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GENE EXPRESSION &
GENE REGULATION
DR. MUHAMMAD ATIF RAZA
M.PHIL PATHOLOGY, DVM, RVMP
TABLE OF CONTENTS
Gene and Gene Expression
Stages of Gene Expression
Components of a Structural Gene
Gene Control Regions
Transcription
Translation
Gene Regulation
GENE & GENE EPRESSION
Gene:
A gene is the basic physical and functional unit of heredity. Genes are made up
of DNA.
(Genetic Home Reference, NIH)
Gene Expression:
Gene expression is the process by which the genetic code of a gene is used to
direct protein synthesis and produce the structures of the cell.
Genes that code for amino acid sequences are known as 'structural genes'.
(Virtual Genetics Education Centre, VGEC)
STAGES OF GENE EXPRESSION
The process of gene expression involves two main stages.
These are:
1. Transcription (In Nucleus)
2. Translation (In Cytoplasm)
Transcription Translation
The production of messenger RNA
(mRNA) by the enzyme RNA
polymerase, and the processing of the
resulting mRNA molecule.
The use of mRNA to direct protein
synthesis, and the subsequent post-
translational processing of the protein
molecule.
COMPONENTS OF A STRUCTURAL GENE
Exons:
Exons code for amino acids and collectively determine the amino acid
sequence of the protein product.
It is these portions of the gene that are represented in final mature mRNA
molecule.
Introns:
Introns are portions of the gene that do not code for amino acids, and are
removed (spliced) from the mRNA molecule before translation.
GENE CONTROL REGIONS
Start Site:
A start site for transcription.
Promoter:
A region a few hundred nucleotides 'upstream' of the gene (toward the 5' end).
It is not transcribed into mRNA, but plays a role in controlling the transcription
of the gene.
Transcription factors bind to specific nucleotide sequences in the promoter
region and assist in the binding of RNA polymerases.
GENE CONTROL REGIONS
Enhancers:
Activators bind to regions called 'enhancers' that increase the rate of
transcription.
These sites may be thousands of nucleotides from the coding sequences or
within an intron.
Silencers:
Some transcription factors (called repressors) bind to regions called 'silencers'
that depress the rate of transcription.
DIFFERENT PARTS OF GENE
Virtual Genetics Education Centre-VGEC
TRANSCRIPTION
Transcription is the process of RNA synthesis, controlled by the interaction of
promoters and enhancers.
Several different types of RNA are produced in transcription.
Messenger RNA (mRNA), which specifies the sequence of amino acids in the
protein product.
Transfer RNA (tRNA), which transport the amino acids to ribosomes for use in
building polypeptide and also position each amino acid at correct place.
Ribosomal RNA (rRNA), which provides the site where polypeptides are
assembled..
STEPS OF TRANSCRIPTION
Transcription involves four steps:
1. Initiation
2. Elongation
3. Termination
4. Processing
ProcessingTerminationElongationInitiation
STEPS OF TRANSCRIPTION
1. Initiation:
The DNA molecule unwinds and separates to form a small open complex.
RNA polymerase binds to the promoter of the template strand.
2. Elongation:
RNA polymerase moves along the template strand, synthesizing an mRNA
molecule.
In eukaryotes there are three RNA polymerases: I, II and III. The process
includes a proofreading mechanism.
STEPS OF TRANSCRIPTION
3. Termination:
Termination in eukaryotes is more complicated, involving the addition of
additional adenine nucleotides at the 3' of the RNA transcript (a process
referred to as polyadenylation).
4. Processing:
After transcription the RNA molecule is processed in a number of ways: introns
are removed and the exons are spliced together to form a mature mRNA
molecule consisting of a single protein-coding sequence.
RNA synthesis involves the normal base pairing rules, but the base thymine is
replaced with the base uracil.
TRANSCRIPTION
TRANSCRIPTION
TRANSLATION
In translation the mature mRNA molecule is used as a template to assemble a
series of amino acids to produce a polypeptide with a specific amino acid
sequence.
The complex in the cytoplasm at which this occurs is called a ribosome.
Ribosomes are a mixture of ribosomal proteins and ribosomal RNA (rRNA).
Ribosomes consist of a large subunit and a small subunit.
STEPS OF TRANSLATION
Translation involves four steps:
1. Initiation
2. Elongation
3. Termination
4. Processing
Initiation Elongation Termination Processing
STEPS OF TRANSLATION
1. Initiation:
The small subunit of the ribosome binds at the 5' end of the mRNA molecule
and moves in a 3' direction until it meets a start codon (AUG).
It then forms a complex with the large unit of the ribosome complex and an
initiation tRNA molecule.
2. Elongation:
Subsequent codons on the mRNA molecule determine which tRNA molecule
linked to an amino acid binds to the mRNA.
STEPS OF TRANSLATION
An enzyme peptidyl transferase links the amino acids together using peptide
bonds.
The process continues, producing a chain of amino acids as the ribosome
moves along the mRNA molecule.
3. Termination:
Translation in terminated when the ribosomal complex reached one or more
stop codons (UAA, UAG, UGA).
The ribosomal complex in eukaryotes is larger and more complicated than in
prokaryotes.
STEPS OF TRANSLATION
In addition, the processes of transcription and translation are divided in
eukaryotes between the nucleus (transcription) and the cytoplasm (translation),
which provides more opportunities for the regulation of gene expression.
TRANSLATION
TRANSLATION
GENE REGULATION
Gene regulation is essential for viruses, prokaryotes and eukaryotes as it
increases the versatility and adaptability of an organism by allowing the cell to
express protein when needed.
Although as early as 1951, Barbara McClintock showed interaction between
two genetic loci, Activator (Ac) and Dissociator (Ds), in the color formation of
maize seeds.
The first discovery of a gene regulation system is widely considered to be the
identification in 1961 of the lac operon, discovered by François
Jacob and Jacques Monod, in which some enzymes involved
in lactose metabolism are expressed by E. coli only in the presence of lactose
and absence of glucose.
GENE REGULATION
In multicellular organisms, gene regulation drives cellular
differentiation and morphogenesis in the embryo.
It leads to the creation of different cell types that possess different gene
expression profiles from the same genome sequence.
Although this does not explain how gene regulation originated.
Evolutionary biologists include it as a partial explanation of
how evolution works at a molecular level, and it is central to the science
of evolutionary developmental biology.
GENE REGULATION
Gene regulation is a label for the cellular processes that control the rate and
manner of gene expression.
A complex set of interactions between genes, RNA molecules, proteins
(including transcription factors) and other components of the expression system
determine when and where specific genes are activated and the amount of
protein or RNA product produced.
Some genes are expressed continuously, as they produce proteins involved in
basic metabolic functions.
some genes are expressed as part of the process of cell differentiation.
some genes are expressed as a result of cell differentiation.
REGULATED STAGES OF GENE EXPRESSION
Any step of gene expression may be modulated, from the DNA-
RNA transcription step to post-translational modification of a protein.
The following is a list of stages where gene expression is regulated, the most
extensively utilized point is Transcription Initiation:
Chromatin domains
Transcription
Post-transcriptional modification
RNA transport
Translation and mRNA degradation
MECHANISMS OF GENE REGULATION
Mechanisms of gene regulation include:
Regulating the rate of transcription. This is the most economical method of
regulation.
Regulating the processing of RNA molecules, including alternative splicing to
produce more than one protein product from a single gene.
Regulating the stability of mRNA molecules.
Regulating the rate of translation.
Transcription factors are proteins that play a role in regulating the transcription
of genes by binding to specific regulatory nucleotide sequences.
REFERENCES
https://www2.le.ac.uk/projects/vgec/highereducation/topics/geneexpression-regulation
https://courses.lumenlearning.com/boundless-biology/chapter/eukaryotic-transcription/
https://en.wikipedia.org/wiki/Regulation_of_gene_expression
www.wikkipwedia.com
www.google.com
Thank You So
Much

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Gene expression

  • 1. GENE EXPRESSION & GENE REGULATION DR. MUHAMMAD ATIF RAZA M.PHIL PATHOLOGY, DVM, RVMP
  • 2. TABLE OF CONTENTS Gene and Gene Expression Stages of Gene Expression Components of a Structural Gene Gene Control Regions Transcription Translation Gene Regulation
  • 3. GENE & GENE EPRESSION Gene: A gene is the basic physical and functional unit of heredity. Genes are made up of DNA. (Genetic Home Reference, NIH) Gene Expression: Gene expression is the process by which the genetic code of a gene is used to direct protein synthesis and produce the structures of the cell. Genes that code for amino acid sequences are known as 'structural genes'. (Virtual Genetics Education Centre, VGEC)
  • 4. STAGES OF GENE EXPRESSION The process of gene expression involves two main stages. These are: 1. Transcription (In Nucleus) 2. Translation (In Cytoplasm) Transcription Translation The production of messenger RNA (mRNA) by the enzyme RNA polymerase, and the processing of the resulting mRNA molecule. The use of mRNA to direct protein synthesis, and the subsequent post- translational processing of the protein molecule.
  • 5. COMPONENTS OF A STRUCTURAL GENE Exons: Exons code for amino acids and collectively determine the amino acid sequence of the protein product. It is these portions of the gene that are represented in final mature mRNA molecule. Introns: Introns are portions of the gene that do not code for amino acids, and are removed (spliced) from the mRNA molecule before translation.
  • 6. GENE CONTROL REGIONS Start Site: A start site for transcription. Promoter: A region a few hundred nucleotides 'upstream' of the gene (toward the 5' end). It is not transcribed into mRNA, but plays a role in controlling the transcription of the gene. Transcription factors bind to specific nucleotide sequences in the promoter region and assist in the binding of RNA polymerases.
  • 7. GENE CONTROL REGIONS Enhancers: Activators bind to regions called 'enhancers' that increase the rate of transcription. These sites may be thousands of nucleotides from the coding sequences or within an intron. Silencers: Some transcription factors (called repressors) bind to regions called 'silencers' that depress the rate of transcription.
  • 8. DIFFERENT PARTS OF GENE Virtual Genetics Education Centre-VGEC
  • 9. TRANSCRIPTION Transcription is the process of RNA synthesis, controlled by the interaction of promoters and enhancers. Several different types of RNA are produced in transcription. Messenger RNA (mRNA), which specifies the sequence of amino acids in the protein product. Transfer RNA (tRNA), which transport the amino acids to ribosomes for use in building polypeptide and also position each amino acid at correct place. Ribosomal RNA (rRNA), which provides the site where polypeptides are assembled..
  • 10. STEPS OF TRANSCRIPTION Transcription involves four steps: 1. Initiation 2. Elongation 3. Termination 4. Processing ProcessingTerminationElongationInitiation
  • 11. STEPS OF TRANSCRIPTION 1. Initiation: The DNA molecule unwinds and separates to form a small open complex. RNA polymerase binds to the promoter of the template strand. 2. Elongation: RNA polymerase moves along the template strand, synthesizing an mRNA molecule. In eukaryotes there are three RNA polymerases: I, II and III. The process includes a proofreading mechanism.
  • 12. STEPS OF TRANSCRIPTION 3. Termination: Termination in eukaryotes is more complicated, involving the addition of additional adenine nucleotides at the 3' of the RNA transcript (a process referred to as polyadenylation). 4. Processing: After transcription the RNA molecule is processed in a number of ways: introns are removed and the exons are spliced together to form a mature mRNA molecule consisting of a single protein-coding sequence. RNA synthesis involves the normal base pairing rules, but the base thymine is replaced with the base uracil.
  • 15. TRANSLATION In translation the mature mRNA molecule is used as a template to assemble a series of amino acids to produce a polypeptide with a specific amino acid sequence. The complex in the cytoplasm at which this occurs is called a ribosome. Ribosomes are a mixture of ribosomal proteins and ribosomal RNA (rRNA). Ribosomes consist of a large subunit and a small subunit.
  • 16. STEPS OF TRANSLATION Translation involves four steps: 1. Initiation 2. Elongation 3. Termination 4. Processing Initiation Elongation Termination Processing
  • 17. STEPS OF TRANSLATION 1. Initiation: The small subunit of the ribosome binds at the 5' end of the mRNA molecule and moves in a 3' direction until it meets a start codon (AUG). It then forms a complex with the large unit of the ribosome complex and an initiation tRNA molecule. 2. Elongation: Subsequent codons on the mRNA molecule determine which tRNA molecule linked to an amino acid binds to the mRNA.
  • 18. STEPS OF TRANSLATION An enzyme peptidyl transferase links the amino acids together using peptide bonds. The process continues, producing a chain of amino acids as the ribosome moves along the mRNA molecule. 3. Termination: Translation in terminated when the ribosomal complex reached one or more stop codons (UAA, UAG, UGA). The ribosomal complex in eukaryotes is larger and more complicated than in prokaryotes.
  • 19. STEPS OF TRANSLATION In addition, the processes of transcription and translation are divided in eukaryotes between the nucleus (transcription) and the cytoplasm (translation), which provides more opportunities for the regulation of gene expression.
  • 22. GENE REGULATION Gene regulation is essential for viruses, prokaryotes and eukaryotes as it increases the versatility and adaptability of an organism by allowing the cell to express protein when needed. Although as early as 1951, Barbara McClintock showed interaction between two genetic loci, Activator (Ac) and Dissociator (Ds), in the color formation of maize seeds. The first discovery of a gene regulation system is widely considered to be the identification in 1961 of the lac operon, discovered by François Jacob and Jacques Monod, in which some enzymes involved in lactose metabolism are expressed by E. coli only in the presence of lactose and absence of glucose.
  • 23. GENE REGULATION In multicellular organisms, gene regulation drives cellular differentiation and morphogenesis in the embryo. It leads to the creation of different cell types that possess different gene expression profiles from the same genome sequence. Although this does not explain how gene regulation originated. Evolutionary biologists include it as a partial explanation of how evolution works at a molecular level, and it is central to the science of evolutionary developmental biology.
  • 24. GENE REGULATION Gene regulation is a label for the cellular processes that control the rate and manner of gene expression. A complex set of interactions between genes, RNA molecules, proteins (including transcription factors) and other components of the expression system determine when and where specific genes are activated and the amount of protein or RNA product produced. Some genes are expressed continuously, as they produce proteins involved in basic metabolic functions. some genes are expressed as part of the process of cell differentiation. some genes are expressed as a result of cell differentiation.
  • 25. REGULATED STAGES OF GENE EXPRESSION Any step of gene expression may be modulated, from the DNA- RNA transcription step to post-translational modification of a protein. The following is a list of stages where gene expression is regulated, the most extensively utilized point is Transcription Initiation: Chromatin domains Transcription Post-transcriptional modification RNA transport Translation and mRNA degradation
  • 26. MECHANISMS OF GENE REGULATION Mechanisms of gene regulation include: Regulating the rate of transcription. This is the most economical method of regulation. Regulating the processing of RNA molecules, including alternative splicing to produce more than one protein product from a single gene. Regulating the stability of mRNA molecules. Regulating the rate of translation. Transcription factors are proteins that play a role in regulating the transcription of genes by binding to specific regulatory nucleotide sequences.

Editor's Notes

  1. Genetic Code: The nucleotide sequence.
  2. RNA Polymerase I: Synthesize rRNA. RNA Polymerase II: Synthesize mRNA. RNA Polymerase III: Synthesize tRNA. In prokaryotes RNA polymerase is a holoenzyme consisting of a number of subunits, including a sigma factor (transcription factor) that recognises the promoter.
  3. Cap and Tail is added to mRNA. Cap is 7-Methyl GTP and Tail is Poly-A Tail. In prokaryotes there are two ways in which transcription is terminated. In Rho-dependent termination, a protein factor called "Rho" is responsible for disrupting the complex involving the template strand, RNA polymerase and RNA molecule. In Rho-independent termination, a loop forms at the end of the RNA molecule, causing it to detach itself.