheindexvalueofthesortedmatrixthatcontains the original input.
  • 4. Data Compression Page | 4 Now we explain the procedure step by step with as example input. Step 1: Index F-column L-column 0 P A N A M A 1 A P A N A M 2 M A P A N A 3 A M A P A N 4 N A M A P A 5 A N A M A P Step 2: Index F-column L-column 0 A M A P A N 1 A N A M A P 2 A P A N A M 3 M A P A N A 4 N A M A P A 5 P A N A M A Output: In the output, the identical charactersare close together as in the input. The output of this stage is the input for the next stage, the Move-To-Front Transform. PANAMA NPM AAA 5
  • 5. Data Compression Page | 5 2.2Move-To-Front Transform As mentioned previously, in this stage the characters of the input get assigned a global index value. Therefore, we have in addition to the input a global list Y . Normally, the global list Y containsall charactersof the ASCII- Code in ascending order. Now we explain the procedurestep by step with (output of the example from the Burrows-Wheeler Transform) as example input. We use Y = [A, M, N, P] as global list and do not a global list of all characters of the ASCII-Code, because the example is better to present and easier to understand with the smaller global list. Process steps: 1. Save the index value of the global list Y which contains the firstcharacter of the input 2. Move the saved character of the previous step in the globalliston index position 0 and move allcharacters one positionto the rightwhich arelocatedin the global list before the old position of the saved character 3. Repeatstep 1 and 2 sequentially for the other characters of the inputand use for all repetitions the modified global list from the previous repetition The output of this stage consists of all saved index positions and the index value of the sorted matrix from the Burrows-Wheeler Transform which contains the original input. This index value will not processed in the Move-To-Front Transform. NPM AAA 5
  • 6. Data Compression Page | 6 Step 1: Input: NPMAAA Y = [A, M,N , P] ⇒ Save index position 2 Step 2: Y = [A, M, N , P ] ⇒ Y = [N , A, M, P ] Step 3: Y = [N, A, M,P] ⇒ Save index position 3 ⇒ Y = [P , N, A, M ] Y = [P, N, A, M ] ⇒ Save index position 3 ⇒ Y = [M , P, N, A] Y = [M, P, N, A] ⇒ Save index position 3 ⇒ Y = [A, M,P, N ] Y = [A, M,P, N ] ⇒ Save index position 0 ⇒ Y = [A, M, P, N ] Y = [A, M, P, N] ⇒ Save index position 0 ⇒ Y = [A, M, P, N] The output of this stage is the input for the next stage, the Entropy Coding (Zero Run-Length Coding). We see in this example that characters which occurs more frequently in the input get a lower index as the less frequently characters. However, the question is, which profit gives us the sequences of zeros and which profitgives us the Move-To-FrontTransform? Below we present with the Zero Run-Length Coding a simple compression method.
  • 7. Data Compression Page | 7 2.3Zero Run-Length Coding The Zero Run-Length Coding coded sequences of zeros to shorter strings. Now we explain the technique of the Zero Run-Length Coding step by step: 233300 (output of the example from the Move-To-Front Transform) as example input. We seein our example that the length of the output is one character smaller as the length of the input. For a larger input we can more profit from the Zero Run-Length Coding, because for example, we can coded 6 zeros with only 2 characters. At this point we see the profit of the Move-To-Front Transform. Example: 1. Increase allcharacters of the inputwhich are greater as 0 by 1 Input:233300 ⇒344400 2. Coding the sequences of zeros with string combinations of 0 and 1 We use atthis pointan example-coding table. Number of zeros Coding string 1 0 2 1 3 00 4 01 5 10 6 11 344400 ⇒ Output: 34441
  • 8. Data Compression Page | 8 3. Decompression and Move-To-Front Backtransform During the decompression of thedata the stages of the algorithmwill be run in the reverse order compared to the compression. Firstwe start with Zero Run-Length decoding. Example: 1. Decoding the sequences of codingstring with the number of zeros. We use atthis pointan example-coding table. Coding string Number of zeros 0 0 1 00 00 000 01 0000 10 00000 11 000000 2. Decrease allcharacters of the input, which are greater as 0 by 1 Input: 34441 ⇒Output:233300 Figure 2: Decompressionof the Burrows-WheelerAlgorithm
  • 9. Data Compression Page | 9 The technique of the Move-To-FrontBacktransformis analog to the Move- To-FrontTransformofthe compressionwith thedifferentthatwehaveindex values instead of characters as input. In addition to the input we use the same global list Y as also the Move-To-FrontTransformof the compression. We use 233300 5 (output from the example of the Move-To-Front Transform) as example input and the output for this example is NPMAAA 5 . The outputof this stageis the inputfor the Burrows-WheelerBacktransform. Process steps: 1. Save the character whichis located in the global listYon the firstindex value ofthe input 2. Move the saved character ofthe previous step in the globallist on index position 0 and move all characters one positionto the rightwhich are located in the globallist before the old position of the saved character 3. Repeatstep 1 and 2 sequentially for the other index values of the input and use for all repetitions the modified global list from the previous repetition The outputof this stage consists of all saved characters and the index value of the sorted matrix from the Burrows-Wheeler Transform, whichcontains the originalinput. This index value will not processed in the Move-To-Front Backtransform.
  • 10. Data Compression Page | 10 Step 1: Input: 233300 Y = [A, M,N , P] ⇒ Save index position 2 Step 2: Y = [A, M, N , P ] ⇒ Y = [N , A, M, P ] Step 3: Y = [N, A, M,P] ⇒ Save index position 3 ⇒ Y = [P , N, A, M ] Y = [P, N, A, M ] ⇒ Save index position 3 ⇒ Y = [M , P, N, A] Y = [M, P, N, A] ⇒ Save index position 3 ⇒ Y = [A, M,P, N ] Y = [A, M,P, N ] ⇒ Save index position 0 ⇒ Y = [A, M, P, N ] Y = [A, M, P, N] ⇒ Save index position 0 ⇒ Y = [A, M, P, N] Output is NPMAAA 5 .
  • 11. Data Compression Page | 11 3.1Burrows-Wheeler Backtransform The Burrows-WheelerBacktransformisthe mostcomplicated method of the Burrows-Wheeler Algorithm. If we remember back, we know that the input of the Burrows-Wheeler Backtransform is the L-column and the index value of the sorted matrix from the Burrows-Wheeler Transform, which contains the original input. Process steps: 1. Sort the L-column of the input alphabetical ⇒ F-column 2. Save the character which is located in the F-column on the input index 3. Search index value i, whereby, iis the index value of the character in the L-column which is identicalto the saved character ofthe previous step and this character has the same number ofidenticalcharacters with lower index valuesin the L-column as the saved character of the previous step in the F-column 4. Save the character which is located in the F-column on the index value i 5. Repeat step 3 and 4 and break off, when index value i is equal to the input index The output of this stage consists of all saved characters.
  • 12. Data Compression Page | 12 Now we explain the procedurestep by step with NPMAAA 5 (output of the example from the Move-To-Front Backtransform) as example input. Step 1: Step 2: Step 3:
  • 13. Data Compression Page | 13 Step 4: Step 5: Output: PANAMA (original input)
  • 14. Data Compression Page | 14 4. Conclusion We have presented with the Burrows-Wheeler Algorithm a Stagebase- Blocksorting algorithm that is used for the lossless data compression. We looked at the structure and the several stages of compression and the decompression,in whichthe stagesarerun in reverseordercompared to the compression. Burrows-Wheeler Algorithm is very good especially by the compression of text-based files. However, is worse for non-text-based files compared to other common data compression methods.
  • 15. Data Compression Page | 15 References [1] M. Burrows and D.J. Wheeler: .A Block-sorting Lossless Data Compression Algorithm., Digital Systems Research Center, Research Report 124, 1994. [2] J. Abel: .Grundlagen des Burrows-Wheeler-Kompressionsalgorithmus., Informatik - Forschung und Entwicklung, Springer Verlag, Vol. 18, Nr. 2, 2004.