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Spatial analysis to identify risk areas
   of an important animal disease
 (Highly Pathogenic Avian Influenza)
  and to evaluate current strategy
   in health surveillance in Europe



Irene Iglesias iglesias@inia.es
 Marta Martínez
 Ana de la Torre
Mª Jesús Muñoz
JM Sánchez-Vizcaíno

(CISA-INIA     UCM)
Animal diseases control




Affected animals and.....:
    Trade in animal products
    Vaccines
    Control of disease: loss of livestock, compensation, health costs
    Public confidence
    ......
Animal diseases control




                           Tuberculosis
               Zoonotics   Salmonella
                           Avian Influenza
                           …
Animal diseases control


                  Affected countries: stop spread




                    Free countries: early detection




                                    Preventive
                                    surveillance
Animal diseases control: SURVEILLANCE




   random sampling
       system


                                   Preventive
                                   surveillance
Animal diseases control: SURVEILLANCE
  massive expansion
   avian influenza




                                         TARGET
                                       SURVEILLANCE
                                            Risk
                                        assessment




   random sampling
       system


                                       Preventive
                      EC 2010/367/EU
                                       surveillance
Animal diseases control: SURVEILLANCE




                                          TARGET
                                        SURVEILLANCE
                                             Risk
                                         assessment



                  G.I.S.
                Spatial analysis:
                   Exploring data
                   Risk assessment
                                        Preventive
                   Modelling diseases   surveillance
HighlyPathogenicAvianInfluenza
        ( SubtypeH5N1)
                           • Affected countries (2004-2010)
has killed ≈ 400 million domestic birds




artsandopinion.com          new.dpi.vic.gov.au        Cbc.ca




     High economic losses ≈ ($20 billion)

                     Social alarm :332 fatal human cases


                                   HighlyPathogenicAvianInfluenza
                                           ( SubtypeH5N1)
• has killed ≈ 400 million domestic birds


The main difference...




            Natural reservoir Affected birds

             Has killed ≈ 15.000 waterbirds


                     Highly Pathogenic Avian Influenza
                              ( Subtype H5N1)
In the last 4 years...




Spread in Europe            •Trade poultry
                            •Migrationrouteswaterbirds
       HighlyPathogenicAvianInfluenza
               ( SubtypeH5N1)
Spatial analysis to identify risk areas
of Highly Pathogenic Avian Influenza
 and to evaluate current strategy of
    health surveillance in Europe
Spatial analysis process: Modelling



      Data base




    Visualization



    Exploration

                       Statistics
                                      Useful & efficient decision-
     Modelling                         making tool for different
                                      epidemiological situations
                                           in animal health
Data base




   Avian Influenza         Avian Influenza
Cases in domestic birds   Cases in wildbirds   Modelling with G.I.S.




   Domestic birds              Wildbirds
Census/farms/location       Census/location
WHERE should we do an efficient surveillance of
      Avian Influenza in wildbirds???




                                                    TARGET
                                                  SURVEILLANCE
Spatial analysis to identify risk areas
of Highly Pathogenic Avian Influenza
            in waterbirds
Importance of wetlands in spread of Avian _Influenza
1. Infected water represents a recognized mechanism for the virus transmission
   within waterbird populations
2. Wetlands concentrate many waterbirds species → Increasing the risk of infection
Modelizationof ENVIRONMENTAL RISK FACTOR for European WETLANDS


Ramsar European Wetlands (Wetlands.org)
                                                      Distances
Avian influenza cases in wild birds (06-09)

!
(   Ramsar wetland
     Wetlands
    Wildbirds outbreaks
     Outbreaks
                                                      Infected wetlands
    “Positive wetland”
     Infected wetlands
    Europe



                                                                      16Km




                                                  •    Analysis tools
                                                  •    Spatial analysis
Modelizationof ENVIRONMENTAL RISK FACTOR for European WETLANDS


                                        Water: Salinity, permanence
                                        organic or mineral soil, ....

Study wetlands characteristics          Land Use: Forestry, hunting,
                                        Agriculture, aquaculture,...

                                        Biological: Wintering birds area,
 Logistic regression                    species, important area for fish..
      analysis



      •Mixosaline water

      •Forestry around wetland

      •Wintering waterbird area                       •   Analysis tools
                                                      •   Spatial analysis

           Identification of risk factors
                                                  •   Logistic regression
Risk map for ocurrence of Avian Influenza in wildbirds

   Logistic regression model
                               GERMANY
  !   Ramsar wetland
  (
                               2009
      Waterbird cases

      “Infected wetlands”
      Europa




                                   ROMANIA 2010


                                   BULGARIA
                                     2010
     USEFUL
  INFORMATION                              •   Spatial analysis:
    ON TARGET                                        Kernel
  SURVEILLANCE
Aplication of the model a national level: Spain
             Logistic regression model         Increased Nº wetlands
                                         •Wetlands Ramsar+Spanish Wetlands
                                                    (NationalDatabase)




                                             Interpolate data model : IDW
                                              (Inverse Distance Weighting)
                             Provinces
                       Risk of model
                            High: 0.83
                            Low:0.10


      Survival by temperature analysis
                                             Adjust risk by climatic data
                                              ( temperature analysis)
              Survival curve




                                                        •   Geostatistical analysis:
                                                              IDW
MCD           Logistic regression model
  Multicriteria
   Decision:




                                                                                    Salburua

                                                           Wildbird case in Pais Vasco (2006)

                                                                           Almoguera
                                                                           Farm affected
                                                                           contact with wildbirds
                                                                           (2009)


                                           Provinces


                                   Risk values (October)
                                                October)
                                           High

                                           Low                      •    Spatial analysis:
                                           Europe
                                                                           Math
Risk of ocurrence of Avian Influenza in
              wildbirds
MCD           Logistic regression model
  Multicriteria                                                      USEFUL
   Decision:                                                      INFORMATION
                                                                     IMPROVE
                                                                  SURVEILLANCE
                                                                     PLANS


                                                             2006 High Surveillance Areas
                                                           Of the National surveillance Plan
                                                           (Ministery Agriculture and Food)




                                           Provinces


                                   Risk values (October)
                                                October)
                                           High

                                           Low
                                           Europe


Risk of ocurrence of Avian Influenza in
              wildbirds
Spatial analysis to EVALUATE current
strategy in health surveillance in Europe.
Probability of ocurrence of Avian Influenza

     Test points               Co-kriging
Avian Influenza cases




                                           + co-variable
                                    Wetlands (>20.000 Waterbirds)




                                               •   Geostatistical analysis:
                                                     Co-kriging
                         + co-variante
                         Poultry density
Probability of ocurrence of Avian Influenza

                Co-kriging




                               •   Geostatistical analysis:
                                     Co-kriging
Probability of ocurrence of Avian Influenza

                                  Co-kriging
                                                      USEFUL
                                                   INFORMATION
                                                      EVALUATE
                                                   SURVEILLANCE
                                                    STRATEGIES
             NL
                   DE




        SP




Sampling> Risk Avian Influenza
                                    $              •   Geostatistical analysis:
                                                         Co-kriging

Sampling< Risk Avian Influenza      $
                                               •   Spearman’s coefficient
                                               •   Grubb’s test, P<0.01
CONCLUSIONS

     Spatial Analysis is an essential tool for Animal Health
                  Veterinary Authorities and
                        Organisations

 Help to take decisions for TARGET SURVEILLANCE (According to EC
                           recommendations)

      Identify HOT SPOT of RISK   Adequate control mesures

   Increase INFORMATION about dynamic of diseases improve
PREVENTION & CONTROL PLANS Prevent or reduce consequences
           EVALUATE control and prevention strategies




Reduce health costs and improve efficiency
        of veterinary intervention
Financial support: CC08-020, FAU2008-00001-C02-01
Laguna de Pitillas (Navarra) http://www.navarra.es/home_es/Actualidad/Informes

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Spatial Analysis to Identify Risk Areas of an Important Animal Disease (Highly Pathogenic Avian Influenza) and to Evaluate Current Strategy in Health Surveillance in Europe

  • 1. Spatial analysis to identify risk areas of an important animal disease (Highly Pathogenic Avian Influenza) and to evaluate current strategy in health surveillance in Europe Irene Iglesias iglesias@inia.es Marta Martínez Ana de la Torre Mª Jesús Muñoz JM Sánchez-Vizcaíno (CISA-INIA UCM)
  • 2. Animal diseases control Affected animals and.....: Trade in animal products Vaccines Control of disease: loss of livestock, compensation, health costs Public confidence ......
  • 3. Animal diseases control Tuberculosis Zoonotics Salmonella Avian Influenza …
  • 4. Animal diseases control Affected countries: stop spread Free countries: early detection Preventive surveillance
  • 5. Animal diseases control: SURVEILLANCE random sampling system Preventive surveillance
  • 6. Animal diseases control: SURVEILLANCE massive expansion avian influenza TARGET SURVEILLANCE Risk assessment random sampling system Preventive EC 2010/367/EU surveillance
  • 7. Animal diseases control: SURVEILLANCE TARGET SURVEILLANCE Risk assessment G.I.S. Spatial analysis: Exploring data Risk assessment Preventive Modelling diseases surveillance
  • 8. HighlyPathogenicAvianInfluenza ( SubtypeH5N1) • Affected countries (2004-2010)
  • 9. has killed ≈ 400 million domestic birds artsandopinion.com new.dpi.vic.gov.au Cbc.ca High economic losses ≈ ($20 billion) Social alarm :332 fatal human cases HighlyPathogenicAvianInfluenza ( SubtypeH5N1)
  • 10. • has killed ≈ 400 million domestic birds The main difference... Natural reservoir Affected birds Has killed ≈ 15.000 waterbirds Highly Pathogenic Avian Influenza ( Subtype H5N1)
  • 11. In the last 4 years... Spread in Europe •Trade poultry •Migrationrouteswaterbirds HighlyPathogenicAvianInfluenza ( SubtypeH5N1)
  • 12. Spatial analysis to identify risk areas of Highly Pathogenic Avian Influenza and to evaluate current strategy of health surveillance in Europe
  • 13. Spatial analysis process: Modelling Data base Visualization Exploration Statistics Useful & efficient decision- Modelling making tool for different epidemiological situations in animal health
  • 14. Data base Avian Influenza Avian Influenza Cases in domestic birds Cases in wildbirds Modelling with G.I.S. Domestic birds Wildbirds Census/farms/location Census/location
  • 15. WHERE should we do an efficient surveillance of Avian Influenza in wildbirds??? TARGET SURVEILLANCE
  • 16. Spatial analysis to identify risk areas of Highly Pathogenic Avian Influenza in waterbirds
  • 17. Importance of wetlands in spread of Avian _Influenza 1. Infected water represents a recognized mechanism for the virus transmission within waterbird populations 2. Wetlands concentrate many waterbirds species → Increasing the risk of infection
  • 18. Modelizationof ENVIRONMENTAL RISK FACTOR for European WETLANDS Ramsar European Wetlands (Wetlands.org) Distances Avian influenza cases in wild birds (06-09) ! ( Ramsar wetland Wetlands Wildbirds outbreaks Outbreaks Infected wetlands “Positive wetland” Infected wetlands Europe 16Km • Analysis tools • Spatial analysis
  • 19. Modelizationof ENVIRONMENTAL RISK FACTOR for European WETLANDS Water: Salinity, permanence organic or mineral soil, .... Study wetlands characteristics Land Use: Forestry, hunting, Agriculture, aquaculture,... Biological: Wintering birds area, Logistic regression species, important area for fish.. analysis •Mixosaline water •Forestry around wetland •Wintering waterbird area • Analysis tools • Spatial analysis Identification of risk factors • Logistic regression
  • 20. Risk map for ocurrence of Avian Influenza in wildbirds Logistic regression model GERMANY ! Ramsar wetland ( 2009 Waterbird cases “Infected wetlands” Europa ROMANIA 2010 BULGARIA 2010 USEFUL INFORMATION • Spatial analysis: ON TARGET Kernel SURVEILLANCE
  • 21. Aplication of the model a national level: Spain Logistic regression model Increased Nº wetlands •Wetlands Ramsar+Spanish Wetlands (NationalDatabase) Interpolate data model : IDW (Inverse Distance Weighting) Provinces Risk of model High: 0.83 Low:0.10 Survival by temperature analysis Adjust risk by climatic data ( temperature analysis) Survival curve • Geostatistical analysis: IDW
  • 22. MCD Logistic regression model Multicriteria Decision: Salburua Wildbird case in Pais Vasco (2006) Almoguera Farm affected contact with wildbirds (2009) Provinces Risk values (October) October) High Low • Spatial analysis: Europe Math Risk of ocurrence of Avian Influenza in wildbirds
  • 23. MCD Logistic regression model Multicriteria USEFUL Decision: INFORMATION IMPROVE SURVEILLANCE PLANS 2006 High Surveillance Areas Of the National surveillance Plan (Ministery Agriculture and Food) Provinces Risk values (October) October) High Low Europe Risk of ocurrence of Avian Influenza in wildbirds
  • 24. Spatial analysis to EVALUATE current strategy in health surveillance in Europe.
  • 25. Probability of ocurrence of Avian Influenza Test points Co-kriging Avian Influenza cases + co-variable Wetlands (>20.000 Waterbirds) • Geostatistical analysis: Co-kriging + co-variante Poultry density
  • 26. Probability of ocurrence of Avian Influenza Co-kriging • Geostatistical analysis: Co-kriging
  • 27. Probability of ocurrence of Avian Influenza Co-kriging USEFUL INFORMATION EVALUATE SURVEILLANCE STRATEGIES NL DE SP Sampling> Risk Avian Influenza $ • Geostatistical analysis: Co-kriging Sampling< Risk Avian Influenza $ • Spearman’s coefficient • Grubb’s test, P<0.01
  • 28. CONCLUSIONS Spatial Analysis is an essential tool for Animal Health Veterinary Authorities and Organisations Help to take decisions for TARGET SURVEILLANCE (According to EC recommendations) Identify HOT SPOT of RISK Adequate control mesures Increase INFORMATION about dynamic of diseases improve PREVENTION & CONTROL PLANS Prevent or reduce consequences EVALUATE control and prevention strategies Reduce health costs and improve efficiency of veterinary intervention
  • 29. Financial support: CC08-020, FAU2008-00001-C02-01 Laguna de Pitillas (Navarra) http://www.navarra.es/home_es/Actualidad/Informes