An Infrared spectrum represents a fingerprint of a sample with absorption peaks which correspond to the frequencies of vibrations between the bonds of the atoms making up the material-Because each different material is a unique combination of atoms, no two compounds produce the exact same spectrum, therefore IR can result in a unique identification of every different kind of material!
introduction and principle of Mass spectrometry with its components.
ionization , accelerators deflection and detection, types of MS, different types of ion sources , types of mass analyzers , advantages and disadvantages of different types of ion source and mass analyzers, different types of detectors for the ions dectections
An Infrared spectrum represents a fingerprint of a sample with absorption peaks which correspond to the frequencies of vibrations between the bonds of the atoms making up the material-Because each different material is a unique combination of atoms, no two compounds produce the exact same spectrum, therefore IR can result in a unique identification of every different kind of material!
introduction and principle of Mass spectrometry with its components.
ionization , accelerators deflection and detection, types of MS, different types of ion sources , types of mass analyzers , advantages and disadvantages of different types of ion source and mass analyzers, different types of detectors for the ions dectections
Atomic absorption spectroscopy, History, atomization techniques, and instrume...Muhammad Asif Shaheeen
History, principle, types, instrumentation, comparison with atomic emission spectroscopy, interference, advantages and disadvantages of different types of atomization techniques.
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
What is greenhouse gasses and how many gasses are there to affect the Earth.moosaasad1975
What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
2. Introduction
• Atomic absorption spectroscopy is
quantitative method of analysis of metals and
some non-metals
• The technique was introduced in 1955 by Sir
Alan Walsh in Australia
• Concentrations are found in g/mL
range (ppm and ppb)
3. Principle
• In gaseous state atoms absorb ultraviolet or
visible light and make transitions to higher
electronic energy levels.
• The wavelength of each transition is specific to
each element – qualitative analysis
• Beer-Lambert’s law can be applied to find
concentrations using a calibration graph
prepared from standards
• Absorbance is directly proportional to path
length and concentration
4. Selection criteria for Sample
preparation
The selection of a preparation method is
dependent upon:
• The analyte
•The analyte concentration level
•The sample matrix
•The required sample size
•The environmental considerations.
5. Sample Preparation
• Dilution – sample is diluted in distilled water, acids
or organic solvent
• Decomposition – isolation of required element from
the sample by heating with/without a reagent
– Wet/acid decomposition (300C)
– Dry ashing (400-500C )- destroying the combustible
portion of the sample. Oxidising agents may be used
– Microwave decomposition (100-200C ) – sample
decomposed at high pressures in a Teflon container
• Calibration curve must be prepared using different
concentrations of the sample
6. Working
• The atoms of the solid are converted to gaseous
state in the atomiser
• Radiation of specific wavelength is emitted by the
hollow cathode lamp onto the gaseous atoms in the
atomiser
• The monochromator focuses the specific
wavelengths onto the detector
• The detector finds the amount of light absorbed
• The concentration of atoms in the sample is directly
proportional to the absorbance
9. Hollow Cathode Lamp
• Cathode is in the form of a hollow cylinder made of
the metal which has to be analysed
• Anode is made of tungsten filament
• They are sealed in a tube filled with inert gas like
Neon or Argon
• A large voltage across anode and cathode causes
the inert gas to ionize and form a plasma
• These ions are accelerated towards the cathode
causing atoms to be sputtered off
10. Hollow Cathode Lamp
• The ions and metal atoms are excited due to
collisions
• They give off photons of a certain wavelength
when they reach ground state
11. Nebuliser
• The nebuliser forms a mist or aerosol of the
sample
• This is done by forcing the sample at high
velocities through a narrow tube
• The sample is mixed with a fuel and oxidant
• Commonly used fuel-oxidant mixtures are
acetylene-air and acetylene-nitrous oxide.
13. Atomiser
• In the atomiser the sample solutions is
vaporised and the molecules are atomised
• Atomiser can be of two types
– Flame atomiser – Laminar consumption or total
flow
– Electro-thermal atomiser or graphite furnace
14. Atomiser
• Flame atomiser
– The flame is usually in the form of a sheet to
increase path length and hence increase the
absorbance and sensitivity.
sample mist
Solid/gas
aerosol
Gaseous
molecules Atom
15. Atomiser
• Flame atomiser
– Laminar flow – a mixture of sample, fuel and
oxidant is continuously introduced to the burner
head
– Total consumption – sample and fuel-oxidant
mixture are delivered separately to the burner
head. This is a much safer method and can be
easily constructed.
17. Atomiser
• Electro-thermal atomiser
– Graphite rods heated by passing current
– Sample goes through three phases to get vaporised
– Drying - the solvent is evaporated
– Pyrolysis
– Sample temperature is then increased rapidly to
vaporise it
– Light is then passed through the sample
18. Interferences
• Chemical interference
– Presence of thermally stable compound that is not
totally decomposed by the energy of the flame
– High flame temperature provides energy for
breakdown on interference
– Addition of releasing agent which reacts with the
interference
19. Interferences
• Ionization interferences
– Atoms of the samples are
ionized causing reduction in
number of electrons and
absorbance
– Addition of excess element,
like alkali elements, which
gets ionized easily
– Flame temperature may be
reduced
20. Interferences
• Matrix interference
– Due to viscosity, burning characteristics, surface tension of
solvent
– Due to usage of different solvents in calibration and sample
– Addition of diluents to reduce viscosity
• Background absorption
– Light scattering by particles in flame or absorption by
undissociated molecules
– This must be measured and subtracted from final results
– Absorption of elements occurs as a narrow line whereas
interference occurs over a broad range
21. Applications
• Level of metals could be detected in tissue samples
like Aluminum in blood and Copper in brain tissues
• Presence of metals as an impurity or in alloys could
be found easily
• Determination of elements in the agricultural and
food products
• Determination of lead in petrol
• Determination of calcium and magnesium in
cement
22.
23. Advantages and Disadvantages
• Advantages
– High sensitivity
– Easy to use
– Inexpensive
• Disadvantages
– Different cathode lamp for different elements
– Can detect only metals and some non metals
– Only one element detected
24. References
• Analytical Methods for Atomic Absorption
Spectroscopy – Perkin-Elmer
• Sample Preparation For Flame Atomic Absorption
Spectroscopy: An Overview - Nabil Ramadan Bader
• Atomic absorption spectrometry – Royal Society of
Chemistry
• NMSU web notes
Editor's Notes
Oxidising to speed up, prevent volatilising of analyte
Disadvantages – sample is lost, hence sample size is big
Advantages – sample size is small, no preparation is required Disadvantages – may not be completely atomised, lesser precision
Speak about monochromator and detector, chopper and ac currents
Reducing flame temperature may cause chemical interference