1-15-16 Agenda & Objective
Paper Plasmid Lab
ObjectiveObjective
Create a model of a recombinant plasmid and use it
to explain how they are made and why they are
useful
Preparation
Cut out the Cell DNA
(goldenrod). These
must be glued together
in the order indicated at
the bottom.
Keep this DNA in one
long sheet.
Preparation
1. Cut out the bacterial DNA
strips – pink paper
2. Toss out any 2 strips, except
for the one with the replication
site
3. Glue your strips together in
any order, end-to-end.
4. Form a ring with them and tape
the ring together.
Does everyoneDoes everyone
have the samehave the same
ring of bacteriaring of bacteria
DNA?DNA?
Okay…here is what we are
going to do:
1. We are going to cut out the gene (DNA)
for insulininsulin from some human DNA
2. We are going to cut open the DNA from a
bacteria
3. We are going to fuse the 2 together
4. Then the bacteria will be able to make
human insulin
What gene areWhat gene are
we going to cutwe going to cut
out of theout of the
human DNA?human DNA?
Where areWhere are
we going towe going to
put thisput this
humanhuman
gene?gene?
WHY?WHY?
How we will do it
• We need to find the 11
restriction enzymerestriction enzyme that
can cut BOTH DNAs for
us
 Cuts the human DNA 2
times
 Cuts the bacteria DNA 1
time
• Then the DNA pieces will
have the same sticky ends
and will match up to each
other
Human DNA
Bacteria DNA
Bacteria DNA
How manyHow many
enzymes willenzymes will
we end upwe end up
using to cutusing to cut
the DNA?the DNA?
How it’s done
• Cut the DNA from both
organisms with the SAME
restriction enzyme
• So they have complimentary
overhanging “sticky ends”
• Combine the DNA with
DNA ligase - an enzyme that
will seal them together
Examples
A restriction enzyme may recognize the
sequence
And it cuts after the A on both strands.
What will the cut look like?
ACCGGT
TGGCCA
What we use it for
• Put insulin gene into yeast to make insulin
for diabetics
• Factor VIII into bacteria for hemophiliacs
• Human Growth Hormone
• Erythropoietin for treating anemia
Procedure
Run each enzyme slowly
up and down each DNA
It must cut your PINKPINK
plasmid only ONCEONCE
If must cut your
GOLDENRODGOLDENROD Human
DNA TWICETWICE – above
and below the gene of
interest.
How manyHow many
enzymes areenzymes are
we going towe going to
end upend up
using?using?
Procedure
Select the ONE enzyme that can
cut your bacteria DNA once
and your Cell DNA twice.
Record it’s name in your data
table.
Use scissors to cut the DNA of
the bacteria and the Cell as
this enzyme would, in a
staggered fashion.
Procedure
Use tape to “splice” the
goldenrod cell DNAgoldenrod cell DNA
genegene into your pinkpink
bacteria DNA.bacteria DNA.
You have now created
recorecombinmbinantant DDNNAA
Analysis Questions
1. In real life, not all bacteria will
successfully take up the cell DNA.
Scientists need a way to select only the
bacteria that have the gene. They do this
by putting antibiotics on the bacteria.
Those that survive must have the
antibiotic resistance gene, along with the
cell DNA.
What antibiotics are your bacteria resistant
to?
Procedure
On your bacterial (PLASMID) DNA (the pink
paper):
a. Do you have the gene for ampicillin
resistance?
b. Do you have the gene for kanamycin
resistance?
c. Do you have the gene for tetracyclin
resistance?
d. We ALL must have the replication site
Analysis Questions
Draw in the location of the
insulin gene

Paper plasmid lab

  • 1.
    1-15-16 Agenda &Objective Paper Plasmid Lab ObjectiveObjective Create a model of a recombinant plasmid and use it to explain how they are made and why they are useful
  • 3.
    Preparation Cut out theCell DNA (goldenrod). These must be glued together in the order indicated at the bottom. Keep this DNA in one long sheet.
  • 4.
    Preparation 1. Cut outthe bacterial DNA strips – pink paper 2. Toss out any 2 strips, except for the one with the replication site 3. Glue your strips together in any order, end-to-end. 4. Form a ring with them and tape the ring together. Does everyoneDoes everyone have the samehave the same ring of bacteriaring of bacteria DNA?DNA?
  • 5.
    Okay…here is whatwe are going to do: 1. We are going to cut out the gene (DNA) for insulininsulin from some human DNA 2. We are going to cut open the DNA from a bacteria 3. We are going to fuse the 2 together 4. Then the bacteria will be able to make human insulin What gene areWhat gene are we going to cutwe going to cut out of theout of the human DNA?human DNA? Where areWhere are we going towe going to put thisput this humanhuman gene?gene? WHY?WHY?
  • 6.
    How we willdo it • We need to find the 11 restriction enzymerestriction enzyme that can cut BOTH DNAs for us  Cuts the human DNA 2 times  Cuts the bacteria DNA 1 time • Then the DNA pieces will have the same sticky ends and will match up to each other Human DNA Bacteria DNA Bacteria DNA How manyHow many enzymes willenzymes will we end upwe end up using to cutusing to cut the DNA?the DNA?
  • 7.
    How it’s done •Cut the DNA from both organisms with the SAME restriction enzyme • So they have complimentary overhanging “sticky ends” • Combine the DNA with DNA ligase - an enzyme that will seal them together
  • 8.
    Examples A restriction enzymemay recognize the sequence And it cuts after the A on both strands. What will the cut look like? ACCGGT TGGCCA
  • 9.
    What we useit for • Put insulin gene into yeast to make insulin for diabetics • Factor VIII into bacteria for hemophiliacs • Human Growth Hormone • Erythropoietin for treating anemia
  • 10.
    Procedure Run each enzymeslowly up and down each DNA It must cut your PINKPINK plasmid only ONCEONCE If must cut your GOLDENRODGOLDENROD Human DNA TWICETWICE – above and below the gene of interest. How manyHow many enzymes areenzymes are we going towe going to end upend up using?using?
  • 11.
    Procedure Select the ONEenzyme that can cut your bacteria DNA once and your Cell DNA twice. Record it’s name in your data table. Use scissors to cut the DNA of the bacteria and the Cell as this enzyme would, in a staggered fashion.
  • 12.
    Procedure Use tape to“splice” the goldenrod cell DNAgoldenrod cell DNA genegene into your pinkpink bacteria DNA.bacteria DNA. You have now created recorecombinmbinantant DDNNAA
  • 14.
    Analysis Questions 1. Inreal life, not all bacteria will successfully take up the cell DNA. Scientists need a way to select only the bacteria that have the gene. They do this by putting antibiotics on the bacteria. Those that survive must have the antibiotic resistance gene, along with the cell DNA. What antibiotics are your bacteria resistant to?
  • 15.
    Procedure On your bacterial(PLASMID) DNA (the pink paper): a. Do you have the gene for ampicillin resistance? b. Do you have the gene for kanamycin resistance? c. Do you have the gene for tetracyclin resistance? d. We ALL must have the replication site
  • 16.
  • 17.
    Draw in thelocation of the insulin gene