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Chapter 5
© 2010, Prentice Hall
Organic Chemistry, 7th Edition
L. G. Wade, Jr.
Stereochemistry
Chapter 5 2
Chirality
• ―Handedness‖: Right glove doesn’t fit
the left hand.
• Mirror-image object is different from the
original object.
Chapter 5 3
Achiral
• Objects that can be superposed are
achiral.
Chapter 5 4
Stereoisomers
Enantiomers: Nonsuperimposable mirror
images, different molecules with different
properties.
Chapter 5 5
Chiral Carbons
• Carbons with four different groups attached
are chiral.
• It’s mirror image will be a different
compound (enantiomer).
Chapter 5 6
Achiral Compounds
Take this mirror image and try to superimpose it
on the one to the left matching all the atoms.
Everything will match.
When the images can be superposed the
compound is achiral.
Chapter 5 7
Planes of Symmetry
• A molecule that has a plane of symmetry is
achiral.
Chapter 5 8
Cis and Trans Cyclic Compounds
• Cis-1,2-dichlorocyclohexane is achiral because the molecule
has an internal plane of symmetry. Both structures above can be
superimposed.
• Trans-1,2-dichlorocyclohexane does not have a plane of
symmetry so the images are nonsuperimposable and the
molecule will have two enantiomers.
Chapter 5 9
(R) and (S) Nomenclature
• Different molecules (enantiomers) must have different
names.
• Usually only one enantiomer will be biologically active.
• Configuration around the chiral carbon is specified
with (R) and (S).
Chapter 5 10
Cahn–Ingold–Prelog
Rules
• Assign a priority number to each group
attached to the chiral carbon.
• Priority is assigned according to atomic
number. The highest atomic number
assigned is the highest priority #1.
• In case of ties, look at the next atoms along
the chain.
• Double and triple bonds are treated like
bonds to duplicate atoms.
Chapter 5 11
Assign (R) or (S)
• Working in 3-D, rotate the molecule so that the lowest
priority group is in back.
• Draw an arrow from highest to lowest priority group.
• Clockwise = (R), Counterclockwise = (S)
Chapter 5 12
Assign Priorities
Atomic number: F > N > C > H
Once priorities have been assigned, the lowest priority
group (#4) should be moved to the back if necessary.
Chapter 5 13
Assign Priorities
Draw an arrow from Group 1 to Group 2 to Group 3 and
back to Group 1. Ignore Group 4.
Clockwise = (R) and Counterclockwise = (S)
Counterclockwise
(S)
Chapter 5 14
Example
C
OH
CH3CH2CH2
H
CH2CH3
1
2
3
4
C
CH2CH3
CH3CH2CH2
OH
H
1
2
3
4
rotate
When rotating to put the lowest priority group in the back,
keep one group in place and rotate the other three.
Clockwise
(R)
Treatment of Multiple Bonds
Chapter 5 15
Chapter 5 16
Example (Continued)
CH3
CH3CH2CH=CH
CH2CH2CH2CH3
H
1
2
3
4
Counterclockwise
(S)
Chapter 5 17
Draw the enantiomers of 1,3-dibromobutane and
label them as (R) and (S). (Making a model is
particularly helpful for this type of problem.)
The third carbon atom in 1,3-dibromobutane is
asymmetric. The bromine atom receives first
priority, the (–CH2CH2Br) group second priority,
the methyl group third, and the hydrogen fourth.
The following mirror images are drawn with the
hydrogen atom back, ready to assign (R) or (S) as
shown.
Solved Problem 1
Solution
Chapter 5 18
Properties of Enantiomers
• Same boiling point, melting point, and density.
• Same refractive index.
• Rotate the plane of polarized light in the same
magnitude, but in opposite directions.
• Different interaction with other chiral molecules:
– Active site of enzymes is selective for a specific
enantiomer.
– Taste buds and scent receptors are also chiral.
Enantiomers may have different smells.
Chapter 5 19
Optical Activity
• Enantiomers rotate the plane of polarized
light in opposite directions, but same
number of degrees.
Chapter 5 20
Polarimeter
Clockwise
Dextrorotatory (+)
Counterclockwise
Levorotatory (-)
Not related to (R) and (S)
Chapter 5 21
Specific Rotation
Observed rotation depends on the length
of the cell and concentration, as well as the
strength of optical activity, temperature,
and wavelength of light.
[ ] = (observed)
c l
Where (observed) is the rotation observed in
the polarimeter, c is concentration in g/mL and l is
length of sample cell in decimeters.
Chapter 5 22
When one of the enantiomers of 2-butanol is placed
in a polarimeter, the observed rotation is 4.05°
counterclockwise. The solution was made by
diluting 6 g of 2-butanol to a total of 40 mL, and
the solution was placed into a 200-mm polarimeter
tube for the measurement. Determine the specific
rotation for this enantiomer of 2-butanol.
Since it is levorotatory, this must be (–)-2-
butanol The concentration is 6 g per 40 mL = 0.15
g/ml, and the path length is 200 mm = 2 dm. The
specific rotation is
[ ]D
25=
–
4.05
°
(0.15
)(2)
= –13.5°
Solved Problem 2
Solution
Chapter 5 23
Biological Discrimination
Chapter 5 24
Racemic Mixtures
• Equal quantities of d- and l- enantiomers.
• Notation: (d,l) or ( )
• No optical activity.
• The mixture may have different boiling point (b. p.)
and melting point (m. p.) from the enantiomers!
Chapter 5 25
Racemic Products
If optically inactive reagents combine to
form a chiral molecule, a racemic mixture
is formed.
Chapter 5 26
Optical Purity
• Optical purity (o.p.) is sometimes called
enantiomeric excess (e.e.).
• One enantiomer is present in greater
amounts.
observed rotation
rotation of pure enantiomer
X 100o.p. =
Chapter 5 27
Calculate % Composition
The specific rotation of (S)-2-iodobutane is +15.90 .
Determine the % composition of a mixture of (R)-
and (S)-2-iodobutane if the specific rotation of the
mixture is -3.18 .
3.18
15.90
X 100o.p. = = 20%
2l = 120% l = 60% d = 40%
Sign is from the enantiomer in excess: levorotatory.
Chapter 5 28
Chirality of Conformers
• If equilibrium exists between two chiral
conformers, the molecule is not chiral.
• Judge chirality by looking at the most
symmetrical conformer.
• Cyclohexane can be considered to be
planar, on average.
Chapter 5 29
Chirality of Conformational
Isomers
The two chair conformations of cis-1,2-dibromocyclohexane
are nonsuperimposable, but the interconversion is fast and
the molecules are in equilibrium. Any sample would be
racemic and, as such, optically inactive.
Chapter 5 30
Nonmobile Conformers
• The planar conformation of the biphenyl derivative is too
sterically crowded. The compound has no rotation around
the central C—C bond and thus it is conformationally
locked.
• The staggered conformations are chiral: They are
nonsuperimposable mirror images.
Chapter 5 31
Allenes
• Some allenes are chiral even though
they do not have a chiral carbon.
• Central carbon is sp hybridized.
• To be chiral, the groups at the end
carbons must have different groups.
Chapter 5 32
2,3-Pentadiene Is Chiral
Chapter 5 33
Fischer Projections
• Flat representation of a 3-D molecule.
• A chiral carbon is at the intersection of
horizontal and vertical lines.
• Horizontal lines are forward, out-of-plane.
• Vertical lines are behind the plane.
Chapter 5 34
Fischer Projections (Continued)
Chapter 5 35
Fischer Rules
• Carbon chain is on the vertical line.
• Highest oxidized carbon is at top.
• Rotation of 180 in plane doesn’t
change molecule.
• Do not rotate 90 !
Chapter 5 36
180 Rotation
• A rotation of 180 is allowed because it will
not change the configuration.
Chapter 5 37
90 Rotation
• A 90 rotation will change the orientation of
the horizontal and vertical groups.
• Do not rotate a Fischer projection 90 .
Chapter 5 38
Fischer Mirror Images
• Fisher projections are easy to draw and make
it easier to find enantiomers and internal
mirror planes when the molecule has 2 or
more chiral centers.
CH3
H Cl
Cl H
CH3
Chapter 5 39
Fischer (R) and (S)
• Lowest priority (usually H) comes forward, so
assignment rules are backwards!
• Clockwise 1-2-3 is (S) and counterclockwise
1-2-3 is (R).
• Example:
(S)
(S)
CH3
H Cl
Cl H
CH3
Chapter 5 40
Diastereomers
• Molecules with two or more chiral carbons.
• Stereoisomers that are not mirror images.
Chapter 5 41
Alkenes
• Cis-trans isomers are not mirror images, so
these are diastereomers.
Chapter 5 42
Two or More Chiral Carbons
• When compounds have two or more chiral
centers they have enantiomers,
diastereomers, or meso isomers.
• Enantiomers have opposite configurations at
each corresponding chiral carbon.
• Diastereomers have some matching, some
opposite configurations.
• Meso compounds have internal mirror planes.
• Maximum number of isomers is 2n, where n =
the number of chiral carbons.
Chapter 5
43
Are the structures connected the same?Are the structures connected the same?
yesyes nono
Are they mirror images?Are they mirror images? Constitutional IsomersConstitutional Isomers
yesyes nono
EnantiomersEnantiomers
All chiral centers willAll chiral centers will
be opposite between them.be opposite between them.
Is there a plane of symmetry?Is there a plane of symmetry?
yesyes nono
DiastereomersDiastereomersMesoMeso
superimposablesuperimposable
Comparing Structures
Chapter 5 44
• Meso compounds have a plane of symmetry.
• If one image was rotated 180 , then it could be
superimposed on the other image.
• Meso compounds are achiral even though they have
chiral centers.
Meso Compounds
Chapter 5 45
Number of Stereoisomers
The 2n rule will not apply to compounds that may have a
plane of symmetry. 2,3-dibromobutane has only 3
stereoisomers: ( ) diastereomer and the meso diastereomer.
Chapter 5 46
Properties of Diastereomers
• Diastereomers have different physical
properties, so they can be easily separated.
• Enantiomers differ only in reaction with other
chiral molecules and the direction in which
polarized light is rotated.
• Enantiomers are difficult to separate.
• Convert enantiomers into diastereomers to be
able to separate them.
Chapter 5 47
Resolution of Enantiomers
React the racemic mixture with a pure chiral
compound, such as tartaric acid, to form
diastereomers, then separate them.
Chapter 5 48
Chromatographic
Resolution of Enantiomers

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05 - Stereochemistry - Wade 7th

  • 1. Chapter 5 © 2010, Prentice Hall Organic Chemistry, 7th Edition L. G. Wade, Jr. Stereochemistry
  • 2. Chapter 5 2 Chirality • ―Handedness‖: Right glove doesn’t fit the left hand. • Mirror-image object is different from the original object.
  • 3. Chapter 5 3 Achiral • Objects that can be superposed are achiral.
  • 4. Chapter 5 4 Stereoisomers Enantiomers: Nonsuperimposable mirror images, different molecules with different properties.
  • 5. Chapter 5 5 Chiral Carbons • Carbons with four different groups attached are chiral. • It’s mirror image will be a different compound (enantiomer).
  • 6. Chapter 5 6 Achiral Compounds Take this mirror image and try to superimpose it on the one to the left matching all the atoms. Everything will match. When the images can be superposed the compound is achiral.
  • 7. Chapter 5 7 Planes of Symmetry • A molecule that has a plane of symmetry is achiral.
  • 8. Chapter 5 8 Cis and Trans Cyclic Compounds • Cis-1,2-dichlorocyclohexane is achiral because the molecule has an internal plane of symmetry. Both structures above can be superimposed. • Trans-1,2-dichlorocyclohexane does not have a plane of symmetry so the images are nonsuperimposable and the molecule will have two enantiomers.
  • 9. Chapter 5 9 (R) and (S) Nomenclature • Different molecules (enantiomers) must have different names. • Usually only one enantiomer will be biologically active. • Configuration around the chiral carbon is specified with (R) and (S).
  • 10. Chapter 5 10 Cahn–Ingold–Prelog Rules • Assign a priority number to each group attached to the chiral carbon. • Priority is assigned according to atomic number. The highest atomic number assigned is the highest priority #1. • In case of ties, look at the next atoms along the chain. • Double and triple bonds are treated like bonds to duplicate atoms.
  • 11. Chapter 5 11 Assign (R) or (S) • Working in 3-D, rotate the molecule so that the lowest priority group is in back. • Draw an arrow from highest to lowest priority group. • Clockwise = (R), Counterclockwise = (S)
  • 12. Chapter 5 12 Assign Priorities Atomic number: F > N > C > H Once priorities have been assigned, the lowest priority group (#4) should be moved to the back if necessary.
  • 13. Chapter 5 13 Assign Priorities Draw an arrow from Group 1 to Group 2 to Group 3 and back to Group 1. Ignore Group 4. Clockwise = (R) and Counterclockwise = (S) Counterclockwise (S)
  • 14. Chapter 5 14 Example C OH CH3CH2CH2 H CH2CH3 1 2 3 4 C CH2CH3 CH3CH2CH2 OH H 1 2 3 4 rotate When rotating to put the lowest priority group in the back, keep one group in place and rotate the other three. Clockwise (R)
  • 15. Treatment of Multiple Bonds Chapter 5 15
  • 16. Chapter 5 16 Example (Continued) CH3 CH3CH2CH=CH CH2CH2CH2CH3 H 1 2 3 4 Counterclockwise (S)
  • 17. Chapter 5 17 Draw the enantiomers of 1,3-dibromobutane and label them as (R) and (S). (Making a model is particularly helpful for this type of problem.) The third carbon atom in 1,3-dibromobutane is asymmetric. The bromine atom receives first priority, the (–CH2CH2Br) group second priority, the methyl group third, and the hydrogen fourth. The following mirror images are drawn with the hydrogen atom back, ready to assign (R) or (S) as shown. Solved Problem 1 Solution
  • 18. Chapter 5 18 Properties of Enantiomers • Same boiling point, melting point, and density. • Same refractive index. • Rotate the plane of polarized light in the same magnitude, but in opposite directions. • Different interaction with other chiral molecules: – Active site of enzymes is selective for a specific enantiomer. – Taste buds and scent receptors are also chiral. Enantiomers may have different smells.
  • 19. Chapter 5 19 Optical Activity • Enantiomers rotate the plane of polarized light in opposite directions, but same number of degrees.
  • 20. Chapter 5 20 Polarimeter Clockwise Dextrorotatory (+) Counterclockwise Levorotatory (-) Not related to (R) and (S)
  • 21. Chapter 5 21 Specific Rotation Observed rotation depends on the length of the cell and concentration, as well as the strength of optical activity, temperature, and wavelength of light. [ ] = (observed) c l Where (observed) is the rotation observed in the polarimeter, c is concentration in g/mL and l is length of sample cell in decimeters.
  • 22. Chapter 5 22 When one of the enantiomers of 2-butanol is placed in a polarimeter, the observed rotation is 4.05° counterclockwise. The solution was made by diluting 6 g of 2-butanol to a total of 40 mL, and the solution was placed into a 200-mm polarimeter tube for the measurement. Determine the specific rotation for this enantiomer of 2-butanol. Since it is levorotatory, this must be (–)-2- butanol The concentration is 6 g per 40 mL = 0.15 g/ml, and the path length is 200 mm = 2 dm. The specific rotation is [ ]D 25= – 4.05 ° (0.15 )(2) = –13.5° Solved Problem 2 Solution
  • 23. Chapter 5 23 Biological Discrimination
  • 24. Chapter 5 24 Racemic Mixtures • Equal quantities of d- and l- enantiomers. • Notation: (d,l) or ( ) • No optical activity. • The mixture may have different boiling point (b. p.) and melting point (m. p.) from the enantiomers!
  • 25. Chapter 5 25 Racemic Products If optically inactive reagents combine to form a chiral molecule, a racemic mixture is formed.
  • 26. Chapter 5 26 Optical Purity • Optical purity (o.p.) is sometimes called enantiomeric excess (e.e.). • One enantiomer is present in greater amounts. observed rotation rotation of pure enantiomer X 100o.p. =
  • 27. Chapter 5 27 Calculate % Composition The specific rotation of (S)-2-iodobutane is +15.90 . Determine the % composition of a mixture of (R)- and (S)-2-iodobutane if the specific rotation of the mixture is -3.18 . 3.18 15.90 X 100o.p. = = 20% 2l = 120% l = 60% d = 40% Sign is from the enantiomer in excess: levorotatory.
  • 28. Chapter 5 28 Chirality of Conformers • If equilibrium exists between two chiral conformers, the molecule is not chiral. • Judge chirality by looking at the most symmetrical conformer. • Cyclohexane can be considered to be planar, on average.
  • 29. Chapter 5 29 Chirality of Conformational Isomers The two chair conformations of cis-1,2-dibromocyclohexane are nonsuperimposable, but the interconversion is fast and the molecules are in equilibrium. Any sample would be racemic and, as such, optically inactive.
  • 30. Chapter 5 30 Nonmobile Conformers • The planar conformation of the biphenyl derivative is too sterically crowded. The compound has no rotation around the central C—C bond and thus it is conformationally locked. • The staggered conformations are chiral: They are nonsuperimposable mirror images.
  • 31. Chapter 5 31 Allenes • Some allenes are chiral even though they do not have a chiral carbon. • Central carbon is sp hybridized. • To be chiral, the groups at the end carbons must have different groups.
  • 33. Chapter 5 33 Fischer Projections • Flat representation of a 3-D molecule. • A chiral carbon is at the intersection of horizontal and vertical lines. • Horizontal lines are forward, out-of-plane. • Vertical lines are behind the plane.
  • 34. Chapter 5 34 Fischer Projections (Continued)
  • 35. Chapter 5 35 Fischer Rules • Carbon chain is on the vertical line. • Highest oxidized carbon is at top. • Rotation of 180 in plane doesn’t change molecule. • Do not rotate 90 !
  • 36. Chapter 5 36 180 Rotation • A rotation of 180 is allowed because it will not change the configuration.
  • 37. Chapter 5 37 90 Rotation • A 90 rotation will change the orientation of the horizontal and vertical groups. • Do not rotate a Fischer projection 90 .
  • 38. Chapter 5 38 Fischer Mirror Images • Fisher projections are easy to draw and make it easier to find enantiomers and internal mirror planes when the molecule has 2 or more chiral centers. CH3 H Cl Cl H CH3
  • 39. Chapter 5 39 Fischer (R) and (S) • Lowest priority (usually H) comes forward, so assignment rules are backwards! • Clockwise 1-2-3 is (S) and counterclockwise 1-2-3 is (R). • Example: (S) (S) CH3 H Cl Cl H CH3
  • 40. Chapter 5 40 Diastereomers • Molecules with two or more chiral carbons. • Stereoisomers that are not mirror images.
  • 41. Chapter 5 41 Alkenes • Cis-trans isomers are not mirror images, so these are diastereomers.
  • 42. Chapter 5 42 Two or More Chiral Carbons • When compounds have two or more chiral centers they have enantiomers, diastereomers, or meso isomers. • Enantiomers have opposite configurations at each corresponding chiral carbon. • Diastereomers have some matching, some opposite configurations. • Meso compounds have internal mirror planes. • Maximum number of isomers is 2n, where n = the number of chiral carbons.
  • 43. Chapter 5 43 Are the structures connected the same?Are the structures connected the same? yesyes nono Are they mirror images?Are they mirror images? Constitutional IsomersConstitutional Isomers yesyes nono EnantiomersEnantiomers All chiral centers willAll chiral centers will be opposite between them.be opposite between them. Is there a plane of symmetry?Is there a plane of symmetry? yesyes nono DiastereomersDiastereomersMesoMeso superimposablesuperimposable Comparing Structures
  • 44. Chapter 5 44 • Meso compounds have a plane of symmetry. • If one image was rotated 180 , then it could be superimposed on the other image. • Meso compounds are achiral even though they have chiral centers. Meso Compounds
  • 45. Chapter 5 45 Number of Stereoisomers The 2n rule will not apply to compounds that may have a plane of symmetry. 2,3-dibromobutane has only 3 stereoisomers: ( ) diastereomer and the meso diastereomer.
  • 46. Chapter 5 46 Properties of Diastereomers • Diastereomers have different physical properties, so they can be easily separated. • Enantiomers differ only in reaction with other chiral molecules and the direction in which polarized light is rotated. • Enantiomers are difficult to separate. • Convert enantiomers into diastereomers to be able to separate them.
  • 47. Chapter 5 47 Resolution of Enantiomers React the racemic mixture with a pure chiral compound, such as tartaric acid, to form diastereomers, then separate them.