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Prokaryotes
• Prokaryotes are unicellular organisms that lack organelles or other internal
membrane-bound structures
• They are found in both domains – Bacteria and Archaea
• Key points :-
• Prokaryotic cells lack a defined nucleus, but have a region in the cell, termed the
nucleoid, in which a single chromosomal, circular, double-stranded DNA molecule is
located.
• Archaeal membranes have replaced the fatty acids of bacterial membranes with
isoprene; some archaeal membranes are monolayer rather than bilayer.

• Key terms :-
• nucleoid: the irregularly-shaped region within a prokaryote cell
where the genetic material is localized
• plasmid: a circle of double-stranded DNA that is separate from
the chromosomes, which is found in bacteria and protozoa
• osmotic pressure: the hydrostatic pressure exerted by a solution
across a semipermeable membrane from a pure solvent
• The Plasma Membrane :-
• In archaeal cell membranes, isoprene (phytanyl) chains linked to
glycerol replace the fatty acids linked to glycerol in bacterial
membranes.
• Some archaeal membranes are lipid monolayers instead of
bilayers.


• Archaeal phospholipids differ from those found in Bacteria and
Eukarya in two ways.
• First, they have branched phytanyl(isoperene) sidechains
instead of linear ones.
• Second, an ether bond instead of an ester bond connects the
lipid to the glycerol.
• The compound ester possesses a carbon-carbonyl-oxygen bond,
while the ether compound has a carbon-oxygen-carbon bond.


• The P.M. also provide specific site at which the single DNA
remain attached. It is the point from where DNA replication
start.
P.M. Intrusion
• Infolding of the p.m. of all gram + and gram – bacteria give rise
two main types of structures :
• Mesosomes ( chondriods) :- an organelle of bacteria that
appears as an invagination of the plasma membrane and
functions either in DNA replication and cell division or excretion
of exoenzymes
• They are seen in Nitrosomonas(chemoautotrophic) and
Rhodopseudomonas (photosynthetic pigment) bacteria.

• Mesosome are also involved in cross-wall (septum)
formation during the division of cell.
• Chromatophores :-
• these are photosynthetic pigment-bearing membranous
structure of photosynthetic bacteria.
• they vary in form as vesicles, tubes, bundled tubes, stacks
or thylakoid ( as in cynobacteria)
• Rhodospirillum rubrum

• Cell wall :-
• The cytoplasm of prokaryotic cells has a high concentration of
dissolved solutes. Therefore, the osmotic pressure within the
cell is relatively high. The cell wall is a protective layer that
surrounds some cells and gives them shape and rigidity.
• The cell wall is absent in Mycoplasma
• Bacterial cell walls contain peptidoglycan composed of
polysaccharide chains that are cross-linked by unusual peptides
containing both L- and D-amino acids, including D-glutamic acid
and D-alanine.
• Proteins normally have only L-amino acids; as a consequence,
many of our antibiotics work by mimicking D-amino acids and,
therefore, have specific effects on bacterial cell wall
development.

• Peptidoglycan layer contain carbohydrates and proteins
• Bacteria are divided into two major groups: gram-positive and
gram-negative, based on their reaction to gram staining.
• Note that all gram-positive bacteria belong to one phylum
• bacteria in the other phyla (Proteobacteria, Chlamydias,
Spirochetes, Cyanobacteria, and others) are gram-negative.
• Gram-positive bacteria can be divided into two major
subdivisions:
• the phylum Actinobacteria, also described as the high-G+C
gram-positives.
• the phylum Firmicutes, also known as the low-G+C gram-
positives, a group that includes such well-known genera
as Bacillus and Clostridium.

• Gram-positive bacteria typically have a cell wall consisting of a
single thick layer of peptidoglycan.
• the most thoroughly studied gram-positive bacteria include
human pathogens (e.g., Mycobacterium tuberculosis, Bacillus
anthracis)
• Gram postive cell wall consist of : peptidoglycan and teichoic acid
• Peptidoglycan is complex of oligosaccharide and short peptide
• Oligosaccharide are N-acetylglucosamine & N-acetylmuramic acid
• Teichoic acid are coploymer of glycerol phosphate or ribitol
phosphate and carbohydrate linked via phosphodiester bond
• They are covalently linked to N-acetylmuramic acid or a terminal
D-alanine in the tetrapeptide
• The main function of teichoic acids is to provide rigidity to the cell-
wall by attracting cations such as magnesium and sodium.


• Teichoic acids may be covalently linked to lipids in the plasma
membrane to form lipoteichoic acids.
• Lipoteichoic acids anchor the cell wall to the cell membrane.

• Gram negative :- Escherichia coli
• Cell wall consist of three layers Peptidoglycan, Periplasmic space,
Outer membrane
• Peptidoglycan layer is thin lacks teichoic acid and lies next to
P.M.
• The periplasmic space lies outside the peptidoglycan layer and
contains proteins secreted by cell
• The outer layer consists of lipid bilayer and contains
lipopolysaccharide
• It is permeable and also contain proteins called porin which lines
channels large enough to let many chemicals pass

• Peptidoglycan are chemically similar in all prokaryotes and
differ only in the types of AA present in peptide portion of
molecule

characteristics Gram positive Gram negative Blue green algae
Layers 1 3 3
peptidoglycan + (thick) + (thin) + (thin)
Teichoic acid + - -
lipopolysaccharide - + +
Gram stain + - +


• Capsule :- in some bacteria, the cell wall is surrounded by an
additional slime or gel layer called capsule.
• It is thick, gummy, mucilaginous and is secreted by the P.M.
• The capsule serves mainly as a protective layer against attack by
phagocytes and by viruses
• It also help regulating the concentration and uptake of essential
ions and water.
• Capsule (also known as K antigen) is a major virulence factor of
bacteria, e.g. all of the principal pathogens which cause
pneumonia and meningitis, including Streptococcus
pneumoniae, Haemophilus influenzae, Neisseria meningitidis,
Klebsiella pneumoniae, Escherichia coli, and group B
streptococci have polysaccharide capsules on their surface

Forms of Bacteria
• Cocci:- these bacteria are spherical or round in shape
• E.g. Diplococcus pneumonia(diplococci), streptococus
pyrogenes(bead like chain, cause sore throat)

• Bacilli :- rod like bacteria
• Bacillus cause certain disease of man like
• Tuberculosis – mycobacterium or bacillus tuberculosis
• Tetanus – clostridium tetani, Typhoid – salmonella typhous
• Diptheria – corynebacterium diptheriae,
• Leprosy – mycobacterium leprae
• Dysentery or food poisoning – closteridium botylinum
• Anthrax – bacillus anthracis

• Spirilla :- these are also called spirochetes
• these are spiral shaped and motile bacteria
• Spirilla cause human disease such as syphilis(treponema
pallidium)
• Vibrio :- these are comma-shaped or bent-rod like bacteria
• Cause cholera – vibrio cholerae
Flagella
• Flagella for cellular locomotion
• Consist of single type of protein - flagellin

• The flagellum is attached at its base, by a short flexible hook
that is rotated like a propeller of ship, By the flagellar rotatory
motor
• The flagellar motor comprises four distinct parts :-
• The Rotor(M ring), Stator, Bearing ( S ring ) and Rod
• The Rotor is a protein disc integrated into the P.M.
• Rotor is driven by energy stored in the trans-membrane proton
H+ gradient & rotate rapidly in the lipid bilayer against another
protein disc called Stator
• A rod links the rotor to a hook & flagellum, thereby causing
them to rotate
• The protein Bearing serves as a seal the outer membrane of the
cell wall as the rotating rod passes through it
• The stator & bearing remains stationary

• The shaft bears a pair of ring in Gram + and two pairs of ring in
Gram negative
• The bacterial flagellum usually does not have any bounding
membranes and it grows at the tip
• Eukaryotic flagellum grows at the base adjacent to the basal
body


• Fimbriae or pili :- are non-motile but adhesive structure
• they enable the bacteria to stick firmly to other cells, to a
surface
• Pili help in conjugation ( sex pili)
• E.g. Gonorrhea- causing coccus, Neiseria gonorrhoeae
Transfer of Genetic Material in Bacterial Cells
• It take place in three ways :-
1) Transformation:-Bacterial transformation is a process of
horizontal gene transfer by which some bacteria take up
foreign genetic material (naked DNA) from the environment.
* It was first reported in Streptococcus pneumoniae by Griffith
in 1928.
* DNA as the transforming principle was demonstrated by Avery
et al in 1944.


• Transduction :-a process of genetic recombination in bacteria
in which genes from a host cell (a bacteria) are incorporated into
the genome of a bacterial viruse (bacteriophage) and then carried
to another host cell when the bacteriophage initiates another
cycle of infection.

• Conjugation :- is the process by which one bacterium transfers genetic
material to another through direct contact.
• During conjugation, one bacterium serves as the donor of the genetic material,
and the other serves as the recipient.
• The donor bacterium carries a DNA sequence called the fertility factor, or F-
factor.
• The F-factor allows the donor to produce a thin, tubelike structure called a
pilus, which the donor uses to contact the recipient.
• The pilus then draws the two bacteria together, at which time the donor
bacterium transfers genetic material to the recipient bacterium.


Thanks
Sukhmeet Kang

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Prokaryotic cell

  • 1. Prokaryotes • Prokaryotes are unicellular organisms that lack organelles or other internal membrane-bound structures • They are found in both domains – Bacteria and Archaea • Key points :- • Prokaryotic cells lack a defined nucleus, but have a region in the cell, termed the nucleoid, in which a single chromosomal, circular, double-stranded DNA molecule is located. • Archaeal membranes have replaced the fatty acids of bacterial membranes with isoprene; some archaeal membranes are monolayer rather than bilayer.
  • 2.  • Key terms :- • nucleoid: the irregularly-shaped region within a prokaryote cell where the genetic material is localized • plasmid: a circle of double-stranded DNA that is separate from the chromosomes, which is found in bacteria and protozoa • osmotic pressure: the hydrostatic pressure exerted by a solution across a semipermeable membrane from a pure solvent • The Plasma Membrane :- • In archaeal cell membranes, isoprene (phytanyl) chains linked to glycerol replace the fatty acids linked to glycerol in bacterial membranes. • Some archaeal membranes are lipid monolayers instead of bilayers.
  • 3.
  • 4.  • Archaeal phospholipids differ from those found in Bacteria and Eukarya in two ways. • First, they have branched phytanyl(isoperene) sidechains instead of linear ones. • Second, an ether bond instead of an ester bond connects the lipid to the glycerol. • The compound ester possesses a carbon-carbonyl-oxygen bond, while the ether compound has a carbon-oxygen-carbon bond.
  • 5.
  • 6.  • The P.M. also provide specific site at which the single DNA remain attached. It is the point from where DNA replication start.
  • 7. P.M. Intrusion • Infolding of the p.m. of all gram + and gram – bacteria give rise two main types of structures : • Mesosomes ( chondriods) :- an organelle of bacteria that appears as an invagination of the plasma membrane and functions either in DNA replication and cell division or excretion of exoenzymes • They are seen in Nitrosomonas(chemoautotrophic) and Rhodopseudomonas (photosynthetic pigment) bacteria.
  • 8.  • Mesosome are also involved in cross-wall (septum) formation during the division of cell. • Chromatophores :- • these are photosynthetic pigment-bearing membranous structure of photosynthetic bacteria. • they vary in form as vesicles, tubes, bundled tubes, stacks or thylakoid ( as in cynobacteria) • Rhodospirillum rubrum
  • 9.  • Cell wall :- • The cytoplasm of prokaryotic cells has a high concentration of dissolved solutes. Therefore, the osmotic pressure within the cell is relatively high. The cell wall is a protective layer that surrounds some cells and gives them shape and rigidity. • The cell wall is absent in Mycoplasma • Bacterial cell walls contain peptidoglycan composed of polysaccharide chains that are cross-linked by unusual peptides containing both L- and D-amino acids, including D-glutamic acid and D-alanine. • Proteins normally have only L-amino acids; as a consequence, many of our antibiotics work by mimicking D-amino acids and, therefore, have specific effects on bacterial cell wall development.
  • 10.  • Peptidoglycan layer contain carbohydrates and proteins • Bacteria are divided into two major groups: gram-positive and gram-negative, based on their reaction to gram staining. • Note that all gram-positive bacteria belong to one phylum • bacteria in the other phyla (Proteobacteria, Chlamydias, Spirochetes, Cyanobacteria, and others) are gram-negative. • Gram-positive bacteria can be divided into two major subdivisions: • the phylum Actinobacteria, also described as the high-G+C gram-positives. • the phylum Firmicutes, also known as the low-G+C gram- positives, a group that includes such well-known genera as Bacillus and Clostridium.
  • 11.  • Gram-positive bacteria typically have a cell wall consisting of a single thick layer of peptidoglycan. • the most thoroughly studied gram-positive bacteria include human pathogens (e.g., Mycobacterium tuberculosis, Bacillus anthracis) • Gram postive cell wall consist of : peptidoglycan and teichoic acid • Peptidoglycan is complex of oligosaccharide and short peptide • Oligosaccharide are N-acetylglucosamine & N-acetylmuramic acid • Teichoic acid are coploymer of glycerol phosphate or ribitol phosphate and carbohydrate linked via phosphodiester bond • They are covalently linked to N-acetylmuramic acid or a terminal D-alanine in the tetrapeptide • The main function of teichoic acids is to provide rigidity to the cell- wall by attracting cations such as magnesium and sodium.
  • 12.
  • 13.  • Teichoic acids may be covalently linked to lipids in the plasma membrane to form lipoteichoic acids. • Lipoteichoic acids anchor the cell wall to the cell membrane.
  • 14.  • Gram negative :- Escherichia coli • Cell wall consist of three layers Peptidoglycan, Periplasmic space, Outer membrane • Peptidoglycan layer is thin lacks teichoic acid and lies next to P.M. • The periplasmic space lies outside the peptidoglycan layer and contains proteins secreted by cell • The outer layer consists of lipid bilayer and contains lipopolysaccharide • It is permeable and also contain proteins called porin which lines channels large enough to let many chemicals pass
  • 15.  • Peptidoglycan are chemically similar in all prokaryotes and differ only in the types of AA present in peptide portion of molecule
  • 16.  characteristics Gram positive Gram negative Blue green algae Layers 1 3 3 peptidoglycan + (thick) + (thin) + (thin) Teichoic acid + - - lipopolysaccharide - + + Gram stain + - +
  • 17.
  • 18.  • Capsule :- in some bacteria, the cell wall is surrounded by an additional slime or gel layer called capsule. • It is thick, gummy, mucilaginous and is secreted by the P.M. • The capsule serves mainly as a protective layer against attack by phagocytes and by viruses • It also help regulating the concentration and uptake of essential ions and water. • Capsule (also known as K antigen) is a major virulence factor of bacteria, e.g. all of the principal pathogens which cause pneumonia and meningitis, including Streptococcus pneumoniae, Haemophilus influenzae, Neisseria meningitidis, Klebsiella pneumoniae, Escherichia coli, and group B streptococci have polysaccharide capsules on their surface
  • 19.
  • 20. Forms of Bacteria • Cocci:- these bacteria are spherical or round in shape • E.g. Diplococcus pneumonia(diplococci), streptococus pyrogenes(bead like chain, cause sore throat)
  • 21.  • Bacilli :- rod like bacteria • Bacillus cause certain disease of man like • Tuberculosis – mycobacterium or bacillus tuberculosis • Tetanus – clostridium tetani, Typhoid – salmonella typhous • Diptheria – corynebacterium diptheriae, • Leprosy – mycobacterium leprae • Dysentery or food poisoning – closteridium botylinum • Anthrax – bacillus anthracis
  • 22.  • Spirilla :- these are also called spirochetes • these are spiral shaped and motile bacteria • Spirilla cause human disease such as syphilis(treponema pallidium) • Vibrio :- these are comma-shaped or bent-rod like bacteria • Cause cholera – vibrio cholerae
  • 23. Flagella • Flagella for cellular locomotion • Consist of single type of protein - flagellin
  • 24.  • The flagellum is attached at its base, by a short flexible hook that is rotated like a propeller of ship, By the flagellar rotatory motor • The flagellar motor comprises four distinct parts :- • The Rotor(M ring), Stator, Bearing ( S ring ) and Rod • The Rotor is a protein disc integrated into the P.M. • Rotor is driven by energy stored in the trans-membrane proton H+ gradient & rotate rapidly in the lipid bilayer against another protein disc called Stator • A rod links the rotor to a hook & flagellum, thereby causing them to rotate • The protein Bearing serves as a seal the outer membrane of the cell wall as the rotating rod passes through it • The stator & bearing remains stationary
  • 25.  • The shaft bears a pair of ring in Gram + and two pairs of ring in Gram negative • The bacterial flagellum usually does not have any bounding membranes and it grows at the tip • Eukaryotic flagellum grows at the base adjacent to the basal body
  • 26.
  • 27.  • Fimbriae or pili :- are non-motile but adhesive structure • they enable the bacteria to stick firmly to other cells, to a surface • Pili help in conjugation ( sex pili) • E.g. Gonorrhea- causing coccus, Neiseria gonorrhoeae
  • 28. Transfer of Genetic Material in Bacterial Cells • It take place in three ways :- 1) Transformation:-Bacterial transformation is a process of horizontal gene transfer by which some bacteria take up foreign genetic material (naked DNA) from the environment. * It was first reported in Streptococcus pneumoniae by Griffith in 1928. * DNA as the transforming principle was demonstrated by Avery et al in 1944.
  • 29.
  • 30.  • Transduction :-a process of genetic recombination in bacteria in which genes from a host cell (a bacteria) are incorporated into the genome of a bacterial viruse (bacteriophage) and then carried to another host cell when the bacteriophage initiates another cycle of infection.
  • 31.  • Conjugation :- is the process by which one bacterium transfers genetic material to another through direct contact. • During conjugation, one bacterium serves as the donor of the genetic material, and the other serves as the recipient. • The donor bacterium carries a DNA sequence called the fertility factor, or F- factor. • The F-factor allows the donor to produce a thin, tubelike structure called a pilus, which the donor uses to contact the recipient. • The pilus then draws the two bacteria together, at which time the donor bacterium transfers genetic material to the recipient bacterium.
  • 32.