In this slide different fungi are Mentioned and their role as bio-control agents is also elaborated which is reviewed from different research articles cited in reference portion.
In this slide different fungi are Mentioned and their role as bio-control agents is also elaborated which is reviewed from different research articles cited in reference portion.
Recent Advances in Biopesticides BY Ghulam Murtazamurtaza8513
Biopestides are being manufactured all across the world but due to limited resources the research in biopesticides is not upto the mark. however advancement has been made in recent decades to protect crops from the attack of different insect pest in order to meet the agricultural productivity.
Advancements in Non-Chemical Weed Management.pptxshivalika6
Weeds compete with crops for essential resources such as nutrients, water, and sunlight.
Uncontrolled weed growth can significantly reduce crop yields, leading to economic losses for farmers.
Weeds serve as hosts for pests and diseases, increasing the risk of crop damage and yield loss.
Effective weed management is essential for maintaining soil health and promoting optimal crop growth.
Sustainable weed control practices contribute to environmental conservation and long-term agricultural sustainability.
This Presentation includes various tactics of IDM like Cultural control, Physical control, Chemical control, Biological control of plant disease. Useful for UG, PG Botany and Agriculture students
Direct Action Against The Pathogen
Genetic Modification Of The Host To Resist
Modification Of The Environment To Make It Unfavorable For Diseases Development.
Recent Advances in Biopesticides BY Ghulam Murtazamurtaza8513
Biopestides are being manufactured all across the world but due to limited resources the research in biopesticides is not upto the mark. however advancement has been made in recent decades to protect crops from the attack of different insect pest in order to meet the agricultural productivity.
Advancements in Non-Chemical Weed Management.pptxshivalika6
Weeds compete with crops for essential resources such as nutrients, water, and sunlight.
Uncontrolled weed growth can significantly reduce crop yields, leading to economic losses for farmers.
Weeds serve as hosts for pests and diseases, increasing the risk of crop damage and yield loss.
Effective weed management is essential for maintaining soil health and promoting optimal crop growth.
Sustainable weed control practices contribute to environmental conservation and long-term agricultural sustainability.
This Presentation includes various tactics of IDM like Cultural control, Physical control, Chemical control, Biological control of plant disease. Useful for UG, PG Botany and Agriculture students
Direct Action Against The Pathogen
Genetic Modification Of The Host To Resist
Modification Of The Environment To Make It Unfavorable For Diseases Development.
Nutrition is the science that deals with the study of nutrients and their role in maintaining human health and well-being. It encompasses the various processes involved in the intake, absorption, and utilization of essential nutrients, such as carbohydrates, proteins, fats, vitamins, minerals, and water, by the human body.
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
This pdf is about the Schizophrenia.
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Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
FAIRSpectra - Towards a common data file format for SIMS imagesAlex Henderson
Presentation from the 101st IUVSTA Workshop on High performance SIMS instrumentation and machine learning / artificial intelligence methods for complex data.
This presentation describes the issues relating to storing and sharing data from Secondary Ion Mass Spectrometry experiments, and some potential solutions.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...Sérgio Sacani
We report on the discovery of Gliese 12 b, the nearest transiting temperate, Earth-sized planet found to date. Gliese 12 is a
bright (V = 12.6 mag, K = 7.8 mag) metal-poor M4V star only 12.162 ± 0.005 pc away from the Solar system with one of the
lowest stellar activity levels known for M-dwarfs. A planet candidate was detected by TESS based on only 3 transits in sectors
42, 43, and 57, with an ambiguity in the orbital period due to observational gaps. We performed follow-up transit observations
with CHEOPS and ground-based photometry with MINERVA-Australis, SPECULOOS, and Purple Mountain Observatory,
as well as further TESS observations in sector 70. We statistically validate Gliese 12 b as a planet with an orbital period of
12.76144 ± 0.00006 d and a radius of 1.0 ± 0.1 R⊕, resulting in an equilibrium temperature of ∼315 K. Gliese 12 b has excellent
future prospects for precise mass measurement, which may inform how planetary internal structure is affected by the stellar
compositional environment. Gliese 12 b also represents one of the best targets to study whether Earth-like planets orbiting cool
stars can retain their atmospheres, a crucial step to advance our understanding of habitability on Earth and across the galaxy.
word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...Subhajit Sahu
Below are the important points I note from the 2020 paper by Martin Grohe:
- 1-WL distinguishes almost all graphs, in a probabilistic sense
- Classical WL is two dimensional Weisfeiler-Leman
- DeepWL is an unlimited version of WL graph that runs in polynomial time.
- Knowledge graphs are essentially graphs with vertex/edge attributes
ABSTRACT:
Vector representations of graphs and relational structures, whether handcrafted feature vectors or learned representations, enable us to apply standard data analysis and machine learning techniques to the structures. A wide range of methods for generating such embeddings have been studied in the machine learning and knowledge representation literature. However, vector embeddings have received relatively little attention from a theoretical point of view.
Starting with a survey of embedding techniques that have been used in practice, in this paper we propose two theoretical approaches that we see as central for understanding the foundations of vector embeddings. We draw connections between the various approaches and suggest directions for future research.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
We present you a part of our Tampere University's team - FHAIVE!
Besides producing excellent science, they are in charge or coordinating this project as well Tampere University, Faculty of Medicine and Health Technology.
2. MYCOFUNGICIDES
• Mycofungicides are antifungal chemicals produced by fungi.
• These are the chemicals used to kill fungi. They have the ability to
decrease plant disease and increase productivity.
• They interfere with the growth and development of other harmful
fungi.
• Mycofungicides are used to control plant diseases in agriculture.
• Trichoderma viride most common biofungicides.
3. Trichoderma viride
• T. viride useful as a biological control
against plant pathogenic fungi.
• It is found naturally in soil .
• It has been shown to provide protection
against such pathogens as Rhizoctonia,
Pythium and Armillaria.
• It is effective as a seed dressing in the
control of seed and soil-borne diseases .
• T. viride is act as a parasite , produce
antibiotic, Competition in nutritional
absorption, Resistance to plant
producing chemicals.
4.
5. Ampelomyces quisqualis
• A. quisqualis is the mycoparasitic
anamorphic ascomycete that reduces
the growth and kills powdery mildews.
• The fungus A. quisqualis was the first
organism reported to be a
hyperparasite of powdery mildew and it
can be easily found associated with
powdery mildew colonies.
• A. quisqualis isolate M-10 has been
formulated as AQ10 Biofungicide.
• This mycofungicide contains conidia of
A. quisqualis and formulated as water-
dispersible granules for the control of
powdery mildew of carrot, cucumber
and mango.
6.
7. Chaetomium
• Chaetomium species are normally found in
soil and organic compost.
• Chaetomium species have been reported to be
potential antagonists of various plant
pathogens, especially soil-borne and
seedborne pathogens.
• It attacks by competition, mycoparasitism,
anti-biosis, or various combinations of these.
• These taxa have been formulated in the form
of powder and pellets as Ketomium®, a
broad spectrum mycofungicide.
• Ketomium-mycofungicide was most efficient
in suppressing raspberry spur blight
caused by Didymella applanata and could
also reduce potato disease caused by R.
solani.
8. Gliocladium
• Gliocladium species are common soil
saprobes and several species have been
reported to be parasites of many plant
pathogens.
• It destroys the fungal host by direct
hyphal contact and forms
pseudoappressoria.
• G. catenulatum has also been used as a
wettable powder named Primastop.
• This product can be applied to soils,
roots, and foliage to reduce the
incidence of damping-off disease caused
by Pythium ultimum and Rhizoctonia
solani in the greenhouse.
9. Coniothyrium minitans
• Coniothyrium minitans is an anamorphic
coelomycete which has been reported to
be a mycoparasite of Sclerotinia species.
• It has been applied successfully to control
disease in many crops including lettuce,
oilseed rape , peanut and alfalfa.
• The main biological control mechanism of
C.minitans is mycoparasitism.
• The products of C. minitans can be
applied to soil or can be sprayed on
foliage and they can survive in soil for
several years.
10. • Other fungi that can be used as mycofungicides are Aspergillus and
Penicillium species.
• Aspergillus species are effective against the white-rot
basidiomycetes.
• The fungal antagonists Aureobasidium pullulans, and Ulocladium
atrum have also been tested for the control of Botrytis aclada which
causes onion neck rot.
• Clonostachys rosea is also reported as a biological control agent.
11. Mechanisms of biological control
• Biological control may result from direct or indirect interactions
between the beneficial microorganisms and the pathogen.
• A direct interaction may involve physical contact and synthesis of
hydrolytic enzymes, toxic compounds or antibiotics as well as
competition.
• An indirect interaction may result from induced resistance in the host
plant, the use of organic soil amendments to improve the activity of
antagonists against the pathogens.
• There are four principle mechanisms of biological control anti-biosis,
competition, mycoparasitism or lysis and induced resistance.
12. 1. Antibiosis
• Antibiosis is defined as the inhibition or destruction of the
microorganism by substances such as specific or nonspecific metabolites
or by the production of anti-biotics that inhibit the growth of another
microorganism.
• Example : penicillin – pencillium notatum
2. Competition
• Competition occurs between microorganisms when space and nutrients are
a limiting factor.
• The rhizosphere is a major concern where competition for space and
nutrient occurs.
• Competition can be divided into saprobic competition for nutrients in the
soil and rhizosphere, and competition for infection sites on and in the root.
13. 3. Mycoparasitism
• Mycoparasitism involves the complex process that includes the
following steps:
(1) The chemotrophic growth of the antagonist to the host.
(2) Recognition of the host by mycoparasite.
(3) Attachment.
(4) Excretion of extracellular Enzymes.
(5) lysis and exploitation of the host.
14. 4. Induced resistance
• Induced resistance is a state of enhanced defensive capacity
developed by a plant when appropriately stimulated.
• Induced resistance occurs in most plants in response to infestation by
pathogens.
• Induced resistance of host plants can be localized and/or systematic,
depending on the type, source, and amount of stimuli.
• Induced resistance by biocontrol agents involves the same suite of
genes and gene products involved in plant response known as
systematic acquired resistance (SAR).