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Genetic mutation
                1

     DR. JIBRIL IHSAN MUNZALI
REGISTRAR, DEPT OF HISTOPATHOLOGY
                NHA




                                    4/7/2013
Outline
                                  2

 Introduction
A. What are genes?
B. What are mutations?
C. What does genetic mutation mean?

 Types of genetic mutation

 Causes of genetic mutation

 Diseases caused by genetic mutation

 Diagnosis/Treatment

 Conclusion


                                         4/7/2013
Genes
                                3


 A gene is a segment of DNA
  that encodes a specific
  peptide or protein.



 DNA is the genetic material
  within the nucleus or
  mitochondria where an
  individual’s genetic
  information is stored.


                                    4/7/2013
Nucleotides
                                  4

 DNA is composed of sequence

  of nucleotides



 Each nucleotide is made up of

  three components.



 There are four types of

  nucleotide bases.




                                          4/7/2013
DNA

                                                         5

   The nucleotides are covalently bound to each other
    through phosphodiester bonds to form a linear
    structure.



   Nucleotides are non covalently bound to each
    other through hydrogen bonds forming a double
    helix.



   DNA polymers combine with proteins termed
    histones to form nucleosomes. These fibers form
    very compact structures known as chromosomes.



   The order or sequence of the nucleotides in the
    DNA chain is the genetic code present within the
    cell.




                                                             4/7/2013
Protein synthesis
                            6


Protein synthesis               Genetic code




                                               4/7/2013
DNA Replication
                                7
 Replication of genetic
  material occurs during the
  S phase of the cell cycle

 DNA polymerase needs a
  pre-existing DNA to form
  two new double bond
  strands identical to the
  original strand

 Every new double strand is
  semi-conservative (half old
  and half new)


                                      4/7/2013
Genetic mutation
                             8
 Genetic mutation is a
  permanent heritable
  change in a gene of an
  individual.

 It leads to formation of
  abnormal proteins or
  non-production of
  proteins.




                                      4/7/2013
Mutations
                                    9

 Mutations occurs at a frequency of about 1 in every 1 billion base
  pairs.

 Everybody has about 6 mutations in each cell in their body.

 May occur in either introns or exons or even mitochodrial genes.

 Mutations could be germline or somatic

 It could be deleterious or beneficial.



 May follow classic Mendelian patterns or non classic mode of
  inheritance.


                                                                 4/7/2013
Causes of genetic mutation
                                     10

 Could occur spontaneously or could be acquired


 Spontaneous mutations arise during normal DNA replication as DNA
  polymerase may make mistakes during replication.


 If DNA errors are not repaired, mutations arise.




 Other spontaneous types of DNA damage include tautameric
  shifts, alkylation, oxidation or hydrolysis

                                                              4/7/2013
Examples of base damage
                   11
                         These types of damages
                          cause the chemical
                          structure of the bases to
                          change.
 Hydroxylation

                         They may change to
                          another type of base.

Tautameric shift         They then “mis pair” with
                          incorrect bases.

                         This leads to abnormality
                          in the reading frame.
Oxidation
                                                  4/7/2013
Acquired causes
                              12
 Acquired causes include
 drugs, radiation, viruses.

 Drugs may cause
 alkylation, oxidation etc

 Ionizing radiation causes
 breaks and cross linking

 Viruses may cause
 degradation of certain
 genes.

                                      4/7/2013
Types of genetic mutation
                                13


1.   Point mutations: This is the substitution of one nucleotide
     with another changing the sequence of the codon. This
     could lead to a misense, nonsense or even synonymous
     mutation.


2. Frame shift mutations: This is when there is insertion or
     deletion of a single base or a number of bases not in the
     multitude of 3 causing alteration of the reading frame.


                                                           4/7/2013
Types of mutations
                                   14


3. Deletions of a codon/three-base deletion: Leads to deletion of
     an amino acid in a protein thus the protein is defective eg cystic
     fibrosis



4.   Large deletions: Could also occur leading to deletion of the
     whole gene leading to absent protein or hybrid protein.



    Trinucleotide repeats


                                                                 4/7/2013
Point mutation: Nonsense mutation
                15




                                    4/7/2013
Missense mutation
                        16

 Sickle cell anaemia




                                    4/7/2013
Frameshift mutation
         17




                      4/7/2013
Frame shift mutation
         18




                       4/7/2013
Three base deletion
         19




                      4/7/2013
20   4/7/2013
Diagnosis/Treatment
                                21

 Biochemical testing of affected protein.

 PCR can also be used to amplify and identify the affected
  gene/genes .

 There are currently no “cures” for genetic disorders,.

 Gene therapy is being looked into: It may be possible to
  replace a defective gene with a normal copy.

 Second, the function of an abnormal gene may be abrogated
  by administering anti-sense RNA or by RNA-mediated
  interference


                                                              4/7/2013
Conclusion
                              22

 Genetic mutations are important causes of both heritable
  and acquired human diseases.

 They usually affect genes with large effects.


 Environmental factors such as chemicals, drugs and
  radiations are important causes of radiation.

 Currently, genetic mutations represent a group of
  diseases, a large extent to which are still unknown and
  treatment of which is still under research.

                                                       4/7/2013
THANK YOU VERY MUCH.
         23




                       4/7/2013

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Genetic mutation

  • 1. Genetic mutation 1 DR. JIBRIL IHSAN MUNZALI REGISTRAR, DEPT OF HISTOPATHOLOGY NHA 4/7/2013
  • 2. Outline 2  Introduction A. What are genes? B. What are mutations? C. What does genetic mutation mean?  Types of genetic mutation  Causes of genetic mutation  Diseases caused by genetic mutation  Diagnosis/Treatment  Conclusion 4/7/2013
  • 3. Genes 3  A gene is a segment of DNA that encodes a specific peptide or protein.  DNA is the genetic material within the nucleus or mitochondria where an individual’s genetic information is stored. 4/7/2013
  • 4. Nucleotides 4  DNA is composed of sequence of nucleotides  Each nucleotide is made up of three components.  There are four types of nucleotide bases. 4/7/2013
  • 5. DNA 5  The nucleotides are covalently bound to each other through phosphodiester bonds to form a linear structure.  Nucleotides are non covalently bound to each other through hydrogen bonds forming a double helix.  DNA polymers combine with proteins termed histones to form nucleosomes. These fibers form very compact structures known as chromosomes.  The order or sequence of the nucleotides in the DNA chain is the genetic code present within the cell. 4/7/2013
  • 6. Protein synthesis 6 Protein synthesis Genetic code 4/7/2013
  • 7. DNA Replication 7  Replication of genetic material occurs during the S phase of the cell cycle  DNA polymerase needs a pre-existing DNA to form two new double bond strands identical to the original strand  Every new double strand is semi-conservative (half old and half new) 4/7/2013
  • 8. Genetic mutation 8  Genetic mutation is a permanent heritable change in a gene of an individual.  It leads to formation of abnormal proteins or non-production of proteins. 4/7/2013
  • 9. Mutations 9  Mutations occurs at a frequency of about 1 in every 1 billion base pairs.  Everybody has about 6 mutations in each cell in their body.  May occur in either introns or exons or even mitochodrial genes.  Mutations could be germline or somatic  It could be deleterious or beneficial.  May follow classic Mendelian patterns or non classic mode of inheritance. 4/7/2013
  • 10. Causes of genetic mutation 10  Could occur spontaneously or could be acquired  Spontaneous mutations arise during normal DNA replication as DNA polymerase may make mistakes during replication.  If DNA errors are not repaired, mutations arise.  Other spontaneous types of DNA damage include tautameric shifts, alkylation, oxidation or hydrolysis 4/7/2013
  • 11. Examples of base damage 11  These types of damages cause the chemical structure of the bases to change. Hydroxylation  They may change to another type of base. Tautameric shift  They then “mis pair” with incorrect bases.  This leads to abnormality in the reading frame. Oxidation 4/7/2013
  • 12. Acquired causes 12  Acquired causes include drugs, radiation, viruses.  Drugs may cause alkylation, oxidation etc  Ionizing radiation causes breaks and cross linking  Viruses may cause degradation of certain genes. 4/7/2013
  • 13. Types of genetic mutation 13 1. Point mutations: This is the substitution of one nucleotide with another changing the sequence of the codon. This could lead to a misense, nonsense or even synonymous mutation. 2. Frame shift mutations: This is when there is insertion or deletion of a single base or a number of bases not in the multitude of 3 causing alteration of the reading frame. 4/7/2013
  • 14. Types of mutations 14 3. Deletions of a codon/three-base deletion: Leads to deletion of an amino acid in a protein thus the protein is defective eg cystic fibrosis 4. Large deletions: Could also occur leading to deletion of the whole gene leading to absent protein or hybrid protein.  Trinucleotide repeats 4/7/2013
  • 15. Point mutation: Nonsense mutation 15 4/7/2013
  • 16. Missense mutation 16  Sickle cell anaemia 4/7/2013
  • 17. Frameshift mutation 17 4/7/2013
  • 18. Frame shift mutation 18 4/7/2013
  • 19. Three base deletion 19 4/7/2013
  • 20. 20 4/7/2013
  • 21. Diagnosis/Treatment 21  Biochemical testing of affected protein.  PCR can also be used to amplify and identify the affected gene/genes .  There are currently no “cures” for genetic disorders,.  Gene therapy is being looked into: It may be possible to replace a defective gene with a normal copy.  Second, the function of an abnormal gene may be abrogated by administering anti-sense RNA or by RNA-mediated interference 4/7/2013
  • 22. Conclusion 22  Genetic mutations are important causes of both heritable and acquired human diseases.  They usually affect genes with large effects.  Environmental factors such as chemicals, drugs and radiations are important causes of radiation.  Currently, genetic mutations represent a group of diseases, a large extent to which are still unknown and treatment of which is still under research. 4/7/2013
  • 23. THANK YOU VERY MUCH. 23 4/7/2013

Editor's Notes

  1. The protein-coding instructions from the genes, as contained in DNA, are transcribed indirectly through mRNA.mRNA moves from the nucleus to the cytoplasm and serves as a template for protein synthesisThe ribosomal system translates the codon into amino acid chain for protein synthesisGenetic code contains codons that instruct which amino acids are required for specific protein and polypeptide synthesis
  2. Loss of function or reduced function if it was a nonsense mutation or missense mutationBeneficial eg 32 base pair deletion of human CCR5 confers HIV, bubonic plague and smallpox immunityGermline mutations lead to constitution al mutations in all the cells of the offspring. Somatic mutations principally lead to cancers.If the gene codes a protein it leads to a heritable disease. Usually accumulation of substrate or metabolite, or abnormal protein formed or failure to complete a metabolic pathway. If a DNA repair gene is affected it may lead to heritable predisposition to cancers.Mutations in introns may lead to non transcriptionNon classic inheritance egtrinucleotide repeat lead to accumulation of aggregated protein eghuntinton’s diseaseOR mitochodrial mutations because mitochondrial genes do not divide equally during replication so disproportionate number OR gonadalmosaicism when there are mutations in individuals germ cells but phenotypically normal OR genomic imprinting…deactivationtion of a maternal or paternal gene