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SOIL MICROBIOLOGY -
BIOGEOCHEMICAL CYCLE OF
CARBON
Dr. S. Anu Kiruthika
Bengaluru North University
Bengaluru.
1
INTRODUCTION
 Water is the source of oxygen, and the aerobic atmosphere of Earth is produced by
continuous photosynthetic processes.
 When O 2 production initially occurred on Earth, there were no aerobic organisms and
molecular oxygen accumulated.
 A robust collection of biological systems evolved to consume O 2 through respiration, and
currently there is equilibrium between O 2 production and O 2 consumption.
 When compared to other elements, the oxygen cycle is relatively simple.
 Large numbers of microorganisms interface with the oxygen cycle through redox
reactions.
2
OXYGEN CYCLE
 Solid lines indicate reduction; dashed lines indicate
oxidation.
 Heterotrophic and chemolithotrophic
microorganisms associated with the use of oxygen as
the terminal electron acceptor.
 Cyanobacteria were associated with the
photosynthetic release of molecular oxygen from water.
3
 There is an interconnection between the oxygen and carbon cycles
because oxygen reserves are found in organic compounds and CO2.
 With carbon as a principal element in cell systems, it would follow that
distribution,fluxes, and reserves of carbon would be of global interest.
 Microorganisms have an important role in all aspects of the carbon
cycle.
 Primary producers are the organisms that fix carbon dioxide, and while
higher plants are important in terrestrial areas, algae and cyanobacteria
account for primary productivity in marine environments.
4
 Nonphotosynthetic fixation of carbon dioxide by chemolithotrophic or
heterotrophic bacteria accounts for relatively small amounts of carbon
transferred from the atmosphere to biomass.
 Large quantities of carbon are dissolved in ocean water as
bicarbonate ion (HCO3-), and comparable quantities of primary
productivity occur in marine and terrestrial systems.
 Different groups of microorganisms are used for the cycling of C
under aerobic and anaerobic conditions.
5
CARBON CYCLE
 Carbon is exchanged among the biosphere, geosphere, hydrosphere and atmosphere of the
earth.
 Carbon is actively cycled between inorganic CO2 and the variety of organic compounds that
compose living organisms and their dead organic matter.
 Among the step of carbon cycle decomposition of organic matter by microbes is very important.
 Decomposition of organic matter in soils is done by fungi along with other microbes, chiefly
bacteria.
 Decomposition help to release nutrient blocked up in the dead organic matter of plants and
animals.
6
 In soil, microbes oxidize organic carbon into Co2 and liberate bound materials.
 Several types of decomposers are present.
 Cellulose decomposers – cellulose decomposing fungi mainly include Ascomycetes and
Deuteromycetes eg. Apergillus, Penicilium, Trichoderma, Fusarium etc.
 They break down cellulose simple sugar.
 Lignin decomposers – decomposed by Bascideomycetes such as Aphyllophorales & Agaricales
decomposition done by the production of lignolytic enzymes.
 Besides fungi, bacteria are also involved in the decomposition.
 Pectin decomposers – pectin substance are breakdown by microbial pectinase.
 Pectinase are produced by various specious of Rhizopus, Aspergillus, Fusarium and Geotrichum etc.
7
Microbial metabolism of carbon under anaerobic and aerobic conditions
8
9
10
 Soil is a great reservoir for carbon with appreciable quantities of complex organic material
known as humus is stable with a very low turnover rate.
 Although carbon dioxide is released from plants and animals by respiration, great quantities
of carbon dioxide result from decomposition of organic matter by microorganisms.
 Methane is produced by anaerobic archaea, and the resulting methane hydrates produced
may account for a considerable percentage of total carbon on Earth.
 Oxidation of methane with production of carbon dioxide is attributed to aerobic bacteria.
 Carbon monoxide is produced by a few bacteria as a result of decomposition, and this gas
does not become toxic because aerobic bacteria readily oxidize carbon monoxide to carbon
dioxide.
11
12
13
14
THE END
15

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Carbon cycle

  • 1. SOIL MICROBIOLOGY - BIOGEOCHEMICAL CYCLE OF CARBON Dr. S. Anu Kiruthika Bengaluru North University Bengaluru. 1
  • 2. INTRODUCTION  Water is the source of oxygen, and the aerobic atmosphere of Earth is produced by continuous photosynthetic processes.  When O 2 production initially occurred on Earth, there were no aerobic organisms and molecular oxygen accumulated.  A robust collection of biological systems evolved to consume O 2 through respiration, and currently there is equilibrium between O 2 production and O 2 consumption.  When compared to other elements, the oxygen cycle is relatively simple.  Large numbers of microorganisms interface with the oxygen cycle through redox reactions. 2
  • 3. OXYGEN CYCLE  Solid lines indicate reduction; dashed lines indicate oxidation.  Heterotrophic and chemolithotrophic microorganisms associated with the use of oxygen as the terminal electron acceptor.  Cyanobacteria were associated with the photosynthetic release of molecular oxygen from water. 3
  • 4.  There is an interconnection between the oxygen and carbon cycles because oxygen reserves are found in organic compounds and CO2.  With carbon as a principal element in cell systems, it would follow that distribution,fluxes, and reserves of carbon would be of global interest.  Microorganisms have an important role in all aspects of the carbon cycle.  Primary producers are the organisms that fix carbon dioxide, and while higher plants are important in terrestrial areas, algae and cyanobacteria account for primary productivity in marine environments. 4
  • 5.  Nonphotosynthetic fixation of carbon dioxide by chemolithotrophic or heterotrophic bacteria accounts for relatively small amounts of carbon transferred from the atmosphere to biomass.  Large quantities of carbon are dissolved in ocean water as bicarbonate ion (HCO3-), and comparable quantities of primary productivity occur in marine and terrestrial systems.  Different groups of microorganisms are used for the cycling of C under aerobic and anaerobic conditions. 5
  • 6. CARBON CYCLE  Carbon is exchanged among the biosphere, geosphere, hydrosphere and atmosphere of the earth.  Carbon is actively cycled between inorganic CO2 and the variety of organic compounds that compose living organisms and their dead organic matter.  Among the step of carbon cycle decomposition of organic matter by microbes is very important.  Decomposition of organic matter in soils is done by fungi along with other microbes, chiefly bacteria.  Decomposition help to release nutrient blocked up in the dead organic matter of plants and animals. 6
  • 7.  In soil, microbes oxidize organic carbon into Co2 and liberate bound materials.  Several types of decomposers are present.  Cellulose decomposers – cellulose decomposing fungi mainly include Ascomycetes and Deuteromycetes eg. Apergillus, Penicilium, Trichoderma, Fusarium etc.  They break down cellulose simple sugar.  Lignin decomposers – decomposed by Bascideomycetes such as Aphyllophorales & Agaricales decomposition done by the production of lignolytic enzymes.  Besides fungi, bacteria are also involved in the decomposition.  Pectin decomposers – pectin substance are breakdown by microbial pectinase.  Pectinase are produced by various specious of Rhizopus, Aspergillus, Fusarium and Geotrichum etc. 7
  • 8. Microbial metabolism of carbon under anaerobic and aerobic conditions 8
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  • 11.  Soil is a great reservoir for carbon with appreciable quantities of complex organic material known as humus is stable with a very low turnover rate.  Although carbon dioxide is released from plants and animals by respiration, great quantities of carbon dioxide result from decomposition of organic matter by microorganisms.  Methane is produced by anaerobic archaea, and the resulting methane hydrates produced may account for a considerable percentage of total carbon on Earth.  Oxidation of methane with production of carbon dioxide is attributed to aerobic bacteria.  Carbon monoxide is produced by a few bacteria as a result of decomposition, and this gas does not become toxic because aerobic bacteria readily oxidize carbon monoxide to carbon dioxide. 11
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