That research data should be shared with the rest of the world has become almost evangelical in nature. This paper will try to answer the following questions:
• What are the (real) reasons for ‘forcing’ scientists to open their data, even if they are not ready to do so?
• What right have non-scientists (and scientists) to push indiscriminately for the sharing of data without taking the nuances of research into consideration?
Physical characteristics of research data before it can be shared
Modes of data sharing
Case study: public humiliation in the name of Open Science
Advantages and disadvantages of sharing research data
AI to the rescue of open research articles?
In conclusion
BROWN BAG TALK WITH MICAH ALTMAN INTEGRATING OPEN DATA INTO OPEN ACCESS JOURNALSMicah Altman
This talk, is part of the MIT Program on Information Science brown bag series (http://informatics.mit.edu)
This talk discusses findings from an analysis of data sharing and citation policies in Open Access journals and describes a set of novel tools for open data publication in open access journal workflows. Bring your lunch and enjoy a discussion fit for scholars, Open Access fans, and students alike.
Dr Micah Altman is Director of Research and Head/Scientist, Program on Information Science for the MIT Libraries, at the Massachusetts Institute of Technology.
A open science presentation focusing on the benefits to be gained and basic practices to follow. This was given on behalf of FOSTER at the Open Science Boos(t)camp event at KU Leuven on 24th October 2014.
BROWN BAG TALK WITH MICAH ALTMAN INTEGRATING OPEN DATA INTO OPEN ACCESS JOURNALSMicah Altman
This talk, is part of the MIT Program on Information Science brown bag series (http://informatics.mit.edu)
This talk discusses findings from an analysis of data sharing and citation policies in Open Access journals and describes a set of novel tools for open data publication in open access journal workflows. Bring your lunch and enjoy a discussion fit for scholars, Open Access fans, and students alike.
Dr Micah Altman is Director of Research and Head/Scientist, Program on Information Science for the MIT Libraries, at the Massachusetts Institute of Technology.
A open science presentation focusing on the benefits to be gained and basic practices to follow. This was given on behalf of FOSTER at the Open Science Boos(t)camp event at KU Leuven on 24th October 2014.
Data science remains a high-touch activity, especially in life, physical, and social sciences. Data management and manipulation tasks consume too much bandwidth: Specialized tools and technologies are difficult to use together, issues of scale persist despite the Cambrian explosion of big data systems, and public data sources (including the scientific literature itself) suffer curation and quality problems.
Together, these problems motivate a research agenda around “human-data interaction:” understanding and optimizing how people use and share quantitative information.
I’ll describe some of our ongoing work in this area at the University of Washington eScience Institute.
In the context of the Myria project, we're building a big data "polystore" system that can hide the idiosyncrasies of specialized systems behind a common interface without sacrificing performance. In scientific data curation, we are automatically correcting metadata errors in public data repositories with cooperative machine learning approaches. In the Viziometrics project, we are mining patterns of visual information in the scientific literature using machine vision, machine learning, and graph analytics. In the VizDeck and Voyager projects, we are developing automatic visualization recommendation techniques. In graph analytics, we are working on parallelizing best-of-breed graph clustering algorithms to handle multi-billion-edge graphs.
The common thread in these projects is the goal of democratizing data science techniques, especially in the sciences.
A talk at the Urban Science workshop at the Puget Sound Regional Council July 20 2014 organized by the Northwest Institute for Advanced Computing, a joint effort between Pacific Northwest National Labs and the University of Washington.
Research Data Management Services at UWA (November 2015)Katina Toufexis
Research Data Management Services at the University of Western Australia (November 2015).
Created by Katina Toufexis of the eResearch Support Unit (University Library).
CC-BY
The slides that will accompany my live webcast for OpenCon 2014 attendees, all about open data in research. The benefits, the how to (both legally & technically), examples, pitfalls, and the future of open research data.
These slides run through an Introduction to Open Access and the policy landscape surrounding it. These slides can be seen being presented: https://www.youtube.com/watch?v=5YwASIziPIQ
Slides from Monday 30 July - Data in the Scholarly Communications Life Cycle Course which is part of the FORCE11 Scholarly Communications Institute.
Presenter - Natasha Simons
ContentMining (aka Text and Data Mining TDM) is beneficial, legal in the UK and a few other countries. Many groups in Europe are looking to make it legal there as well but there are many vested interests who oppose it.
This short presentation shows the benefits of content mining, some of the technology, and the way that it can be used and promotedby communities of practice. I urge all attendees at CopyCamp and also the wider world to press for liberalization of Copyright
Open Data in a Big Data World: easy to say, but hard to do?LEARN Project
Presentation at 3rd LEARN workshop on Research Data Management, “Make research data management policies work”
Helsinki, 28 June 2016, by Sarah Callaghan, STFC Rutherford Appleton Laboratory
Thinking about Open Science practices, data sharing and lifetime, and communication from Climate Scientists. Slides based on a presentation given at the Lunchtime talk sessions from the MetOS Section, Department of Geosciences, University of Oslo, November 12th 2015.
Data science remains a high-touch activity, especially in life, physical, and social sciences. Data management and manipulation tasks consume too much bandwidth: Specialized tools and technologies are difficult to use together, issues of scale persist despite the Cambrian explosion of big data systems, and public data sources (including the scientific literature itself) suffer curation and quality problems.
Together, these problems motivate a research agenda around “human-data interaction:” understanding and optimizing how people use and share quantitative information.
I’ll describe some of our ongoing work in this area at the University of Washington eScience Institute.
In the context of the Myria project, we're building a big data "polystore" system that can hide the idiosyncrasies of specialized systems behind a common interface without sacrificing performance. In scientific data curation, we are automatically correcting metadata errors in public data repositories with cooperative machine learning approaches. In the Viziometrics project, we are mining patterns of visual information in the scientific literature using machine vision, machine learning, and graph analytics. In the VizDeck and Voyager projects, we are developing automatic visualization recommendation techniques. In graph analytics, we are working on parallelizing best-of-breed graph clustering algorithms to handle multi-billion-edge graphs.
The common thread in these projects is the goal of democratizing data science techniques, especially in the sciences.
A talk at the Urban Science workshop at the Puget Sound Regional Council July 20 2014 organized by the Northwest Institute for Advanced Computing, a joint effort between Pacific Northwest National Labs and the University of Washington.
Research Data Management Services at UWA (November 2015)Katina Toufexis
Research Data Management Services at the University of Western Australia (November 2015).
Created by Katina Toufexis of the eResearch Support Unit (University Library).
CC-BY
The slides that will accompany my live webcast for OpenCon 2014 attendees, all about open data in research. The benefits, the how to (both legally & technically), examples, pitfalls, and the future of open research data.
These slides run through an Introduction to Open Access and the policy landscape surrounding it. These slides can be seen being presented: https://www.youtube.com/watch?v=5YwASIziPIQ
Slides from Monday 30 July - Data in the Scholarly Communications Life Cycle Course which is part of the FORCE11 Scholarly Communications Institute.
Presenter - Natasha Simons
ContentMining (aka Text and Data Mining TDM) is beneficial, legal in the UK and a few other countries. Many groups in Europe are looking to make it legal there as well but there are many vested interests who oppose it.
This short presentation shows the benefits of content mining, some of the technology, and the way that it can be used and promotedby communities of practice. I urge all attendees at CopyCamp and also the wider world to press for liberalization of Copyright
Open Data in a Big Data World: easy to say, but hard to do?LEARN Project
Presentation at 3rd LEARN workshop on Research Data Management, “Make research data management policies work”
Helsinki, 28 June 2016, by Sarah Callaghan, STFC Rutherford Appleton Laboratory
Thinking about Open Science practices, data sharing and lifetime, and communication from Climate Scientists. Slides based on a presentation given at the Lunchtime talk sessions from the MetOS Section, Department of Geosciences, University of Oslo, November 12th 2015.
Jonathan Tedds Distinguished Lecture at DLab, UC Berkeley, 12 Sep 2013: "The ...Jonathan Tedds
http://dlab.berkeley.edu/event/open-research-challenge-peer-review-and-publication-research-data
A talk by Dr. Jonathan Tedds, Senior Research Fellow, D2K Data to Knowledge, Dept of Health Sciences, University of Leicester.
PI: #BRISSKit www.brisskit.le.ac.uk
PI: #PREPARDE www.le.ac.uk/projects/preparde
The Peer REview for Publication & Accreditation of Research data in the Earth sciences (PREPARDE) project seeks to capture the processes and procedures required to publish a scientific dataset, ranging from ingestion into a data repository, through to formal publication in a data journal. It will also address key issues arising in the data publication paradigm, namely, how does one peer-review a dataset, what criteria are needed for a repository to be considered objectively trustworthy, and how can datasets and journal publications be effectively cross-linked for the benefit of the wider research community.
I will discuss this and alternative approaches to research data management and publishing through examples in astronomy, biomedical and interdisciplinary research including the arts and humanities. Who can help in the long tail of research if lacking established data centers, archives or adequate institutional support? How much can we transfer from the so called “big data” sciences to other settings and where does the institution fit in with all this? What about software?
Publishing research data brings a wide and differing range of challenges for all involved, whatever the discipline. In PREPARDE we also considered the pre and post publication peer review paradigm, as implemented in the F1000 Research Publishing Model for the life sciences. Finally, in an era of truly international research how might we coordinate the many institutional, regional, national and international initiatives – has the time come for an international Research Data Alliance?
Elsevier CWTS Open Data Report Presentation at RDA meeting in Barcelona Elsevier
The Open Data report is a result of a year-long, co-conducted study between Elsevier and the Centre for Science and Technology Studies (CWTS), part of Leiden University, the Netherlands. The study is based on a complementary methods approach consisting of a quantitative analysis of bibliometric and publication data, a global survey of 1,200 researchers and three case studies including in-depth interviews with key individuals involved in data collection, analysis and deposition in the fields of soil science, human genetics and digital humanities.
Open science as roadmap to better data science researchBeth Plale
Open science is a principle -- of openness -- applied to scientific research and its products which include data and software. Its objective is to accelerate the dissemination of fundamental research results that will “advance the frontiers of knowledge and help ensure the nation’s future prosperity.” Open science has both socio- and technical- components to it. It urges from scientists more attention to research processes, more thought to subsequent uses of data, and more thought to the reproducibility and replicability of one’s work. It urges computational infrastructure to be more responsive to reproducibility. It urges science communities to value their data gems. As it is rare for data science research to not involve actual data nor software, and at times it requires large amounts of both, the principles of open science are particularly relevant to data science. In this talk I discuss open science in data science and show that open science equates to good science that in the end benefits us all.
The State of Open Data Report by @figshare.
A selection of analyses and articles about open data, curated by Figshare
Foreword by Professor Sir Nigel Shadbolt
OCTOBER 2016
Curating the Scholarly Record: Data Management and Research LibrariesKeith Webster
Presentation at the National Data Service Conference "New Frontiers in Data Discovery: Collaboration with Research Libraries.", Pittsburgh, 20 October 2016
Open science curriculum for students, June 2019Dag Endresen
Living Norway seminar on Open Science in Trondheim 12th June 2019.
https://livingnorway.no/2019/04/26/living-norway-seminar-2019/
https://www.gbif.no/events/2019/living-norway-seminar.html
From Open Data to Open Science, by Geoffrey BoultonLEARN Project
1st LEARN Workshop. Embedding Research Data as part of the research cycle. 29 Jan 2016. Presentation by Geoffrey Boulton, University of Edinburgh & CODATA
E safety for kids: curriculum, lessons, resourcesheila1
Part of a planned course for school children on Digital Literacy.
Click Clever, Click Save: UK Child Internet Safety Strategy
E-safety support lesson plans
Australian lesson plans for secondary classes
Childnet International Resources
e-Safety Brochure
Building a digital scholarship centre on the successes of a Library Makerspaceheila1
Introduction
The University of Pretoria (UP) Library MakerSpace
Rationale
Services
Successes
Why a Digital Scholarship Centre (in the Library)?
Rationale
Examples
Services
Expanding the Library MakerSpace concept to create an UP Library Digital Scholarship Centre?
Digital Scholarship services that our MakerSpace / Digital Scholarship Centre can deliver currently
In conclusion
What does it take to become a 4 x 4 librarian? Implementing the Overdirve e-B...heila1
the UP library 4 x 4 team; decision time - why? and is it affordable?; contacting overdrive; managing the project; choosing the titles; setting up the system; upload of patron data to overdrive; linking overdrive to the Library web; training: library staff and clients; marketing overdrive 2012; teamwork and stretching of roles
Research data management at the University of Pretoria: a case studyheila1
definitions; why manage research data; research data life cycle; chronological developments; survey on essential data; recommendations; pilot studies; example of a doctoral student's data; long-term preservation
'Makerspaces': should South Africa join the hype?heila1
Makerspaces and 3D printing; innovation; diy movement; maker movement; university library; teaching and learning; research; fab lab; make it @ your library;
Developing an institutional research management plan: guidelinesheila1
Research data cycle; what is a data management plan;benefits of a rdm plan; the two best known international rdm plans; examples of university rdm plans; guidelines
What researchers want with regard to research data management (RDM)heila1
Surveys, Surveys: Survey at UP 2010, Survey at UP 2013
Survey at CSIR 2013
RDM pilots @ UP
Started with one pilot; other researchers followed
What next?
What is Open Science / Open Research?; Initiative of the European Union (EU); Elements of Open Science: open research process / cycle; open access (open repositories); open data; open source software; open notebook / lab book; open workflows; open reputation systems; citizen science; relationship between open research and e-research; open science in Africa and South Africa
Changing research workflows at the University of Pretoria (UP) and the CSIR: ...heila1
background of the international survey; the survey: international, UP, CSIR); example of the survey; examples of the results (data); international, UP and CSIR trends; What should the role of the research library be? Changing landscape of scholarly communication; research workflow tools;
Mobilising a nation: RDM education and training in South Africaheila1
Big data; small data; case study; SKA, research data management; university libraries; NeDICC; NRF announcement; UCT, UP, Wits; training intervention; DCC; Carnegie
Criteria and evaluation of research data repository platforms @ the Universit...heila1
project scope and project team, research data life cycle, e-research framework; product investigation, criteria and evaluation, recommendations, next steps, documents produced; collaboration university library and IT
The Art Pastor's Guide to Sabbath | Steve ThomasonSteve Thomason
What is the purpose of the Sabbath Law in the Torah. It is interesting to compare how the context of the law shifts from Exodus to Deuteronomy. Who gets to rest, and why?
We all have good and bad thoughts from time to time and situation to situation. We are bombarded daily with spiraling thoughts(both negative and positive) creating all-consuming feel , making us difficult to manage with associated suffering. Good thoughts are like our Mob Signal (Positive thought) amidst noise(negative thought) in the atmosphere. Negative thoughts like noise outweigh positive thoughts. These thoughts often create unwanted confusion, trouble, stress and frustration in our mind as well as chaos in our physical world. Negative thoughts are also known as “distorted thinking”.
Welcome to TechSoup New Member Orientation and Q&A (May 2024).pdfTechSoup
In this webinar you will learn how your organization can access TechSoup's wide variety of product discount and donation programs. From hardware to software, we'll give you a tour of the tools available to help your nonprofit with productivity, collaboration, financial management, donor tracking, security, and more.
The Roman Empire A Historical Colossus.pdfkaushalkr1407
The Roman Empire, a vast and enduring power, stands as one of history's most remarkable civilizations, leaving an indelible imprint on the world. It emerged from the Roman Republic, transitioning into an imperial powerhouse under the leadership of Augustus Caesar in 27 BCE. This transformation marked the beginning of an era defined by unprecedented territorial expansion, architectural marvels, and profound cultural influence.
The empire's roots lie in the city of Rome, founded, according to legend, by Romulus in 753 BCE. Over centuries, Rome evolved from a small settlement to a formidable republic, characterized by a complex political system with elected officials and checks on power. However, internal strife, class conflicts, and military ambitions paved the way for the end of the Republic. Julius Caesar’s dictatorship and subsequent assassination in 44 BCE created a power vacuum, leading to a civil war. Octavian, later Augustus, emerged victorious, heralding the Roman Empire’s birth.
Under Augustus, the empire experienced the Pax Romana, a 200-year period of relative peace and stability. Augustus reformed the military, established efficient administrative systems, and initiated grand construction projects. The empire's borders expanded, encompassing territories from Britain to Egypt and from Spain to the Euphrates. Roman legions, renowned for their discipline and engineering prowess, secured and maintained these vast territories, building roads, fortifications, and cities that facilitated control and integration.
The Roman Empire’s society was hierarchical, with a rigid class system. At the top were the patricians, wealthy elites who held significant political power. Below them were the plebeians, free citizens with limited political influence, and the vast numbers of slaves who formed the backbone of the economy. The family unit was central, governed by the paterfamilias, the male head who held absolute authority.
Culturally, the Romans were eclectic, absorbing and adapting elements from the civilizations they encountered, particularly the Greeks. Roman art, literature, and philosophy reflected this synthesis, creating a rich cultural tapestry. Latin, the Roman language, became the lingua franca of the Western world, influencing numerous modern languages.
Roman architecture and engineering achievements were monumental. They perfected the arch, vault, and dome, constructing enduring structures like the Colosseum, Pantheon, and aqueducts. These engineering marvels not only showcased Roman ingenuity but also served practical purposes, from public entertainment to water supply.
Ethnobotany and Ethnopharmacology:
Ethnobotany in herbal drug evaluation,
Impact of Ethnobotany in traditional medicine,
New development in herbals,
Bio-prospecting tools for drug discovery,
Role of Ethnopharmacology in drug evaluation,
Reverse Pharmacology.
Model Attribute Check Company Auto PropertyCeline George
In Odoo, the multi-company feature allows you to manage multiple companies within a single Odoo database instance. Each company can have its own configurations while still sharing common resources such as products, customers, and suppliers.
Palestine last event orientationfvgnh .pptxRaedMohamed3
An EFL lesson about the current events in Palestine. It is intended to be for intermediate students who wish to increase their listening skills through a short lesson in power point.
The world of research data: when should data be closed, shared or open
1. The world of
research data:
when should
data be closed,
shared or open
Dr Heila Pienaar
Deputy Director: Strategic Innovation
UP Library Services
2. Content
– Physical characteristics of research data before it can be shared
– Modes of data sharing
– Case study: public humiliation in the name of Open Science
– Advantages and disadvantages of sharing research data
– AI to the rescue of open research articles?
– In conclusion
3. Characteristics of research data
before it can be shared
– Not all research data are digitally born
– Research data must be digital in order to be able to preserve & share it (this is
often not the case)
– Research data must be uploaded to a digital system / database / repository to
make general sharing possible
– Research data must be packaged in a format for ease of download and use
(meta-data; provenance)
– Analysis software programmes should be provided with the research data
(with instructions)
5. Modes of data sharing
– Once data is collected and analysed, it can be released in a variety
of ways:
– closed networks within an organisation or project
– to researchers working on the same topic (‘invisible colleges’)
– to platform-dependent sharing between peer organisations
– to publishing with closed licenses
– to publishing openly but with permission
– to publishing with fully open licenses
6. Case study: public humiliation in
the name of Open Science
– How freely should scientists share their data – a case study by Daniel Barron on
August 13, 2018 https://www.natureindex.com/news-blog/how-freely-should-
scientists-share-their-data
– Jack Gallant is a cognitive neuroscientist at the University of California,
Berkeley
– In 2011 he showed that he could—based only on measures of brain activity—
actually reconstruct images of movies people were watching
– In 2016 he showed what listening to the Moth podcast does to our brains. His
analysis of the Moth podcast was published in Nature (Moth podcast – true
stories told live)
9. Publicly humiliated on Twitter
– Manilo De Domenico a theoretical physicist, tweeted, “We keep trying to ask
access to data used in your nature 2016, but we received not a single reply, yet.”
– Gallant replied. “The original authors are still writing further primary research
papers on these data so they haven't been released yet but we expect to be
able to do that very soon.”
– “‘We still want exclusivity to publish more papers’ isn’t a great excuse. Did you
note data restrictions in the manuscript?” tweeted Andre Brown, referring to
Nature’s policy that, on publication, authors should make their data, code and
protocols “promptly” and publicly available
10. • Domenico lamented that Gallant’s paper had given him a
series of ideas that he wanted to test but couldn’t
because he needed Gallant’s data, “This is not advancing
human knowledge,” de Domenico asserted.
• Gallant dug in: “And why do you assume that your project
is better than the ones that we are continuing with these
data? My students and postdocs are an awesome group
of people, the stuff they have in the pipeline is great! But
I can’t afford for them to be scooped.”
11. Barron (blog writer) questions
the ideals of Open Science
– A highly-productive lab writes a grant to fund a series of studies and the
development of new tools. They spend years collecting data and building the tools
for these proposed studies
– Then, they finish a portion of the project and begin to publish results. Should they
be required to release their data to the community? If so, when? Who owns that
data? And what business do journals have in enforcing data sharing?
– Barron is questioning the role of publishers and journals in the open data debate – is
it their role to force the sharing of research data? Barron remains unconvinced that
there is an immediacy to sharing most forms of scientific data—especially an
immediacy in the name of the public interest
– I am convinced that other scientists feel an immediate need to analyse data sets
that they do not own—especially if the results of a particularly excellent data set
can be published in Nature and make them famous
12. I also heard cautionary tales that the Open Science
movement had a dark side, that “openness” had, at
times, devolved into bullying and theft. Some
compared the Open Science movement to
Communism: good in principle, impossible in
practice. In informal settings — at dinner, over
drinks — I was reminded that science was a
competitive business
13. Advantages & disadvantages of
sharing research data
– It seems that there are two types of research results that should be shared as
soon as it is possible, i.e. clinical trial data and rare-diseases research.
– A framework for responsible sharing of clinical trial data has been developed in
order to maximize benefits to participants in clinical trials and to society, while
minimizing harm. https://www.ncbi.nlm.nih.gov/books/NBK253390/
– Rare-disease families’ access to medical research is very problematic. If these
families can’t afford subscription fees they have to navigate a variety of
gatekeeping mechanisms in order to access research that could help them make
critical health decisions. “Yes, everyone should have rainbows, unicorns, &
puppies delivered to their doorstep by volunteers. Y’all keep wishing for that, I’ll
keep working on producing the best knowledge and distributing it as best we
can.” Quote by an Elsevier official – later retracted ….
https://slate.com/technology/2018/08/who-gets-to-read-the-research-
taxpayers-fund.html
14. Advantages
– To maximize the impact of data (or conclusions drawn from it). Scientists base their research
on foundations laid by other scientists, e.g. scientific theories proven by other scientists and
research data collected by other scientists.
– Sharing data reduces both the cost of data collection and the overall cost of research
– The use of common data bases allows scientists to test and retest their findings against those
of other scientists and promotes progress in science
http://sites.nationalacademies.org/cs/groups/pgasite/documents/webpage/pga_053478.pdf
– Inform collaboration
– Provide stronger evidence for advocacy
– Increase efficiency of service delivery among a wider audience than just within your project
– Play role in decision making within other projects
– Publishing your data can also allow people who might not have otherwise been well-informed
enough about your project, to have a say - for example, those who are reflected in the data
15. Disadvantages
– Once data is published, it’s impossible to anticipate how it might be shared
further, and once it’s out in the open, there’s no telling how it will be adopted,
re-purposed and re-used for any number of purposes
– Ethical and practical implications, e.g. a group of people could be identified in
spite of anonymising personal information
– Participants seeing that their data is used in a way they don’t agree with, or that
puts them in danger
– Researchers should carefully consider the implications of sharing, whether to
share at all, and the licensing conditions or terms and tools that you can use to
reduce the risk of harm, while still permitting beneficial outcomes
https://responsibledata.io/resources/handbook/chapters/chapter-02c-sharing-
data.html
16. AI to the rescue of open research
articles, and perhaps open research
data at a later stage?
– Researchers who are busy with specialised research sometimes query the open
access movement as they are of the opinion that few people will understand their
work
– Impactstory to the rescue - Get The Research: Impactstory announces a new
Science-Finding tool for the general public (https://gettheresearch.org)
– It is aimed at serving the general public rather than an audience of scholars and
specialists, and it promises to provide a new level of accessibility to published
scholarship.
– It will be built on the 20 million open access articles in the Unpaywall
(http://unpaywall.org) index, and feature AI-powered tools that help make the
content and context of scholarly articles more clear to readers.
https://scholarlykitchen.sspnet.org/2018/11/12/get-the-research-impactstory-
announces-a-new-science-finding-tool-for-the-general-public/
17. In conclusion
Sharing of data is highly dependent on the type of
research, the type of data and most importantly, the
requirements of the funder for that specific research.
Open data / Open Science should not be cast in stone, but
should be implemented with great care in order not to
damage the scientific enterprise