Presented to Wildlife Institute of India, treating each step in the process of publishing scientific results, from the basic writing skills to considerations of open access to scientific results.
Next-generation sequencing data format and visualization with ngs.plot 2015Li Shen
An introduction to the commonly used formats for the next-generation sequencing data. ngs.plot is a popular tool for the visualization and data mining of the NGS data.
This presentation shows how to use ENDNOTE software for citation management in different databases.
See also Biomedical Databases Handout and
Engineering Databases Handout in http://www.library.drexel.edu/services/refengineer.html
The document discusses conducting a systematic literature search to minimize bias. It describes searching multiple databases and sources in a thorough, objective and reproducible manner. Key steps include refining the clinical question, developing a search strategy using Boolean logic and Medical Subject Headings (MeSH) terms, searching bibliographic databases like PubMed and the Cochrane Library, and documenting the search strategy.
An Introduction to "Bioinformatics & Internet"Asar Khan
This document provides an introduction to computers and bioinformatics. It defines key concepts like what a computer is, computer hardware, software, programming languages, computer networks, the internet, bioinformatics, and important bioinformatics databases and tools. Specifically, it discusses how computers accept data as input, process it, and provide information as output. It also explains how bioinformatics applies information technology to biological data to receive, analyze and retrieve biological information. Important databases mentioned include NCBI, EMBL, SRS and tools like Entrez.
A new method of Nucleic Acid Sequencing using Nanotechnological Advances with Advantage of Single molecule sequencing, low cost and time requirement, easy to handle
Next-generation sequencing data format and visualization with ngs.plot 2015Li Shen
An introduction to the commonly used formats for the next-generation sequencing data. ngs.plot is a popular tool for the visualization and data mining of the NGS data.
This presentation shows how to use ENDNOTE software for citation management in different databases.
See also Biomedical Databases Handout and
Engineering Databases Handout in http://www.library.drexel.edu/services/refengineer.html
The document discusses conducting a systematic literature search to minimize bias. It describes searching multiple databases and sources in a thorough, objective and reproducible manner. Key steps include refining the clinical question, developing a search strategy using Boolean logic and Medical Subject Headings (MeSH) terms, searching bibliographic databases like PubMed and the Cochrane Library, and documenting the search strategy.
An Introduction to "Bioinformatics & Internet"Asar Khan
This document provides an introduction to computers and bioinformatics. It defines key concepts like what a computer is, computer hardware, software, programming languages, computer networks, the internet, bioinformatics, and important bioinformatics databases and tools. Specifically, it discusses how computers accept data as input, process it, and provide information as output. It also explains how bioinformatics applies information technology to biological data to receive, analyze and retrieve biological information. Important databases mentioned include NCBI, EMBL, SRS and tools like Entrez.
A new method of Nucleic Acid Sequencing using Nanotechnological Advances with Advantage of Single molecule sequencing, low cost and time requirement, easy to handle
This document provides an overview of academic writing. It defines academic writing as the formal writing style used in colleges and universities that is expected of students and researchers. Some key characteristics are a formal tone, precise language, third-person point of view, research focus, logical organization, and inclusion of citations. The document also distinguishes between primary sources as original materials, secondary sources as analyses of primary sources, and tertiary sources as compilations of other sources. Finally, it outlines the essential steps of selecting a topic, researching, developing a thesis, outlining, writing drafts, revising, and proofreading.
This document provides instructions for performing molecular docking simulations using Autodock 4. It discusses downloading and installing Autodock, preparing receptor and ligand files in pdbqt format, setting up a grid parameter file to define the docking grid, preparing an Autodock parameter file to define the docking parameters, running Autodock to perform the docking simulation, and analyzing the results to view and evaluate the predicted binding modes.
Introduction to Systemics with focus on Systems BiologyMrinal Vashisth
The core content discusses the terminology used in Systems Sciences, the systems thinking/approach or Systemics. Focus is kept on Systems Biology for the most part of the presentations where it is compared with other disciplines and examples of Systems Biology approach and challenges of systems science are also discussed.
The sad thing about uploading this to Slide Share is that animations don't work.
This document provides an overview of the structure and components of a thesis. It explains that a thesis is an original piece of research work presented as a requirement for a degree. The typical parts include initial pages like a title page and abstract, as well as chapters that introduce the topic, review related literature, describe the methodology, present findings, and provide a conclusion. It outlines the contents of each chapter, such as stating the problem and significance in Chapter 1, describing the research design and data collection process in Chapter 3, and summarizing key findings and recommendations in Chapter 5. The document serves as a guide for students on how to organize and present their thesis research.
Power point presentation of saminer topic DNA based computingPaushali Sen
This document provides an overview of DNA computing. It discusses how Adleman solved the Hamiltonian path problem using DNA molecules to represent the graph and encode possible paths. The key steps involved encoding the cities as DNA sequences, encoding all possible paths as complementary DNA strands, merging the strands so that complementary bases adhere to represent all possible solutions simultaneously, and using various DNA techniques like PCR and electrophoresis. While DNA computing shows promise for massively parallel processing and energy efficiency, current limitations include error rates and the need for manual intervention.
This document provides an overview of statistical analyses that can be performed in PRISM. It discusses how to perform common statistical tests like t-tests, ANOVA, linear regression, and summarizes the appropriate tests to address different research questions. Examples are given of how to analyze pre-post treatment data using paired t-tests and compare groups using independent t-tests or ANOVA. Guidance is also provided on interpreting results and checking assumptions.
The Sanger method is the standard DNA sequencing technique. It involves using specific enzymes to synthesize DNA fragments of varying lengths that terminate at a particular base, like ddATP, ddTTP, etc. These fragments are then sorted by size using electrophoresis in a gel, where the shorter fragments migrate farther due to their negative charge. Each fragment type is typically tagged with a radioactive probe for identification. Capillary electrophoresis is now commonly used for high-throughput sequencing as it allows for faster separation and analysis of larger DNA samples compared to slab gel electrophoresis.
This document outlines the purpose and structure of a scientific research paper. It explains that the purpose is to disclose research results in a way that allows peers to evaluate the work. The key sections of a research paper are outlined as the title, authors' names, abstract, introduction, materials and methods, results, discussion, conclusion, acknowledgments, and references. The introduction provides background and justification for the study, while the methods, results, and discussion sections present the experimental work. The conclusion summarizes the significance and implications of the findings. References and acknowledgments are included at the end.
DNA is the genetic material found in chromosomes inside cells. It contains the biological instructions that determine traits like eye color. DNA is made of nucleotides with a phosphate group, sugar (deoxyribose), and one of four nitrogenous bases: adenine, guanine, cytosine, or thymine. DNA exists as two strands coiled around each other in the famous double helix structure, with the bases on one strand pairing with their complements on the other strand. Molecular techniques use DNA, RNA, and enzymes to study biology at a molecular level and detect disease states.
Genomic databases are referred to as online repositories of genomic variants, described for a single (locus-specific) or more (general) genes or specifically for a population or ethnic group (national/ethnic).
- MongoDB is an open-source, high-performance, schema-free, document-oriented database. It bridges the gap between key-value stores and traditional relational databases.
- Documents in MongoDB are like JSON documents and can be dynamically updated without migrations. MongoDB supports aggregation, map-reduce functions, and rich queries.
- PyMongo is the Python driver for MongoDB. Documents can be easily inserted, queried, and manipulated from Python. Object-document mappers like MongoEngine allow defining schemas and models similarly to ORMs.
DNA sequencing determines the order of nucleotide bases in a DNA sample. The Sanger method, also known as dideoxy or chain termination method, was the first widely used DNA sequencing technique. It involves DNA polymerase, dNTPs, a primer, and ddNTPs to terminate DNA strand extension. The fragments are separated by gel electrophoresis and the sequence is read. Next-generation sequencing methods like pyrosequencing do not require electrophoresis or fragment separation. They detect incorporated nucleotides in real-time. Nanopore sequencing detects changes in electrical current as single-stranded DNA passes through a nanopore protein.
This document summarizes a seminar presentation on organic nano particles (ONPs) given by Mahdi Mirzaie. It discusses various types of ONPs, methods for their synthesis including mechanical grinding, laser ablation, and chemical methods. It also covers characterization techniques like NMR and properties of ONPs like size-dependent luminescence. Applications discussed include use in drugs, food, sensors and organic light emitting diodes. In conclusion, challenges are noted in stabilizing ONPs and improving synthesis efficiency and costs, as currently grinding is the main manufacturing method.
RNA plays an important role in protein synthesis. It has a primary sequence made of A, C, G, and U nucleotides that can fold into a secondary structure through base pairing. The secondary structure is predicted using either maximizing the number of base pairs or minimizing the free energy. Dynamic programming is commonly used to predict the optimal secondary structure. Predicting RNA structure is important for understanding its function and evolution.
The Galaxy bioinformatics workflow environmentRutger Vos
The document provides an overview of Galaxy, a bioinformatics workflow environment. Galaxy allows users to analyze genomic and other biological data through an easy-to-use web interface without requiring programming skills. It tracks the provenance of analyses and allows workflows to be run, shared, and reproduced. Galaxy supports common data types and file formats, runs tools through job queuing, and stores metadata in a database. The community is involved through mailing lists, tutorials, and events.
The MEGA software is one of the most widely used software tools in molecular taxonomy and bioinformatics. This module describes how MEGA can be employed in a classroom setting to teach the fundamentals of molecular taxonomy.
The essential mission of SRGE toward the research and education in Egypt is to foster learning and promoting research integrity in the current and next generation of researchers in Egypt. SRGE is rededicating itself to this fundamental purpose.
How to write a Scientific Manuscript – Pubrica.pptxPubrica
Writing a scientific manuscript is difficult for even the brightest minds, but it is highly satisfying once the project is completed. Researchers meticulously create manuscripts to share their original ideas and fresh discoveries with the scientific community and the general public.
Learn More : https://bit.ly/3ioFNT1
Reference: https://pubrica.com/
Why Pubrica:
When you order our services, we promise you the following – Plagiarism free | always on Time | 24*7 customer support | Written to international Standard | Unlimited Revisions support | Medical writing Expert | Publication Support | Bio statistical experts | High-quality Subject Matter Experts.
Contact us:
Web: https://pubrica.com/
Blog: https://pubrica.com/academy/
Email: sales@pubrica.com
WhatsApp : +91 9884350006
United Kingdom: +44-1618186353
This document provides information about DNA sequencing methods. It discusses that DNA sequencing determines the precise order of nucleotides in DNA. The two main conventional methods described are the Maxam-Gilbert chemical degradation method and the Sanger chain termination method. The Maxam-Gilbert method uses chemical modification and cleavage of DNA bases. The Sanger method is a PCR-based method that uses dideoxynucleotides to terminate DNA chain elongation. Both methods produce fragmented DNA of different lengths that can be resolved on a gel for sequence determination.
The Gene Ontology (GO) provides a controlled vocabulary for describing gene and gene product attributes across species. It consists of three ontologies covering biological processes, molecular functions, and cellular components. GO terms are organized into a directed acyclic graph structure and can have relationships like "is_a" and "part_of". Genes are annotated with GO terms to capture functional information, which is shared across species to facilitate research. While useful, the GO has some limitations like unclear reasoning principles and lack of validation procedures.
This document provides guidance on publishing academic papers. It discusses why publishing is important, what types of papers one can write, where to target publications, when researchers are ready to publish, who should be authors on a paper, and how to go through the publication process. The key steps outlined are identifying a publication opportunity, framing the paper and its contribution, writing drafts, getting feedback, handling revisions, and submitting the paper before a deadline. Conferences are suggested as a good starting point for getting feedback, while journals have higher standards but provide more lasting recognition. Supervisors can provide guidance on positioning work and navigating the publication process.
Presentation emerald linking research to the benefit of the communityraboudi amina
This document provides guidance on preparing manuscripts for international journals. It discusses key aspects such as choosing the right journal, following the journal's author guidelines, and structuring the manuscript properly. The ideal manuscript length is 25-30 pages and should follow a standard structure of title, abstract, introduction, methods, results, discussion, and conclusions sections. It is important to choose the correct journal type and scope that matches your research, and only submit your manuscript to one journal. The document offers tips for writing clearly and concisely while emphasizing the main points of your research for reviewers.
This document provides an overview of academic writing. It defines academic writing as the formal writing style used in colleges and universities that is expected of students and researchers. Some key characteristics are a formal tone, precise language, third-person point of view, research focus, logical organization, and inclusion of citations. The document also distinguishes between primary sources as original materials, secondary sources as analyses of primary sources, and tertiary sources as compilations of other sources. Finally, it outlines the essential steps of selecting a topic, researching, developing a thesis, outlining, writing drafts, revising, and proofreading.
This document provides instructions for performing molecular docking simulations using Autodock 4. It discusses downloading and installing Autodock, preparing receptor and ligand files in pdbqt format, setting up a grid parameter file to define the docking grid, preparing an Autodock parameter file to define the docking parameters, running Autodock to perform the docking simulation, and analyzing the results to view and evaluate the predicted binding modes.
Introduction to Systemics with focus on Systems BiologyMrinal Vashisth
The core content discusses the terminology used in Systems Sciences, the systems thinking/approach or Systemics. Focus is kept on Systems Biology for the most part of the presentations where it is compared with other disciplines and examples of Systems Biology approach and challenges of systems science are also discussed.
The sad thing about uploading this to Slide Share is that animations don't work.
This document provides an overview of the structure and components of a thesis. It explains that a thesis is an original piece of research work presented as a requirement for a degree. The typical parts include initial pages like a title page and abstract, as well as chapters that introduce the topic, review related literature, describe the methodology, present findings, and provide a conclusion. It outlines the contents of each chapter, such as stating the problem and significance in Chapter 1, describing the research design and data collection process in Chapter 3, and summarizing key findings and recommendations in Chapter 5. The document serves as a guide for students on how to organize and present their thesis research.
Power point presentation of saminer topic DNA based computingPaushali Sen
This document provides an overview of DNA computing. It discusses how Adleman solved the Hamiltonian path problem using DNA molecules to represent the graph and encode possible paths. The key steps involved encoding the cities as DNA sequences, encoding all possible paths as complementary DNA strands, merging the strands so that complementary bases adhere to represent all possible solutions simultaneously, and using various DNA techniques like PCR and electrophoresis. While DNA computing shows promise for massively parallel processing and energy efficiency, current limitations include error rates and the need for manual intervention.
This document provides an overview of statistical analyses that can be performed in PRISM. It discusses how to perform common statistical tests like t-tests, ANOVA, linear regression, and summarizes the appropriate tests to address different research questions. Examples are given of how to analyze pre-post treatment data using paired t-tests and compare groups using independent t-tests or ANOVA. Guidance is also provided on interpreting results and checking assumptions.
The Sanger method is the standard DNA sequencing technique. It involves using specific enzymes to synthesize DNA fragments of varying lengths that terminate at a particular base, like ddATP, ddTTP, etc. These fragments are then sorted by size using electrophoresis in a gel, where the shorter fragments migrate farther due to their negative charge. Each fragment type is typically tagged with a radioactive probe for identification. Capillary electrophoresis is now commonly used for high-throughput sequencing as it allows for faster separation and analysis of larger DNA samples compared to slab gel electrophoresis.
This document outlines the purpose and structure of a scientific research paper. It explains that the purpose is to disclose research results in a way that allows peers to evaluate the work. The key sections of a research paper are outlined as the title, authors' names, abstract, introduction, materials and methods, results, discussion, conclusion, acknowledgments, and references. The introduction provides background and justification for the study, while the methods, results, and discussion sections present the experimental work. The conclusion summarizes the significance and implications of the findings. References and acknowledgments are included at the end.
DNA is the genetic material found in chromosomes inside cells. It contains the biological instructions that determine traits like eye color. DNA is made of nucleotides with a phosphate group, sugar (deoxyribose), and one of four nitrogenous bases: adenine, guanine, cytosine, or thymine. DNA exists as two strands coiled around each other in the famous double helix structure, with the bases on one strand pairing with their complements on the other strand. Molecular techniques use DNA, RNA, and enzymes to study biology at a molecular level and detect disease states.
Genomic databases are referred to as online repositories of genomic variants, described for a single (locus-specific) or more (general) genes or specifically for a population or ethnic group (national/ethnic).
- MongoDB is an open-source, high-performance, schema-free, document-oriented database. It bridges the gap between key-value stores and traditional relational databases.
- Documents in MongoDB are like JSON documents and can be dynamically updated without migrations. MongoDB supports aggregation, map-reduce functions, and rich queries.
- PyMongo is the Python driver for MongoDB. Documents can be easily inserted, queried, and manipulated from Python. Object-document mappers like MongoEngine allow defining schemas and models similarly to ORMs.
DNA sequencing determines the order of nucleotide bases in a DNA sample. The Sanger method, also known as dideoxy or chain termination method, was the first widely used DNA sequencing technique. It involves DNA polymerase, dNTPs, a primer, and ddNTPs to terminate DNA strand extension. The fragments are separated by gel electrophoresis and the sequence is read. Next-generation sequencing methods like pyrosequencing do not require electrophoresis or fragment separation. They detect incorporated nucleotides in real-time. Nanopore sequencing detects changes in electrical current as single-stranded DNA passes through a nanopore protein.
This document summarizes a seminar presentation on organic nano particles (ONPs) given by Mahdi Mirzaie. It discusses various types of ONPs, methods for their synthesis including mechanical grinding, laser ablation, and chemical methods. It also covers characterization techniques like NMR and properties of ONPs like size-dependent luminescence. Applications discussed include use in drugs, food, sensors and organic light emitting diodes. In conclusion, challenges are noted in stabilizing ONPs and improving synthesis efficiency and costs, as currently grinding is the main manufacturing method.
RNA plays an important role in protein synthesis. It has a primary sequence made of A, C, G, and U nucleotides that can fold into a secondary structure through base pairing. The secondary structure is predicted using either maximizing the number of base pairs or minimizing the free energy. Dynamic programming is commonly used to predict the optimal secondary structure. Predicting RNA structure is important for understanding its function and evolution.
The Galaxy bioinformatics workflow environmentRutger Vos
The document provides an overview of Galaxy, a bioinformatics workflow environment. Galaxy allows users to analyze genomic and other biological data through an easy-to-use web interface without requiring programming skills. It tracks the provenance of analyses and allows workflows to be run, shared, and reproduced. Galaxy supports common data types and file formats, runs tools through job queuing, and stores metadata in a database. The community is involved through mailing lists, tutorials, and events.
The MEGA software is one of the most widely used software tools in molecular taxonomy and bioinformatics. This module describes how MEGA can be employed in a classroom setting to teach the fundamentals of molecular taxonomy.
The essential mission of SRGE toward the research and education in Egypt is to foster learning and promoting research integrity in the current and next generation of researchers in Egypt. SRGE is rededicating itself to this fundamental purpose.
How to write a Scientific Manuscript – Pubrica.pptxPubrica
Writing a scientific manuscript is difficult for even the brightest minds, but it is highly satisfying once the project is completed. Researchers meticulously create manuscripts to share their original ideas and fresh discoveries with the scientific community and the general public.
Learn More : https://bit.ly/3ioFNT1
Reference: https://pubrica.com/
Why Pubrica:
When you order our services, we promise you the following – Plagiarism free | always on Time | 24*7 customer support | Written to international Standard | Unlimited Revisions support | Medical writing Expert | Publication Support | Bio statistical experts | High-quality Subject Matter Experts.
Contact us:
Web: https://pubrica.com/
Blog: https://pubrica.com/academy/
Email: sales@pubrica.com
WhatsApp : +91 9884350006
United Kingdom: +44-1618186353
This document provides information about DNA sequencing methods. It discusses that DNA sequencing determines the precise order of nucleotides in DNA. The two main conventional methods described are the Maxam-Gilbert chemical degradation method and the Sanger chain termination method. The Maxam-Gilbert method uses chemical modification and cleavage of DNA bases. The Sanger method is a PCR-based method that uses dideoxynucleotides to terminate DNA chain elongation. Both methods produce fragmented DNA of different lengths that can be resolved on a gel for sequence determination.
The Gene Ontology (GO) provides a controlled vocabulary for describing gene and gene product attributes across species. It consists of three ontologies covering biological processes, molecular functions, and cellular components. GO terms are organized into a directed acyclic graph structure and can have relationships like "is_a" and "part_of". Genes are annotated with GO terms to capture functional information, which is shared across species to facilitate research. While useful, the GO has some limitations like unclear reasoning principles and lack of validation procedures.
This document provides guidance on publishing academic papers. It discusses why publishing is important, what types of papers one can write, where to target publications, when researchers are ready to publish, who should be authors on a paper, and how to go through the publication process. The key steps outlined are identifying a publication opportunity, framing the paper and its contribution, writing drafts, getting feedback, handling revisions, and submitting the paper before a deadline. Conferences are suggested as a good starting point for getting feedback, while journals have higher standards but provide more lasting recognition. Supervisors can provide guidance on positioning work and navigating the publication process.
Presentation emerald linking research to the benefit of the communityraboudi amina
This document provides guidance on preparing manuscripts for international journals. It discusses key aspects such as choosing the right journal, following the journal's author guidelines, and structuring the manuscript properly. The ideal manuscript length is 25-30 pages and should follow a standard structure of title, abstract, introduction, methods, results, discussion, and conclusions sections. It is important to choose the correct journal type and scope that matches your research, and only submit your manuscript to one journal. The document offers tips for writing clearly and concisely while emphasizing the main points of your research for reviewers.
linking research to the benefit of the communityraboudi amina
This document provides guidance on preparing manuscripts for international journals. It discusses key aspects such as choosing the right journal, following the journal's author guidelines, and structuring the manuscript properly. The ideal manuscript length is 25-30 pages and should follow a standard structure of title, abstract, introduction, methods, results, discussion, and conclusions sections. It is important to choose the correct journal type for the manuscript and to only submit to one journal. The role of editors, publishers and peer reviewers in the publication process is also outlined. Overall, the document provides practical tips for writing clear and well-organized manuscripts that will appeal to journal editors.
The document provides information on business writing skills such as email writing, report writing, writing agendas, and meeting minutes. It discusses the structure of emails, including addressing, subject lines, attachments, and signatures. It offers tips for email tone and etiquette. Report writing sections cover objectives, types of reports, and steps for writing reports. The agenda section describes objectives and components of an effective agenda. Finally, the meeting minutes section defines minutes, typical content and order, and types of minutes.
getting your work published 291107______.pptemailwakmah
This document provides information on the journal publishing process, including deciding whether and where to publish research, understanding impact factors, what editors look for in manuscripts, writing the paper, responding to referee reports, and tips for success. The key steps are selecting an appropriate journal, writing a clear and compelling paper, undergoing peer review, responding thoroughly to referee feedback, and revising as needed until the paper is accepted for publication. The overall goal is to contribute new knowledge through high-quality research that will interest readers and be cited.
This document provides insights from an accounting journal editor on what editors look for when pre-screening manuscripts before sending them out for peer review. The editor discusses several key factors editors consider such as whether the references are up-to-date, if the writing is clear and consistent with journal guidelines, if the topic fits the journal scope, and if the work is novel and contributes to the existing literature. The editor provides recommendations for authors such as positioning their work within current literature, finding an appropriate journal scope, and getting feedback from colleagues before submitting.
This document provides an overview of the academic publishing process. It discusses conducting publishable research, writing papers, choosing journals, adhering to guidelines, preparing submissions, managing peer review, handling revisions, acceptance and rejection. Key steps include refining research questions, conducting thorough literature reviews, using appropriate methodologies, writing for the intended journal, addressing reviewer feedback, and considering alternative journals for rejected papers. The roles and responsibilities of authors and publishers are also outlined.
Learn more about peer review from the perspectives of an Editor-in-Chief, Online Publishing Systems Administrator, Associate Editor, Associate Editor Mentee and a Reviewer.
The document provides an overview of publishing in academic journals presented by Professor Simon Haslett. It discusses the academic writing process, making your name known, choosing the right journal, preparing manuscripts, dealing with rejection, and responding to reviewer comments. The goal is to guide researchers through getting published, including tips on collaboration, networking, choosing suitable journals, writing for specific publications, and overcoming rejection.
Workshop -- How to successfully write a scientific paper?KnihovnaUTB
Přednášející: Katarzyna Gaca-Zając, PhD Eng. | Elsevier
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Během školení se jeho účastníci naučí úspěšně napsat kvalitní vědecký článek, který bude korespondovat s vědeckou komunitou a umožní jeho autorům získat uznání. Představeny budou osvědčené postupy, které jsou založeny na zkušenostech výzkumných pracovníků, redaktorů a čtenářů. Školení je určeno především začínajícím výzkumným pracovníkům, vítáni jsou ale všichni vědečtí pracovníci a akademici.
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During this training the attendees will learn how to successfully write a good quality research paper, which will resonate well with the scientific community and will allow them to gain recognition. A summary of the best practices in writing will be presented and these are based on experience of researchers, editors and readers. The training is addressed primarily to young researchers, although senior academics are also welcome to attend.
This document provides guidance on finalizing a manuscript submission. It discusses double checking formatting requirements, verifying references, signing a copyright transfer form, obtaining permissions, submitting online, the peer review process, possible editorial decisions, responding to reviewer comments, and post-acceptance tasks. The goal is to ensure the manuscript meets journal standards and is submitted correctly the first time.
The presentation provided guidance on all aspects of writing and publishing scientific manuscripts, including choosing an appropriate journal, defining authorship, writing each section of a paper, the submission and peer review process, and ethical guidelines. Key tips included selecting a journal that matches the scope and significance of the research, defining author contributions early, and treating peer reviewers and editors with courtesy.
This document provides guidance on writing an abstract for submission and presentation. It discusses the importance of writing, reasons for not writing well, and objectives of the document. It defines what an abstract is and covers identifying your topic, doing background research, and following the four C's of abstract writing. Formats for clinical vignette, case report, and research abstracts are described. Tips are provided on finalizing, submitting, and presenting posters. Common reasons for abstract rejection and ways to improve are also discussed.
This document provides an overview of publishing with Emerald Group Publishing. It discusses Emerald's history and portfolio of journals, databases, and books. It then offers tips for authors on selecting target journals, following author guidelines, and revising papers in response to editor and reviewer feedback. The document aims to demystify the publishing process and encourage authors to not only publish but also take on roles like reviewing, editing, and more.
This seminar presentation aimed to help academics overcome barriers to publishing their research. It explored motivations for publishing, approaches to writing for publication, and submitting work to publishers. The presenter, who has extensive publishing experience, provided tips on choosing the right journal, preparing manuscripts, common reasons for rejection, and responding to editor and reviewer feedback. The presentation encouraged participants to develop plans and timelines for their own publishing goals.
The document provides guidance on corresponding with journals and responding to reviewers during the publication process. It discusses the roles and responsibilities of the corresponding author, how to write an effective cover letter, the peer review process, and how to revise a manuscript and respond to reviewer comments. The key responsibilities of the corresponding author include taking responsibility for communication with the journal and ensuring all authors approve the final manuscript version. An effective cover letter highlights the research significance and interest to the target journal's readers. When revising in response to reviews, authors should address all comments, make necessary changes to the manuscript, and provide polite, evidence-based responses to the journal.
Getting Published! Exploring strategies, myths and barriers of academic publi...Prof Simon Haslett
Publications are an important aspect of the work of an academic; remaining the principal vehicle through which research is reported, opinions aired, reviews undertaken, and knowledge transferred, and writing is also a useful learning exercise. For many, it also underpins teaching and curricula, means greater success in research grant applications, and a good publication track record is still seen by many institutions as a key recruitment and promotion criteria. Yet traditionally how to get your work published has not been taught, but learnt through trial and error, mainly from rejection by journal editors. This seminar is aimed at inexperienced academic authors and explores and discusses the issues surrounding the strategy and publication of academic work, and addresses some of the myths and barriers that might discourage would-be authors after the research and writing process is complete.
A presentation by Professor Simon Haslett (University of Wales) at the International University of Malaya-Wales (IUMW) on Wednesday 19th February 2014.
This document provides guidance on writing abstracts for submission and poster presentations. It discusses the importance of writing and overcoming reasons for not writing. The objectives are to learn about publications, writing abstracts, submission processes, and tips. Key points include identifying your topic, conducting background research, following a four C's structure of complete, concise, clear and cohesive. Formats for clinical vignettes and research abstracts are outlined. Editing, reviewing, and meeting submission requirements are emphasized prior to submitting an abstract.
This document provides guidance on writing abstracts for submission and poster presentations. It discusses the importance of writing and overcoming reasons for not writing. The objectives are to learn about publications, writing abstracts, submission processes, and tips. Key points include identifying your topic, conducting background research, following a four C's structure of complete, concise, clear and cohesive. Formats for clinical vignettes and research abstracts are outlined. Editing, reviewing, and meeting submission requirements are emphasized prior to submitting an abstract.
An Open Access Solution that is Genuinely and Globally OpenTown Peterson
This document discusses open access to scholarly literature. It defines open access as digital content that is free of charge and most copyright/licensing restrictions. While open access literature is not free to produce, the goal is to make it costless to access. The document outlines various open access models including green (self-archiving), gold (fully open access journals), hybrid (option to pay a fee to make individual articles open), and platinum (no fees for readers or authors, requiring subsidy). It argues that open access is necessary to foster a global scholarly community but that not all solutions are equal, and that platinum open access which removes all barriers ultimately requires sustainable subsidy.
The document discusses concepts and methodology in ecological niche modeling and species distribution modeling. It addresses issues like spatial autocorrelation, study design, and scenarios in the background area of modeling (BAM). It presents methods for calibrating models, evaluating models and comparing different modeling algorithms. Maps of distributions of disease vectors in Brazil are shown and factors influencing distributions are examined.
Niche comparisons 201606 para curso LichosTown Peterson
This document discusses different methods for comparing species niches, including comparing niches in geographic space versus environmental space. It outlines the requirements for niche comparisons, such as defining the null hypothesis and measuring observed versus expected similarities. Two main approaches are described: Warren et al.'s method of comparing niches in geographic space using background similarity tests, and Broennimann et al.'s method of comparing niches in environmental space using kernel densities and randomization tests. The document also provides examples of applications of niche comparison methods including studies on squirrels and fire ants.
This document discusses different methods for evaluating species distribution models. It compares threshold-dependent versus threshold-independent approaches. Threshold-dependent approaches like the binomial test assess whether a model's predictions are significantly better than random by using a single threshold. Threshold-independent approaches like ROC curves avoid assumptions around thresholding but have other limitations. The document emphasizes that both significance testing and measures of predictive performance are important for properly evaluating a model.
Curso Lichos - MOP and (separately) Niche conservatism 201606Town Peterson
MODEL TRANSFERS AND MOP
- MESS and MOP are methods for detecting extrapolative situations in species distribution models. MESS compares areas to the centroid of calibration data, while MOP compares to the nearest calibration data.
- MOP better characterizes similarities between calibration and transfer regions, making it more optimistic about in-range extrapolation.
- The document discusses evaluating niche conservatism across different timescales, from short-term invasions to differences between deeply diverged lineages, and how niche modeling approaches need to account for temporal dimensions.
- Issues with detecting niche evolution are discussed, such as distinguishing the fundamental niche from existing niche subsets and overestimating niche evolution due to incomplete characterization of nic
The document discusses best practices for estimating ecological niches and producing species distribution models. It recommends using multiple modeling approaches rather than a single "best" algorithm, and fitting simple, convex models of the fundamental niche rather than complex models of the realized niche which risk overfitting. The document also discusses incorporating factors like dispersal limitations, land use change, and human effects that can't be included directly in niche models.
The document discusses biodiversity informatics training and resources. It notes that biodiversity informatics is a new field without established training programs or textbooks. It proposes the Biodiversity Informatics Training Curriculum (BITC) to address this need. BITC would include in-person training courses along with online videos, subtitles, and translations to make the materials broadly accessible. It outlines the curriculum topics and plans for future expansion, including additional modules, languages, and regions. It also provides suggestions for a Taiwanese biodiversity informatics program, including translating BITC, developing a national biodiversity assessment, capturing older data from overseas collections, and building training opportunities.
This document discusses mapping disease transmission risk from ecological and biogeographic perspectives. It summarizes past work mapping the distributions of diseases like Marburg and Lassa fever in Africa. It outlines a workflow for developing models of disease transmission risk that integrate niche models of relevant host, vector, and pathogen species with human and climate data. Challenges include integrating disease data with environmental data, accounting for species interactions, and evaluating models under future climate scenarios. Addressing these challenges could help create more predictive spatial epidemiology models.
This document discusses using niche modeling techniques to project the potential distributions of invasive species. It notes that such projections require comprehensive data from the species' native range and any other invaded areas to characterize the environmental conditions where the species is known to occur. Where possible, data from the target invaded range should also be used to test the model projections. The document recommends exploring different algorithms, environmental data sets, and extrapolation techniques to develop robust projections of areas at risk of invasion.
D2T3 exploring past distributions of speciesTown Peterson
This document discusses how Pleistocene climate changes may have impacted forest bird speciation patterns globally. It presents evidence that:
1) Forest bird distributions were fragmented into refugia during glacial periods, driving speciation as suggested by Haffer. Molecular and distribution data from Amazonian birds support this.
2) Different regions experienced warming or cooling phases that isolated populations, with adjacent areas sometimes experiencing opposite phases.
3) Speciation timing may have been out of phase between regions. Molecular clocks estimating pre-Pleistocene speciation may be inaccurate. Understanding species' ecological requirements and range shifts over time provides new insights.
D2T2 predicting species range under climate changeTown Peterson
The document discusses several potential drivers of biodiversity change including climate change, land use change, sea level rise, and direct exploitation. It explores approaches to studying both present-day models and future projections of driver impacts, as well as documenting changes that have already occurred. Specific methods examined include projecting future climate conditions, adding effects of land use and sea level rise changes, and measuring avifaunal turnover in recent historical times. The results indicate that observed temperature changes have had a significant effect on species turnover while human landscape impacts and precipitation changes have not. Land use change, climate change, and sea level rise are highlighted as diverse drivers of biodiversity change, with their impacts being complex to study and dependent on available before-and-after
A study examined the distribution of Spanish moss, an epiphytic bromeliad, across its range and related its distribution to climate data to test if its distribution could be anticipated based on optimal physiological conditions. Detailed physiological studies of Spanish moss from the 1970s-1980s were used alongside a climate data set providing global climate information every 6 hours for decades. The study aimed to scale from the micro level of Spanish moss physiology to the macro level of climate and geography to model its potential distribution using climate variables alone and with dispersal factors added.
This document discusses methods for ecological niche modeling (ENM). It covers the major steps in the ENM process:
1) Accumulating occurrence and environmental data
2) Integrating the data and assessing scenarios of how available habitat relates to a species' distribution
3) Calibrating models using various algorithms and evaluating model performance
The document emphasizes best practices such as considering biases in occurrence data, reducing dimensionality, assessing spatial autocorrelation, and using multiple model algorithms and evaluation metrics to identify the best model for a given situation. Thresholding is discussed as a key step to convert model outputs to predicted distributions.
Ecological niche modeling uses species occurrence data and environmental data to build a model predicting a species' probability of presence in a given area. However, the process is more complicated than simply combining the two data sources. It involves carefully preparing and quality checking the data, choosing an appropriate area and method for model calibration, evaluating the model, and assessing whether the model can be extrapolated to other times or places. Many steps are required to produce an accurate ecological niche model.
D1T1 overview of the theoretical foundations for ecological niche modelsTown Peterson
The document discusses the BAM (Biotic, Abiotic, Movement) diagram, which is a heuristic for conceptualizing species' ecological niches and geographic distributions. It describes the three components of the BAM diagram - the abiotic niche defined by physiological requirements, the biotic niche defined by biotic interactions, and accessibility defined by a species' ability to disperse. The document also discusses Hutchinson's distinction between scenopoetic and bionomic variables and provides examples demonstrating the importance of dispersal limitations on species' distributions.
Early History of Ecological Niche Modeling and Species Distribution ModelingTown Peterson
Ecological niche modeling (ENM) and species distribution modeling (SDM) emerged in the early 1900s from Grinnell's concept of the ecological niche and has grown tremendously, with key early developments including models from Australia, Mexico, CLIMEX, and GAP analyses. Major algorithms improved upon BIOCLIM and included GARP and statistical approaches, and the field solidified with broad model testing by Elith et al. in 2006 and Phillips et al.'s influential 2006 paper launching maximum entropy modeling.
José Mariano Mociño: A First Light in Mexican OrnithologyTown Peterson
A talk presented to the Facultad de Ciencias, UNAM, in Mexico City. Accompanied the presentation of a new book publication on the ornithological results of the Sessé-Mociño expeditions in the late 1700s.
José Mariano Mociño: A First Light in Mexican OrnithologyTown Peterson
Talk presented (in Spanish) to the Facultad de Ciencias, UNAM, in celebration of the publication of a book presenting the 'ornithology' of the Sessé-Mociño Expedition in the late 1700s.
Discovery of An Apparent Red, High-Velocity Type Ia Supernova at 𝐳 = 2.9 wi...Sérgio Sacani
We present the JWST discovery of SN 2023adsy, a transient object located in a host galaxy JADES-GS
+
53.13485
−
27.82088
with a host spectroscopic redshift of
2.903
±
0.007
. The transient was identified in deep James Webb Space Telescope (JWST)/NIRCam imaging from the JWST Advanced Deep Extragalactic Survey (JADES) program. Photometric and spectroscopic followup with NIRCam and NIRSpec, respectively, confirm the redshift and yield UV-NIR light-curve, NIR color, and spectroscopic information all consistent with a Type Ia classification. Despite its classification as a likely SN Ia, SN 2023adsy is both fairly red (
�
(
�
−
�
)
∼
0.9
) despite a host galaxy with low-extinction and has a high Ca II velocity (
19
,
000
±
2
,
000
km/s) compared to the general population of SNe Ia. While these characteristics are consistent with some Ca-rich SNe Ia, particularly SN 2016hnk, SN 2023adsy is intrinsically brighter than the low-
�
Ca-rich population. Although such an object is too red for any low-
�
cosmological sample, we apply a fiducial standardization approach to SN 2023adsy and find that the SN 2023adsy luminosity distance measurement is in excellent agreement (
≲
1
�
) with
Λ
CDM. Therefore unlike low-
�
Ca-rich SNe Ia, SN 2023adsy is standardizable and gives no indication that SN Ia standardized luminosities change significantly with redshift. A larger sample of distant SNe Ia is required to determine if SN Ia population characteristics at high-
�
truly diverge from their low-
�
counterparts, and to confirm that standardized luminosities nevertheless remain constant with redshift.
PPT on Alternate Wetting and Drying presented at the three-day 'Training and Validation Workshop on Modules of Climate Smart Agriculture (CSA) Technologies in South Asia' workshop on April 22, 2024.
The binding of cosmological structures by massless topological defectsSérgio Sacani
Assuming spherical symmetry and weak field, it is shown that if one solves the Poisson equation or the Einstein field
equations sourced by a topological defect, i.e. a singularity of a very specific form, the result is a localized gravitational
field capable of driving flat rotation (i.e. Keplerian circular orbits at a constant speed for all radii) of test masses on a thin
spherical shell without any underlying mass. Moreover, a large-scale structure which exploits this solution by assembling
concentrically a number of such topological defects can establish a flat stellar or galactic rotation curve, and can also deflect
light in the same manner as an equipotential (isothermal) sphere. Thus, the need for dark matter or modified gravity theory is
mitigated, at least in part.
Immersive Learning That Works: Research Grounding and Paths ForwardLeonel Morgado
We will metaverse into the essence of immersive learning, into its three dimensions and conceptual models. This approach encompasses elements from teaching methodologies to social involvement, through organizational concerns and technologies. Challenging the perception of learning as knowledge transfer, we introduce a 'Uses, Practices & Strategies' model operationalized by the 'Immersive Learning Brain' and ‘Immersion Cube’ frameworks. This approach offers a comprehensive guide through the intricacies of immersive educational experiences and spotlighting research frontiers, along the immersion dimensions of system, narrative, and agency. Our discourse extends to stakeholders beyond the academic sphere, addressing the interests of technologists, instructional designers, and policymakers. We span various contexts, from formal education to organizational transformation to the new horizon of an AI-pervasive society. This keynote aims to unite the iLRN community in a collaborative journey towards a future where immersive learning research and practice coalesce, paving the way for innovative educational research and practice landscapes.
EWOCS-I: The catalog of X-ray sources in Westerlund 1 from the Extended Weste...Sérgio Sacani
Context. With a mass exceeding several 104 M⊙ and a rich and dense population of massive stars, supermassive young star clusters
represent the most massive star-forming environment that is dominated by the feedback from massive stars and gravitational interactions
among stars.
Aims. In this paper we present the Extended Westerlund 1 and 2 Open Clusters Survey (EWOCS) project, which aims to investigate
the influence of the starburst environment on the formation of stars and planets, and on the evolution of both low and high mass stars.
The primary targets of this project are Westerlund 1 and 2, the closest supermassive star clusters to the Sun.
Methods. The project is based primarily on recent observations conducted with the Chandra and JWST observatories. Specifically,
the Chandra survey of Westerlund 1 consists of 36 new ACIS-I observations, nearly co-pointed, for a total exposure time of 1 Msec.
Additionally, we included 8 archival Chandra/ACIS-S observations. This paper presents the resulting catalog of X-ray sources within
and around Westerlund 1. Sources were detected by combining various existing methods, and photon extraction and source validation
were carried out using the ACIS-Extract software.
Results. The EWOCS X-ray catalog comprises 5963 validated sources out of the 9420 initially provided to ACIS-Extract, reaching a
photon flux threshold of approximately 2 × 10−8 photons cm−2
s
−1
. The X-ray sources exhibit a highly concentrated spatial distribution,
with 1075 sources located within the central 1 arcmin. We have successfully detected X-ray emissions from 126 out of the 166 known
massive stars of the cluster, and we have collected over 71 000 photons from the magnetar CXO J164710.20-455217.
When I was asked to give a companion lecture in support of ‘The Philosophy of Science’ (https://shorturl.at/4pUXz) I decided not to walk through the detail of the many methodologies in order of use. Instead, I chose to employ a long standing, and ongoing, scientific development as an exemplar. And so, I chose the ever evolving story of Thermodynamics as a scientific investigation at its best.
Conducted over a period of >200 years, Thermodynamics R&D, and application, benefitted from the highest levels of professionalism, collaboration, and technical thoroughness. New layers of application, methodology, and practice were made possible by the progressive advance of technology. In turn, this has seen measurement and modelling accuracy continually improved at a micro and macro level.
Perhaps most importantly, Thermodynamics rapidly became a primary tool in the advance of applied science/engineering/technology, spanning micro-tech, to aerospace and cosmology. I can think of no better a story to illustrate the breadth of scientific methodologies and applications at their best.
Travis Hills of MN is Making Clean Water Accessible to All Through High Flux ...Travis Hills MN
By harnessing the power of High Flux Vacuum Membrane Distillation, Travis Hills from MN envisions a future where clean and safe drinking water is accessible to all, regardless of geographical location or economic status.
The cost of acquiring information by natural selectionCarl Bergstrom
This is a short talk that I gave at the Banff International Research Station workshop on Modeling and Theory in Population Biology. The idea is to try to understand how the burden of natural selection relates to the amount of information that selection puts into the genome.
It's based on the first part of this research paper:
The cost of information acquisition by natural selection
Ryan Seamus McGee, Olivia Kosterlitz, Artem Kaznatcheev, Benjamin Kerr, Carl T. Bergstrom
bioRxiv 2022.07.02.498577; doi: https://doi.org/10.1101/2022.07.02.498577
PPT on Direct Seeded Rice presented at the three-day 'Training and Validation Workshop on Modules of Climate Smart Agriculture (CSA) Technologies in South Asia' workshop on April 22, 2024.
The debris of the ‘last major merger’ is dynamically youngSérgio Sacani
The Milky Way’s (MW) inner stellar halo contains an [Fe/H]-rich component with highly eccentric orbits, often referred to as the
‘last major merger.’ Hypotheses for the origin of this component include Gaia-Sausage/Enceladus (GSE), where the progenitor
collided with the MW proto-disc 8–11 Gyr ago, and the Virgo Radial Merger (VRM), where the progenitor collided with the
MW disc within the last 3 Gyr. These two scenarios make different predictions about observable structure in local phase space,
because the morphology of debris depends on how long it has had to phase mix. The recently identified phase-space folds in Gaia
DR3 have positive caustic velocities, making them fundamentally different than the phase-mixed chevrons found in simulations
at late times. Roughly 20 per cent of the stars in the prograde local stellar halo are associated with the observed caustics. Based
on a simple phase-mixing model, the observed number of caustics are consistent with a merger that occurred 1–2 Gyr ago.
We also compare the observed phase-space distribution to FIRE-2 Latte simulations of GSE-like mergers, using a quantitative
measurement of phase mixing (2D causticality). The observed local phase-space distribution best matches the simulated data
1–2 Gyr after collision, and certainly not later than 3 Gyr. This is further evidence that the progenitor of the ‘last major merger’
did not collide with the MW proto-disc at early times, as is thought for the GSE, but instead collided with the MW disc within
the last few Gyr, consistent with the body of work surrounding the VRM.
(June 12, 2024) Webinar: Development of PET theranostics targeting the molecu...Scintica Instrumentation
Targeting Hsp90 and its pathogen Orthologs with Tethered Inhibitors as a Diagnostic and Therapeutic Strategy for cancer and infectious diseases with Dr. Timothy Haystead.
2. Overall Publishing Process
• Write the paper
• Edit/proof the manuscript
• Format for the journal
• Submit to the journal
• Editor decides iniAally and sends out to review
• Reviewers provide suggesAons and criAcisms
• Editor decides whether to accept
– … can repeat several Ames
• Author revises
• Final acceptance
• Proofs sent to author
• Author corrects
• Author signs copyright transfer agreement
• PublicaAon
4. Scoping the Paper
Short and Sweet
• Advantages
– Easy to write
– Simple message
– “More” publicaAons on your
CV
• Disadvantages
– Dilutes the message
– Reader has to search for the
whole story across many
papers
– Less impact per publicaAon
Long and Complete
• Advantages
– Whole story is there in one
place
– Greater potenAal impact
• Disadvantages
– More difficult to organize and
write
– Message can get complex
– Fewer publicaAons on your
CV
7. WriAng – Structure and Order
• Suggested order of wriAng:
– Figures / Tables
– Methods / Results
– IntroducAon / Discussion
– Abstract
• Last paragraph of IntroducAon should begin “This
paper …” and should state clearly the purpose of
the paper
• Length – care not to be overly long in
IntroducAon and Discussion
• RepeAAon – no need to repeat parts of
IntroducAon in Discussion, or parts of Results in
Discussion
45. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
46. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
47. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
48. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
49. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
50. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
51. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
52. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
53. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
54. • BIRDLIFE INTERNATIONAL. 2012. IUCN Red List for birds. Downloaded from hUp://www.birdlife.org on
03/07/2012.
• BROWN, R. M., AND A.C. DIESMOS. 2002. ApplicaAon of lineage-based species concept to oceanic island frog
populaAons: The effects of differing taxonomic philosophies on the esAmaAon of Philippine biodiversity.
Silliman Journal 42, 133–162.
• CLEMENT, M., POSADA, D., AND K.A. CRANDALL. 2000. TCS: a computer program to esAmate gene genealogies.
Molecular Ecology 9:1657–1659.
• COLLAR, N.J. 2006. A parAal revision of the Asian babblers, Timaliidae. Forktail 22:85–112.
• COLLAR, N. J. AND C. ROBSON. 2007. Family Timaliidae (babblers). 70–291. In Handbook of the birds of the
world. Volume 12. Picathartes to 4ts and chickadees. Del Hoyo, J., A. EllioU, and D. A. ChrisAe. Editors. Lynx
Edicions. Barcelona, Spain.
• COYNE, J.A. AND T.D. PRICE. 2000. LiUle evidence for sympatric speciaAon in island birds. Evolu4on, 54, 2166–
2171.
• DE ROEVER, J. 1990. Notes on the Luzon Wren-Babbler. Bull. Oriental Bird Club 12:33-–34.
• DIAMOND, J.M. 1977. ConAnental and insular speciaAon in Pacific landbirds. Systema4c Zoology, 26, 263–
268.
• DUPONT, J.E. 1971. Notes on Philippine birds (No. 1). Nemouria 3.
• DUPONT, J.E. 1971. Philippine birds. Delaware Museum of Natural History Monographs Series 2.
• HEANEY, L. R., 1986. Biogeography of mammals in SE Asia: esAmates of rates of colonizaAon, exAncAon and
speciaAon. Biological Journal of the Linnean Society 28: 127–165.
• HIJMANS, R.J., CAMERON, S.E., PARRA, J.L., JONES, P.G., AND A. JARVIS. 2005. Very high resoluAon interpolated
climate surfaces for global land areas. InternaAonal Journal of Climatology 25:1965–1978.
• IUCN STANDARDS AND PETITIONS SUBCOMMITTEE. 2010. Guidelines for Using the IUCN Red List Categories and
Criteria. Version 8.1. Prepared by the Standards and PeAAons SubcommiUee in March 2010. Downloadable
from hUp://intranet.iucn.org/webfiles/doc/SSC/RedList/RedListGuidelines.pdf
• LAMBERT, F.L. 1993. Some key sights and significant records of bird from the Philippines and Sabah. Bird
ConservaAon InternaAonal 3:281–297.
• GONZÁLEZ, L.A.S., OLIVEROS, C., PUNA, N. AND R.G. MOYLE. 2010. Nests, Nest Placement, and Eggs of Three
Philippine Endemic Birds. Wilson Journal of Ornithology 122:587–591.
• GOODMAN, S. M. AND P. C. GONZALES. 1990. The birds of Mt Isarog NaAonal Park, southern Luzon, Philippines,
with parAcular reference to alAtudinal distribuAon. Fieldiana Zoology 60:1–39.
94. How Big is the Access Problem?
An Experiment for EEB Scholarship
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assemblages from the central TransantarcAc Mountains, AntarcAca, Review of Palaeobotany and Palynology,
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• Claire Horner-Devine, M., Leibold, M. A., Smith, V. H., Bohannan, B. J. M. 2003. Bacterial diversity paUerns
along a gradient of primary producAvity. Ecology LeUers 6:613-622.
• Rafe M. Brown, Jimmy A. McGuire and Arvin C. Diesmos. 2000. Status of some Philippine frogs referred to
Rana evereY (Anura: Ranidae), descripAon of a new species, and resurrecAon of Rana igorota Taylor 1922.
Herpetologica 56:81-104.
• Billings, S. A. 2008. Biogeochemistry: Nitrous oxide in flux. Nature 456:888-889.
• Harald Schneider, Alan R. Smith, Raymond Cranfill, Terri J. Hildebrand, Christopher H. Haufler, Tom A. Ranker.
2004. Unraveling the phylogeny of polygrammoid ferns (Polypodiaceae and GrammiAdaceae): exploring
aspects of the diversificaAon of epiphyAc plants. Molecular PhylogeneAcs and EvoluAon 31:1041-1063.
• Neal Woodman, Robert M. Timm, Norman A. Slade and Terry J. Doonan. 1996. Comparison of traps and baits
for censusing small mammals in Neotropical lowlands. Journal of Mammalogy 77:274-281.
• Leonard Krishtalka and Philip S. Humphrey. 2000. Can natural history museums capture the future? BioScience
50:611–617.
• Bryan L. Foster, Timothy L. Dickson. 2004. Grassland diversity and producAvity: The interplay of resource
availability and propagule pools. Ecology 85:1541-1547.
• Paul O. Lewis, Mark T. Holder, and Kent E. Holsinger. 2005. Polytomies and Bayesian phylogeneAc inference.
SystemaAc Biology 54:241-253.
• Lena C. Hileman, Jens F. Sundstrom, Amy LiU, Meiqin Chen, Takudzwa Shumba, and Vivian F. Irish. 2006.
Molecular and phylogeneAc analyses of the MADS-box gene family in tomato. Molecular Biology and EvoluAon
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116. Overall Publishing Process
• Write the paper
• Edit/proof the manuscript
• Format for the journal
• Submit to the journal
• Editor decides iniAally and sends out to review
• Reviewers provide suggesAons and criAcisms
• Editor decides whether to accept
– … can repeat several Ames
• Author revises
• Final acceptance
• Proofs sent to author
• Author corrects
• Author signs copyright transfer agreement
• PublicaAon