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Biology Test-taking Reminders



Last-Minute Checklist:

 Exam Date: Thursday, June 18, 12:15am - 3:15 [earliest allowable release – 2:00].
 If you are not taking a bus, arrive by 11:15 – you’ll be more relaxed this way.
 Bring to exam: #2 pencils (2).
 “ “ “ STANDARD BLACK or BLUE pens (2) (no “neon” colors allowed).
 “ “ “ any text books [if not already turned in].
 “ “ “ your cerebrum .


Be Prepared:

 Get a good night sleep, relax the morning of the test.
 Eat breakfast (Note: Mountain Dew™ is not a “good” complete breakfast).
 Try to relax.


Grades:

 Won’t be available for DAYS (don’t bother guidance or me, wait for report cards).
 If you should fail, you will be contacted with options.




R. Bio. End-of–year Cram                                                       Garnsey   1
BioCram Sheet I: Concepts Causing Confusion




R. Bio. End-of–year Cram                                                 Garnsey   2
Trouble Tables

 Concept                  Definition                            Cause                Example
            Gradual replacement of the organisms         Disruption of the     Abiotic  moss 
 Succession
            that occupy an environment                   ecosystem (fire, Man) field  Forrest
            Gradual change in organism over                                    Early primates 
 Evolution                                               Natural selection
            time -varied form of common ancestor                               Modern Man



   Concept                          Definition                              Common Error
 Resistance to     A natural ability of an organism to NOT be       Insects/bacteria cannot become
 Antibiotics or       affected by a chemical due to genetic        immune to chemicals; they simply
  Pesticides                         variation                       inherited the genetic variation.
                      The bodily response to exposure to a            Through evolution, they may
   Immunity
                           pathogen (WBC’s involved)                   become a resistant species.
 Resistance to                                                     The only time “resistance” should
                     The build-up of immunity by the body’s
   Disease                                                           be used is when antibodies are
                           natural defenses (WBC’s)
                                                                                 involved



     Concept           Chemical            Cause                  Effect                Outcome
                                                            Increase in Earth’s      Flooding, wild
 Global Warming             CO2       ANY combustion      Temp. due to trapped       weather, biome
                                                               radiant heat             changes
                                                          Cl and F permanently
                                         Propellants,                                   Increased
 Ozone Depletion            CFC’s                           bond with O3, thus
                                          coolants                                      mutations
                                                          loss of radiation filter
                                                                                     Loss of Aquatic
                           S and N       Coal & auto          Decrease pH in
     Acid Rain                                                                       life in lakes, tree
                            oxides       combustion              rainfall
                                                                                        damage/ loss



                               Darwin’s theory. Directed by Nature. Change directed by variation,
                 Natural
                                     competition, adaptation, survival of the fittest, speciation
 Selection
                              Directed by Man. We choose traits by choosing which plants or animals
               Artificial
                                         mate. Examples: all farm animals, flowers, crops


                                            BioCram Sheet II




R. Bio. End-of–year Cram                                                             Garnsey               3
Constant input of energy (sunlight) and transfer of energy between trophic levels
Ecosystem
                  Biodiversity (variety of producers, consumers . . .)
Requirements
                  Recycling of materials (carbon, oxygen, nitrogen)


                                        Ecosystem Concepts
 Energy Flow        Energy flows UP levels Only 10% of energy that enters organism is available to
                          Of pyramid                    be passed on to next trophic level
                                             Bottom level: producers (plants), next level up: primary
                     Order of organisms is
 Trophic levels                                   consumers (herbivores), top level: secondary
                        always the same
                                                             consumers (carnivores)
                    Runoff                   Allows entrance & spread through aquatic system
   Effects of
   Chemicals        Nondiscriminant          Harm to unintended beneficial organisms
                    Biomagnification         Increased accumulation as go up the food chain


                                      Cantankerous Chemicals
  PCB’s       Manufacturing wastes; aid to water pollution, contamination causes health risks
   DDT        Pesticide; run-off into H2O supply; biomagnification B. eagle decline, persistent
  CFC’s       From aerosols, coolants –decrease ozone level
Heavy metals Mercury, lead; contamination biomagnifies in fish; causes nervous disorders
General terms Herbicides, pesticides, biocides, toxins



                                            Aquatic Ecosystems
    Concept                  Definition                    Cause                      Problem
                                                  Natural –succession; Man
                     Deposit of minerals that                                Decreases DO limiting
 Eutrophication                                         –accelerated by
                     encourage algal growth                                         aquatic life
                                                    phosphates and nitrates
                      Amount of O2 in water DO increases as turbulence increases, current velocity
  Dissolved O2
                     available to organism use increases, and temperature decreases
     Light             Autotrophs can only live to the depth that light that Photosynthesis requires
   Penetration                          light penetrates to                           Light


                             Invasive Species (Exotic, Introduced, non-native)
    Organism                                                   Problem
Purple Loosestrife         Invades cattail swamps; out-competes cattails causing habitat loss
Zebra Mussel               Invaded Great Lakes; uses native organism’s resources and clogs H2O intakes
Gypsy Moth                 Invades deciduous forests; defoliation damage
European Starling          Invades cavity nesting sites; out-competes native song bird species

                                             BioCram Sheet III


R. Bio. End-of–year Cram                                                            Garnsey              4
ORGANIZATION
     OF LIFE                                  ORGANISM
                                              SYSTEMS
                                              ORGANS
                                              TISSUE
                                              CELLS

                                          NUCLEUS
                                          (ORGANELLE)



                                        CHROMOSOMES

                                              GENES




   Concept                 Definition                       Synonyms                     Examples
                                                      Gene splicing,          Bacterially produced
   Genetic   To use technology to change
                                                      cloning, recombinant    hormones, clones, insecticide-
 Engineering the genes of an organism
                                                      DNA                     producing plants
  Genetic                                             Due to: crossing over (meiosis), mutations (DNA) &
                 Offspring vary from parents
  Diversity                                           genetic recombination (gametes in sexual repro)



                                           Cell Membranes
                                                 Double layer of lipids with larger protein molecules
Structure             Fluid Mosaic Model
                                                 inserted throughout
                      Determine the passage of Molecules must be small enough to pass through (i.e.
Function
                      molecules in and out       glucose –yes, starch –no)
                      Active                            Requires energy (ATP)
Types of                                All             Requires no energy
Transport             Passive           Diffusion       Movement from high to low concentration
                                        Osmosis            “       “    “ “ “        “       of WATER
                                               BioCram Sheet IV

                                Importance of the Shape of Molecules


R. Bio. End-of–year Cram                                                                Garnsey            5
Purpose: speed up (catalyze)          Lock and Key model –enzyme must fit a
Enzymes
                   reaction rate                         specific substrate to work
                   Varied effects –regulation            Receptors in membranes of “target tissue”
Hormones
                   Travel through bloodstream            must fit for hormone to function
Neuro-             Released from terminal branches in    Must fit receptors in cell membranes of
transmitters       Neurons, fills synapse (space)        dendrites in next neuron
                                                         Will fit specific antigen receptors to activate
Antibodies         Active in immune system (defense)
                                                         its destruction
                                                         Mimic or prevent action of natural chemicals
Drugs              Many types
                                                         by fitting receptors




                                              Cell Division
                              # of      # New       Parent cell    Daughter
 Process       Cell types                                                               Purpose
                            Divisions    cells     chromosome     cell Chrom.
                                                                                 Identical body cells
             Somatic                              2n (diploid)    2n (diploid)
Mitosis                         1         3                                      Micro-organisms
             Unicellular                          46 -humans      46 -humans
                                                                                 Cancer
                                                  2n (diploid)    n (haploid)    Gametes
 Meiosis       gametes          2         4       46 –humans      23 –humans     Each has ½ of parent
                                                                                 DNA




                                     Basic Biochemistry
Element        Smallest chemical unit               C, H, O, N, P, S, Fe, K, Na, Cl,
Compound       2 or more different atom bonded      C6H12O6, H2O, NH3, CO2
Organic Comp. Contain both C and H                  Carbs, lipids, proteins, nucleic acids
Inorganic Comp Not “ “ “ “ “                        H2O, NaCl, NH3




                                 Biochemical Buiding Blocks
              Monosaccharides              “-ose” ending (i.e. glucose, sucrose), sugars
Carbohydrates
              Polysccharides               Starch, cellulose, glycogen, chitin
Lipids        Glycerol & 3 fatty acids     Fats, oils, waxes
Proteins      Amino acids (contains N)     Proteins, enzymes, some hormones (insulin)
              Nucleotides (phosphate,
Nucleic Acids                              DNA, RNA –responsible for heredity
              sugar, and base)
                                           BioCram Sheet V


                                        Biochemical Reactions

R. Bio. End-of–year Cram                                                           Garnsey                 6
Reactants      Compounds present before the reaction starts
Products       New compounds produced by changing reactants (are now larger are smaller)
Enzymes        Speed up (catalyze) chemical reactions
                  Breaking compounds down into smaller compounds
Hydrolysis
                  (digestion of starch to sugars), (digestion of proteins to amino acids)
Dehydration       Combining smaller compounds to make larger ones
Synthesis         (protein synthesis- combining amino acids to make proteins –in ribosomes)
               Releasing
Aerobic                            Uses: glucose Makes energy (ATP) Done in all cells with
               energy
Respiration                        And oxygen       And CO2 and H2O          mitochondria
               For use
                                                    Makes energy (ATP) Used when muscle cells
Anaerobic      Releasing
                                                    And lactic acid          lack O2
Respiration    energy              Uses glucose
                                                    Makes energy (ATP) Yeast cells and
(Fermentation) For use
                                                    CO2 and eth. alcohol anaerobic bacteria



                                       Microscope Function
Review parts of microscope: oculars, objectives, diaphragm, stage, fine & coarse adjustments
Review how to make a wet mount
Review how to stain a specimen
Review how to measure an object under magnification
The image is upside down and backwards of actual object
The field of view decreases as the magnification increase (so always begin at low power)
Center object before increasing magnification
Increase diaphragm opening (letting in more light) after increasing magnification



                                             Graphs
                     Variable controlled by the experimenter at the beginning of the experiment
Independent variable
                     (will take readings from pH 1 – 4 or temps. From 5 – 10o) -x axis
                     Unknown info. at the beginning of the experiment. This is the data being
Dependent variable
                     collected. (checking height of plants, or CO2 production) –y axis
Two-thirds rule      Use the majority of your graphing space (2/3 for rule of thumb)
Circle points              Follow instructions on which symbols to use around your plotted points
Extrapolation              Keep lines between connected points and DO NOT continue beyond

Line trends                Increasing, decreasing, no change



                                            BioCram Sheet VI


                                            Scientific Method

R. Bio. End-of–year Cram                                                           Garnsey          7
Steps        PHEDAR –problem, hypothesis, experiment, data, analysis, repeat
Variable     Whatever is being changed (varied) by the experimenter
Control      The set-up that lacks the variable (being used as a basis of comparison)
Hypothesis A best prediction made before the experiment takes place
Must only have one variable in each experiment
Must have large amounts of data (repeatability)



                                            Lab Safety 
             Try not to                           Prevention                        Remedy
Catch sleeves on fire                 Roll sleeves up                      Fire blanket
Catch hair on fire                    Tie hair back                        Safety shower
Splash caustic chemicals in eyes      Wear goggles                         Eye wash
Consume toxins in lab                 Avoid eating or drinking in lab      Brain transplant




Test-taking reminders:

 As you read …underline key words and concepts, write in the definitions to complex vocabulary
  words.
 Label or analyze all diagrams, tables, and graphs before reading answer choices.
 Paraphrase each question in you own words.
 In multiple choice… when your choices are wordy, it helps to reread the question in between
  reading each choice.
 In free response …check the point values given for the question and try to break down the question
  into the appropriate number of phrases or sentences.
 Be as specific as possible. If you complete an answer and are still able to insert a “why” –write
  more.
 Check written responses for ambiguous words such as “it”, “things”, “stuff”. Convert them to the
  appropriate nouns.
 Write whole sentences. Reread them to be sure that they are clear and make sense.




R. Bio. End-of–year Cram                                                          Garnsey          8

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Biology - Biocram Regents Review

  • 1. Biology Test-taking Reminders Last-Minute Checklist:  Exam Date: Thursday, June 18, 12:15am - 3:15 [earliest allowable release – 2:00].  If you are not taking a bus, arrive by 11:15 – you’ll be more relaxed this way.  Bring to exam: #2 pencils (2).  “ “ “ STANDARD BLACK or BLUE pens (2) (no “neon” colors allowed).  “ “ “ any text books [if not already turned in].  “ “ “ your cerebrum . Be Prepared:  Get a good night sleep, relax the morning of the test.  Eat breakfast (Note: Mountain Dew™ is not a “good” complete breakfast).  Try to relax. Grades:  Won’t be available for DAYS (don’t bother guidance or me, wait for report cards).  If you should fail, you will be contacted with options. R. Bio. End-of–year Cram Garnsey 1
  • 2. BioCram Sheet I: Concepts Causing Confusion R. Bio. End-of–year Cram Garnsey 2
  • 3. Trouble Tables Concept Definition Cause Example Gradual replacement of the organisms Disruption of the Abiotic  moss  Succession that occupy an environment ecosystem (fire, Man) field  Forrest Gradual change in organism over Early primates  Evolution Natural selection time -varied form of common ancestor Modern Man Concept Definition Common Error Resistance to A natural ability of an organism to NOT be Insects/bacteria cannot become Antibiotics or affected by a chemical due to genetic immune to chemicals; they simply Pesticides variation inherited the genetic variation. The bodily response to exposure to a Through evolution, they may Immunity pathogen (WBC’s involved) become a resistant species. Resistance to The only time “resistance” should The build-up of immunity by the body’s Disease be used is when antibodies are natural defenses (WBC’s) involved Concept Chemical Cause Effect Outcome Increase in Earth’s Flooding, wild Global Warming CO2 ANY combustion Temp. due to trapped weather, biome radiant heat changes Cl and F permanently Propellants, Increased Ozone Depletion CFC’s bond with O3, thus coolants mutations loss of radiation filter Loss of Aquatic S and N Coal & auto Decrease pH in Acid Rain life in lakes, tree oxides combustion rainfall damage/ loss Darwin’s theory. Directed by Nature. Change directed by variation, Natural competition, adaptation, survival of the fittest, speciation Selection Directed by Man. We choose traits by choosing which plants or animals Artificial mate. Examples: all farm animals, flowers, crops BioCram Sheet II R. Bio. End-of–year Cram Garnsey 3
  • 4. Constant input of energy (sunlight) and transfer of energy between trophic levels Ecosystem Biodiversity (variety of producers, consumers . . .) Requirements Recycling of materials (carbon, oxygen, nitrogen) Ecosystem Concepts Energy Flow Energy flows UP levels Only 10% of energy that enters organism is available to Of pyramid be passed on to next trophic level Bottom level: producers (plants), next level up: primary Order of organisms is Trophic levels consumers (herbivores), top level: secondary always the same consumers (carnivores) Runoff Allows entrance & spread through aquatic system Effects of Chemicals Nondiscriminant Harm to unintended beneficial organisms Biomagnification Increased accumulation as go up the food chain Cantankerous Chemicals PCB’s Manufacturing wastes; aid to water pollution, contamination causes health risks DDT Pesticide; run-off into H2O supply; biomagnification B. eagle decline, persistent CFC’s From aerosols, coolants –decrease ozone level Heavy metals Mercury, lead; contamination biomagnifies in fish; causes nervous disorders General terms Herbicides, pesticides, biocides, toxins Aquatic Ecosystems Concept Definition Cause Problem Natural –succession; Man Deposit of minerals that Decreases DO limiting Eutrophication –accelerated by encourage algal growth aquatic life phosphates and nitrates Amount of O2 in water DO increases as turbulence increases, current velocity Dissolved O2 available to organism use increases, and temperature decreases Light Autotrophs can only live to the depth that light that Photosynthesis requires Penetration light penetrates to Light Invasive Species (Exotic, Introduced, non-native) Organism Problem Purple Loosestrife Invades cattail swamps; out-competes cattails causing habitat loss Zebra Mussel Invaded Great Lakes; uses native organism’s resources and clogs H2O intakes Gypsy Moth Invades deciduous forests; defoliation damage European Starling Invades cavity nesting sites; out-competes native song bird species BioCram Sheet III R. Bio. End-of–year Cram Garnsey 4
  • 5. ORGANIZATION OF LIFE ORGANISM SYSTEMS ORGANS TISSUE CELLS NUCLEUS (ORGANELLE) CHROMOSOMES GENES Concept Definition Synonyms Examples Gene splicing, Bacterially produced Genetic To use technology to change cloning, recombinant hormones, clones, insecticide- Engineering the genes of an organism DNA producing plants Genetic Due to: crossing over (meiosis), mutations (DNA) & Offspring vary from parents Diversity genetic recombination (gametes in sexual repro) Cell Membranes Double layer of lipids with larger protein molecules Structure Fluid Mosaic Model inserted throughout Determine the passage of Molecules must be small enough to pass through (i.e. Function molecules in and out glucose –yes, starch –no) Active Requires energy (ATP) Types of All Requires no energy Transport Passive Diffusion Movement from high to low concentration Osmosis “ “ “ “ “ “ of WATER BioCram Sheet IV Importance of the Shape of Molecules R. Bio. End-of–year Cram Garnsey 5
  • 6. Purpose: speed up (catalyze) Lock and Key model –enzyme must fit a Enzymes reaction rate specific substrate to work Varied effects –regulation Receptors in membranes of “target tissue” Hormones Travel through bloodstream must fit for hormone to function Neuro- Released from terminal branches in Must fit receptors in cell membranes of transmitters Neurons, fills synapse (space) dendrites in next neuron Will fit specific antigen receptors to activate Antibodies Active in immune system (defense) its destruction Mimic or prevent action of natural chemicals Drugs Many types by fitting receptors Cell Division # of # New Parent cell Daughter Process Cell types Purpose Divisions cells chromosome cell Chrom. Identical body cells Somatic 2n (diploid) 2n (diploid) Mitosis 1 3 Micro-organisms Unicellular 46 -humans 46 -humans Cancer 2n (diploid) n (haploid) Gametes Meiosis gametes 2 4 46 –humans 23 –humans Each has ½ of parent DNA Basic Biochemistry Element Smallest chemical unit C, H, O, N, P, S, Fe, K, Na, Cl, Compound 2 or more different atom bonded C6H12O6, H2O, NH3, CO2 Organic Comp. Contain both C and H Carbs, lipids, proteins, nucleic acids Inorganic Comp Not “ “ “ “ “ H2O, NaCl, NH3 Biochemical Buiding Blocks Monosaccharides “-ose” ending (i.e. glucose, sucrose), sugars Carbohydrates Polysccharides Starch, cellulose, glycogen, chitin Lipids Glycerol & 3 fatty acids Fats, oils, waxes Proteins Amino acids (contains N) Proteins, enzymes, some hormones (insulin) Nucleotides (phosphate, Nucleic Acids DNA, RNA –responsible for heredity sugar, and base) BioCram Sheet V Biochemical Reactions R. Bio. End-of–year Cram Garnsey 6
  • 7. Reactants Compounds present before the reaction starts Products New compounds produced by changing reactants (are now larger are smaller) Enzymes Speed up (catalyze) chemical reactions Breaking compounds down into smaller compounds Hydrolysis (digestion of starch to sugars), (digestion of proteins to amino acids) Dehydration Combining smaller compounds to make larger ones Synthesis (protein synthesis- combining amino acids to make proteins –in ribosomes) Releasing Aerobic Uses: glucose Makes energy (ATP) Done in all cells with energy Respiration And oxygen And CO2 and H2O mitochondria For use Makes energy (ATP) Used when muscle cells Anaerobic Releasing And lactic acid lack O2 Respiration energy Uses glucose Makes energy (ATP) Yeast cells and (Fermentation) For use CO2 and eth. alcohol anaerobic bacteria Microscope Function Review parts of microscope: oculars, objectives, diaphragm, stage, fine & coarse adjustments Review how to make a wet mount Review how to stain a specimen Review how to measure an object under magnification The image is upside down and backwards of actual object The field of view decreases as the magnification increase (so always begin at low power) Center object before increasing magnification Increase diaphragm opening (letting in more light) after increasing magnification Graphs Variable controlled by the experimenter at the beginning of the experiment Independent variable (will take readings from pH 1 – 4 or temps. From 5 – 10o) -x axis Unknown info. at the beginning of the experiment. This is the data being Dependent variable collected. (checking height of plants, or CO2 production) –y axis Two-thirds rule Use the majority of your graphing space (2/3 for rule of thumb) Circle points Follow instructions on which symbols to use around your plotted points Extrapolation Keep lines between connected points and DO NOT continue beyond Line trends Increasing, decreasing, no change BioCram Sheet VI Scientific Method R. Bio. End-of–year Cram Garnsey 7
  • 8. Steps PHEDAR –problem, hypothesis, experiment, data, analysis, repeat Variable Whatever is being changed (varied) by the experimenter Control The set-up that lacks the variable (being used as a basis of comparison) Hypothesis A best prediction made before the experiment takes place Must only have one variable in each experiment Must have large amounts of data (repeatability) Lab Safety  Try not to Prevention Remedy Catch sleeves on fire Roll sleeves up Fire blanket Catch hair on fire Tie hair back Safety shower Splash caustic chemicals in eyes Wear goggles Eye wash Consume toxins in lab Avoid eating or drinking in lab Brain transplant Test-taking reminders:  As you read …underline key words and concepts, write in the definitions to complex vocabulary words.  Label or analyze all diagrams, tables, and graphs before reading answer choices.  Paraphrase each question in you own words.  In multiple choice… when your choices are wordy, it helps to reread the question in between reading each choice.  In free response …check the point values given for the question and try to break down the question into the appropriate number of phrases or sentences.  Be as specific as possible. If you complete an answer and are still able to insert a “why” –write more.  Check written responses for ambiguous words such as “it”, “things”, “stuff”. Convert them to the appropriate nouns.  Write whole sentences. Reread them to be sure that they are clear and make sense. R. Bio. End-of–year Cram Garnsey 8