Cancer arises from mutations in genes that control cell division, apoptosis, and DNA repair. There are three main classes of cancer genes: proto-oncogenes that become activated oncogenes, tumor suppressor genes that are inactivated, and mutator genes that increase mutation rates. The two-hit model explains that tumors often develop when both copies of a tumor suppressor gene acquire mutations. For example, the tumor suppressor gene RB is mutated in the inherited cancer retinoblastoma following the two-hit model. Cancer development can also be caused by viruses introducing oncogenes or through exposure to carcinogens and radiation inducing mutations.
Cancer is mainly caused by the conversion of proto-oncogenes into oncogenes. The process is known as oncogenesis.
This slide will help to get an idea about oncogenesis and also the proto-oncogenes which get converted.
It describes about Structure and function of telomere, Telomerase enzyme, How does telomerase works?, Telomere replication, What happens to telomeres as we age?, Factors contribute to telomere shortening
UNDERSTANDING OF CHEMICAL CARCINOGENESIS:CURRENT AND FUTURE PERSPECTIVES
Carcinogenesis refers to the process by which a normal cell is transformed into a malignant cell and repeatedly divides to become a cancer
Chemicals which initiate this process is called chemical carcinogens
Chemicals which increase the effectiveness of carcinogens is called co-carcinogens
CLASSIFICATION OF CHEMICAL CARCINOGENS
MECHANISM OF ACTION
STAGES OF CARCINOGENESIS
ROLE OF PROTO-ONCOGENES AND TUMOR SUPPRESSOR GENES
ACTIVATION OF PROTO ONCOGENES
INACTIVATION OF TUMOR SUPPRESSOR GENE
OXIDATIVE STRESS IN CARCINOGENESIS
ROS can be produced from both endogenous and exogenous sources
Attack both purine and pyrimidine bases, as well as the deoxyribose backbone
Induces DNA damage which includes single or double-strand breakage, deoxyribose modification, and DNA cross-link
If DNA damage is not properly repaired it may result in mutation which leads to cancer
BIOMARKERS
REGULATORY BACKGROUND
OECD guidelines
451- Carcinogenecity studies
453- Combined chronic toxicity/carcinogenecity
ICH guidelines
S1A- Guideline on the need for carcinogenicity studies of
pharmaceuticals
S1B- Testing for carcinogenicity of pharmaceuticals
S1C- Dose selection for carcinogenicity studies of pharmaceuticals
Cancer is mainly caused by the conversion of proto-oncogenes into oncogenes. The process is known as oncogenesis.
This slide will help to get an idea about oncogenesis and also the proto-oncogenes which get converted.
It describes about Structure and function of telomere, Telomerase enzyme, How does telomerase works?, Telomere replication, What happens to telomeres as we age?, Factors contribute to telomere shortening
UNDERSTANDING OF CHEMICAL CARCINOGENESIS:CURRENT AND FUTURE PERSPECTIVES
Carcinogenesis refers to the process by which a normal cell is transformed into a malignant cell and repeatedly divides to become a cancer
Chemicals which initiate this process is called chemical carcinogens
Chemicals which increase the effectiveness of carcinogens is called co-carcinogens
CLASSIFICATION OF CHEMICAL CARCINOGENS
MECHANISM OF ACTION
STAGES OF CARCINOGENESIS
ROLE OF PROTO-ONCOGENES AND TUMOR SUPPRESSOR GENES
ACTIVATION OF PROTO ONCOGENES
INACTIVATION OF TUMOR SUPPRESSOR GENE
OXIDATIVE STRESS IN CARCINOGENESIS
ROS can be produced from both endogenous and exogenous sources
Attack both purine and pyrimidine bases, as well as the deoxyribose backbone
Induces DNA damage which includes single or double-strand breakage, deoxyribose modification, and DNA cross-link
If DNA damage is not properly repaired it may result in mutation which leads to cancer
BIOMARKERS
REGULATORY BACKGROUND
OECD guidelines
451- Carcinogenecity studies
453- Combined chronic toxicity/carcinogenecity
ICH guidelines
S1A- Guideline on the need for carcinogenicity studies of
pharmaceuticals
S1B- Testing for carcinogenicity of pharmaceuticals
S1C- Dose selection for carcinogenicity studies of pharmaceuticals
Audio and slides for this presentation are available on YouTube: http://youtu.be/e_KVYJX2GTs
Have you ever wondered about your genetic predisposition to cancer? How cancer evolves in families? Or how cancer cells differ from normal cells in your body? Join Judy Garber, MD, MPH, director of the Center for Cancer Genetics and Prevention at Dana-Farber Cancer Institute, as she explores the basics of cancer genetics, DNA mutations, genetic screening, management, and more.
Cancer (Concept of oncogenes and tumor suppressor genes with special referenc...RubinSahu5
Cancer (Concept of oncogenes and tumor suppressor genes with special referencetop53, Retinoblastoma and Ras and APC)
Cancer is a non-infectious disease. It starts at the molecular level of the cell and, ultimately affects the cellular behavior.
It can be defined as uncontrolled proliferation of cells without any differentiation.
Cancer is a genetic disease because it can be traced to alterations within specific genes.
Most cancer cells experience a breakdown in all of these regulatory influences that protect the body from chaos and self‐destruction.
Cancer cells proliferate uncontrollably, producing Malignant tumors that invade surrounding healthy tissue.
Malignant tumors tend to metastasize, that is, to spawn renegade cells that break away from the parent mass, enter the lymphatic or vascular circulation, and spread to distant sites in the body where they establish lethal secondary tumors that are no longer amenable to surgical removal.
All types of cancer can result from uncontrolled Cell Growth And Division of any of the different kinds of cells in the body.
The uncontrolled cell growth produces a mass of cells which are called tumors or neoplasm tumors may be Benign or Malignant.
Oncogenes encode proteins that promote the loss of growth control and the conversion of a cell to a malignant state and Cell Proliferation.
Oncogenes may lead to genetic instability, prevent a cell from becoming a victim of apoptosis, or promote metastasis.
Tumor‐suppressor genes act as a cell’s brakes; they encode proteins that restrain cell growth and prevent cells from becoming malignant.
The first tumor suppressor gene to be studied and eventually cloned is associated with a rare childhood cancer of the retina of the eye, called Retinoblastoma.
The gene responsible for this disorder is named RB .
RAS refers to a family of genes that encode proteins involved in cell signaling pathways regulating cell growth and differentiation.
APC stands for Adenomatous Polyposis Coli.
It's a tumor suppressor gene that plays a critical role in regulating cell proliferation and maintaining the integrity of the epithelial lining of the colon and rectum.
Mutations in the APC gene are associated with familial adenomatous polyposis (FAP), an inherited condition characterized by the development of numerous polyps in the colon and rectum, leading to a significantly increased risk of colorectal cancer.
The cells of patients with this condition were found to contain a deletion of a small portion of chromosome 5, which was subsequently identified as the site of a tumor‐suppressor gene called Adenomatous Polyposis Coli, or APC .
APC is known to suppress the Wnt pathway, which activates the transcription of genes, that promote cell proliferation.
Loss of APC function could therefore lead directly to abnormal chromosome segregation and aneuploidy.
Introduction to Cancer
Stem cells and cancer cells
major pathways that lead to formation of tumors.
Tumor Supressors
Colon cancer to prove Knudson hypothesis.
The modern treatments available to treat cancer.
This presentation is targeted for MBBS, MD and BDS students that describes briefly about aetiopathogenesis, tumour markers, anti cancer agents, apoptosis
ONCOGENE AND PROTOONCOGENE
P53 GENE AND ITS APPLICATION IN CANCER ETIOLOGY
TUMOUR SUPPRESSOR GENE AND BCA AND BAC GENE AND ITS APPLICATION ON THE APOPTOSIS AND DEATH RECEPTORS
An oncovirus is a virus that can cause cancer. This term originated from studies of acutely transforming retroviruses in the 1950–60s, often called oncornaviruses to denote their RNA virus origin. It now refers to any virus with a DNA or RNA genome causing cancer and is synonymous with "tumor virus" or "cancer virus".
This presentation elaborates the economic crisis in Sri Lanka. It explains the causes of economic instability in Sri Lanka and the factors worsening it. Such miserable economic situation is presenting valuable lessons for other sister asian countries to counter their economic instability. Pakistan, a sister country of Sri Lanka is facing severe political and economic instability these days. Pakistan is learning from the Sri Lankan economic situation and tending to improve its economy but the extreme political instability is hurdling and exacerbating the economic crisis. However, policies are underway to counter the economic crisis and more probably Pakistan will escape the Sri Lankan experience.
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
1. Genetics ofcancer
Cell cycle and cancer
Two-hit mutation model
Oncogenes and RNA/DNA tumor viruses
Tumor suppressor genes
Mutator genes
Carcinogens: chemicals and radiation
Some basic terminology:
Oncogenesis = process of initiation of tumors (cancer) in an organism (onkos = mass; genesis = birth)
Tumor = tissue composed of cells that deviate from normal program of cell division and differentiation.
Benign tumor = tumor cells remain together in a single mass and do not invade or disrupt surrounding tissues
Malignant tumor = tumor cells invade and disrupt surrounding tissues (diagnosed as cancer,and such cells can
transform other cells to the cancerous state).
Metastasis = spread of malignant tumor cells throughout the body (typically through the blood and lymphatic system)
Howdo we define cancer?
Cancer is a group of disorders that causes cells to escape normal controls on cell division
cancer cells divide more frequently
cancer cells are not inhibited by contact with other cells and can form tumors
cancer cells can invade other tissues, a process called metastasis
Oncogenesis arises from:
Spontaneous gene or chromosome mutations.
Exposure to mutagens or radiation.
Activity of genes introduced by tumor viruses.
Some cancers are inherited (individuals may be predisposed).
Cell cycle and cancer:
Cell differentiation occurs as cells proliferate to form tissues. Cell differentiation correlates with loss of ability to
proliferate; highly specialized cells are terminally differentiated. Terminally differentiated cells have a finite life span,
and are replaced with new cells produced from stem cells. Stem cells are capable of self-renewal; cells divide without
undergoing terminal differentiation.
Cell death (apoptosis) is equally important. Apoptosis is the normal outcome for most cells, and the sequence of
events must be programmed correctly. Otherwise cells don’t die when they should, and uncontrolled cell division can
result in cancer.
Chemical Signals that Control the Cell Cycle
1. Cyclin and Kinase -proteins that initiate mitosis
-requires buildup of cyclin to pair with kinase
2. Hormones -chemical signals from specialized glands that stimulate mitosis
3. Growth Factors -chemical factors produced locally that stimulate mitosis
Normal cell cycle is controlled by signal transduction:
Growth factors bind to surface receptors on the cell; transmembrane proteins relay information to the cell by signal
transduction.
2. Two types ofgrowth factors:
Growth factors stimulate cell division.
Growth-inhibiting factors inhibit cell division.
Healthy cells divide only when growth factor and growth-inhibiting factor balance favors cell division. Cancer cells
divide without constraint. Cancer is primarily caused by mutations in growth and growth-inhibiting factor genes,and
pathways that inhibit the normal sequence of events associated with apoptosis.
Two-hit mutation model for cancer:
Most cancers result from mutations in cellular genes. Other cancers are caused by viruses.
Two types ofcancer:
Sporadic more frequent, no hereditary cause
Familial less frequent, hereditary
In cancer cells, the RAS gene product is locked
into its GTP-binding shape and does not require a
signal at the receptor in order to stimulate cell
division
In response to growth factor binding at receptor,
the Ras gene product combines with GTP to
promote cell division
3. Retinoblastoma (OMIM-180200) shows sporadic and hereditary forms and fits the pattern of a two-hit model. Most
common eye tumor of children. Occurs from birth to 4 years of age. Early treatment with gamma radiation is 90%
effective.
Two-hit mutation model for retinoblastoma (OMIM-180200):
Sporadic retinoblastoma
60% of retinoblastoma cases.
Develops in children with no family history.
Occurs in one eye.
Hereditary retinoblastoma
40% of retinoblastoma cases.
Onset typically is earlier than sporadic cases.
Multiple tumors involving both eyes.
Consistent pedigrees; siblings and offspring develop the same type of tumors.
Alfred Knudson’s (1971) model for retinoblastoma (OMIM-180200):
Two mutations are required for the development of
retinoblastoma.
Sporadic retinoblastoma
Child starts with two wild type alleles (RB+/RB+).
Both alleles must mutate to produce the disease
(RB/RB).
Probability of both mutations occurring in the same
cell is low; only one tumor forms (e.g., one eye).
Hereditary retinoblastoma
Child starts with heterozygous alleles (RB/RB+).
Only one mutation is required to produce disease
(RB/RB).
Mutations resulting in loss of heterozygosity (LOH)
are more probable in rapidly dividing cells, and
multiple tumors occur (e.g., both eyes).
Retinoblastoma was mapped to the long arm of
chromosome 13 (13q14.1-q14.2). Mutations occur in a gene
that encodes a growth inhibitory factors (a tumor suppressor
gene). Retinoblastoma is rare among cancers; most cancers
result from a series of mutations in many different genes. So
retinoblastoma is easier to treat.
Cancer and genes:
Three classes of genes frequently are mutated in cancer:
Proto-oncogenes ( oncogenes)
Tumor suppressor genes
Mutator genes
Proto-oncogenes oncogenes:
Proto-oncogenes = Proto-oncgenes are genes that possess normal gene products and stimulate normal cell
development.
4. Oncogenes = Oncogenes arise from mutant proto-oncogenes. Oncogenes are more active than normal or active at
inappropriate times and stimulate unregulated cell proliferation.
Some tumor viruses that infect cells possess oncogenes:
RNA tumor viruses = possess viral oncogenes capable of transforming cells to a cancerous state.
DNA tumor viruses = do not carry oncogenes, but induce cancer by activity of viral gene products on the cell
Proto-oncogene and oncogene protein products:
~100 different oncogenes have been identified.
To understand the cancer,must understand the function of protein products coded by the proto-oncogenes.
All known proto-oncogenes are involved in positive control of cell growth and division.
Two classes:
o Growth factors, regulatory genes involved in the control of cell multiplication.
o Protein kinases, add phosphate groups to target proteins, important in signal transduction pathways.
Mutations relax cell control of growth, allowing unregulated proliferation.
Retroviruses and oncogenes:
Single-stranded RNA virus that replicates via double-stranded
DNA intermediate.
RNA is converted to cDNA by reverse transcriptase.
DNA integrates into host chromosome and is transcribed.
Retroviruses typically possess:
2 copies of a 7-10 kb ssRNA genome
protein viral core
glycolipid envelope (glycoproteins recognize host
cells)
Transducing retroviruses possesses oncogenes,which
can cause cancer when integrated into the host
chromosome.
All RNA tumor viruses are retroviruses.
RNA viral oncogenes are altered forms of normal host
genes that occur in the virus genome.
Examples of retroviruses include:
Rous sarcoma virus (RSV), Feline leukemia
virus, Mouse mammary tumor virus
Human immunodeficiency virus (HIV)
Not all retroviruses are transducing or cause cancer.
Life cycle ofa retrovirus:
First characterized in 1910 by F. Peyton Rous from a
chicken tumor, later named the Rous sarcoma virus.
1. ssRNA genome is released from the virus
particle and is reverse transcribed to dsDNA
(proviral DNA).
2. Reverse transcriptase occurs in the virus
particle and lacks 3’ to 5’ exonuclease activity
(no proofreading lots of mutations).
5. 3. Proviral DNA and host chromosome DNA cross-over and are joined by recombination.
4. Host RNA polymerase transcribes proviral DNA and produces viral mRNAs required for the virus life cycle.
Cell Cycle Checkpoints
Genetic Mutations That Can Cause Cancer
Tumor Suppressor Genes
Genes that inhibit cell division are inactivated.
Mutation in a gene that halts the cell cycle in G1
causes retinoblastoma.
Mutation in p53, a gene that promotes apoptosis if a
cell has damaged DNA,leads to a variety of
cancers.
Mutation in BRCA1,involved in tumor suppression
and DNA repair, leads to inherited breast cancer.
p53 tumor suppressor genes:
Mutations in p53 are implicated in ~50% of human
cancers,including cancers of the: breast,brain,
liver, lung, colorectal, bladder, and blood
Development of tumors requires mutations on two
p53 alleles.
Codes a 393 amino acid protein involved in
transcription, cell cycle control, DNA repair, and
apoptosis (programmed cell death).
p53 binds to severalgenes and interacts with at least
17 cellular and viral proteins.
Genes that promote DNA repair (DNA Repair
Genes) are inactivated.
BRCA1 is a tumor suppressor involved in DNA repair. Faulty copies of BRCA1 cause inherited breast cancer.
The disease Xeroderma Pigmentosum results from a defect in excision repair.
6. Breast cancer tumor suppressor genes:
Breast cancer affects 1 in 10 women and
represents 31% of cancers in women
(~185,000 women diagnosed each year).
~5% of breast cancers are hereditary; age of
onset for hereditary breast cancer is earlier
than other forms (mutations at 2 alleles).
Many genes involved; BRCA1 and BRCA2
are thought to be tumor suppressor genes.
BRCA1 is important for homologous
recombination, cellular repair of DNA
damage, and transcription of mRNA.
Mutations in BRCA1 also are involved in
ovarian cancer.
BRCA2 plays a role in timing of mitosis in
the cell cycle.
Mutator genes:
Mutator gene increases spontaneous mutation rate of other genes.
Mutator gene products are involved in DNA replication and repair; mutations make the cell error prone.
HNPCC-OMIM 120435, Human non-polyposis colon cancer
Mutation at any one of 4 genes (hMSH2, hMLH1, hPMS1, hPMS2) leads to predisposition.
Tumor formation requires mutation at the second allele.
All four genes have homologs in yeast.
DNA blood tests are available for all four genes.