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ECTOMYCORRHIZAL FUNGAL
COMMUNITIES AND WORK DONE IN
PAKISTAN
Submitted to: Dr. Abdul Nasir Khalid
Submitted by: Jannat Iftikhar
MS16-01
MS 2nd semester
Subject: Mycosymbiosis 1
Contents
• Introduction
• ECM structures
• Community, fungal communities and ECM communities
• ECM communities above and below ground
• Identification and characterization of fungal communities
• Factors affecting ECM fungal communities
• Significance
• Role in succession
• ECM fungal communities; study in Pakistan
• Recent discoveries
• Some ectomycorrhizal fungi reported from Pakistan
• Conclusion
2
Introduction
• It is a form of symbiotic relationship that occurs within
a fungal partner called mycobiont with
the roots of plant species also known as phytobiont.
• Ectomycorrhizas composed at least 65 genera of
mycobiont. Mostly belongs to Basidiomycetes.
• They form entirely intercellular structure and never
penetrate inside the cell.
3
ECM structructures
• Hartig’s net
• Mantle
• Extraradical hyphae
• Sporocarp
4
Sporocarps
ECM structures
Community
According to Whittaker (1975)
• “An assemblage of population of plants, animal bacteria,
and fungi that live in an environment and interact with one
another forming together a distinctive living system with
its own composition, structure, environmental relations,
development and function”.
5
Fungal community
• The concept of a group of organisms growing in a
particular area and requiring similar conditions is easier to
apply to some fungal habitats and groups of fungi than to
others.
• Fungal communities are inextricably related to
communities and populations of plants and animals in
ecosystem.
6
Ectomycorrhizal fungal communities
• Fungi forming ectomicorrhizal association with plant roots.
• These communities are present above ground and below
ground.
• Community structure may be different above and below
ground
7
ECM communities above ground
• Epigeous fruiting bodies i.e Russula, Cortinarius, Inocybe.
• Different areas have different community structures in
terms of richness and diversity.
8
Russula sp. Inocybe sp.
ECM communities below ground
• Due to some unfavorable conditions some fungi do not
have chance to make fruiting bodies or they may be
hypgeous (Tylospora, Tomentella etc.).
• By this observation we cannot assume that ECM fungi are
totally absent in that area.
• There can be 65-80 ECM species with roots of mixed
coniferous forests in a single hectare.
9
10
Tylospora sp.
Piloderma sp.
Amphinema sp.
Tomentella sp.
Identification and characterization
of fungal community
1) Trace method
2) Morphotypes study
3) Culturing methods
4) Molecular/biochemical methods
11
An example of an ectomycorrhizal symbiosis, showing root tip mycelia from the
genus Amanita
12
Factors effecting ECM
communities
• Host effect on ectomycorrhizal fungal community.
• Size of host plant and its distribution on landscape
• Host specific mycobionts.
• The EMF community structure is affected by a number of biotic and
abiotic factors such as EMF succession, interspecific interaction of
EMF, litter quality, climate, soil type and soil nutrient status.
• Nitrogen availability may be a major factor structuring ectomycorrhizal
fungal communities. Atmospheric nitrogen (N) deposition has been
implicated in the decline of ectomycorrhizal fungal (EMF) sporocarp
diversity.
13
Significance
• Promote fine root development
• Produce antibiotics, hormones, vitamins for plants
• Protect plant root against pathogen
• Moderating effect of heavy metal
• Promote soil structure
• Sustaining forest ecosystem
• Critical in regeneration of canopy trees
• Determine host plant community
• Role in succession
14
Role in succession
• Observation of plant colonization in successional seral
environments have indicated that nonmycorrhizal or facultative
mycorrhizal plants are often first to establish in severely
disturbed sites.
• There appear to be continuum mycorrhizal dependency along
successional gradients.
• These are replaced by obligately arbuscular mycorrhizal
followed by ectomycorrhizal plants and ultimately ericoid plant
species.
15
• Plant establishment thus follow a predictable pattern
towards communities with a greater dependency on
mycorrhizal fungi with different characteristics in their
resources especially N and P.
16
17
ECM Fungal Communities: Study in Pakistan
• In plains of Punjab with subtropical to semiarid climate,
sub-tropical thorn forest of vegetation is represented by
several species of deciduous and evergreen trees.
• Among these, Populus euramericana, Salix babylonica, S.
tetrasperma, Dalbergia sissoo, Eucalyptus
comendulensis, Morus alba and Acacia nilotica are
among the dominant tree species.
18
• In temperate climate of Northern areas, Himalayan and
Hindu-kush ranges are covered with dense forests of
conifers along with scattered vegetation of deciduous
trees.
• The dominant tree species are Pinus wallichiana, Abies
pindrow, Cedrus deodara, Picea smithiana, Juglans regia,
Salix spp. and Populus spp.
19
Salix and Populus
• Work done on ECM association in Salix and Populus from
two different ecological regions (KPK & LHR.)
• Dominant specie associated with Populus in KPK was
Populirhiza followed by Tomentella whereas in Lahore it
was Quercirhiza.
• Dominant species associated with Salix was Dermocybe
in KPK and Salicirhiza lahorensis in Lahore folowed by
Lactarius sp.
20
Himalayan Spruce (Picea smithiana)
• First records of ECM with Picea from Pakistan was
described by Khan (1970)
• He reported Lycoperdon in symbiotic association with
Spruce.
• Niazi et al,. (2009) described Amanita rubescens and
three morphotypes based on morphoanatomical feature
• Collection was done from Mukshpuri and Swat valley
• Dominant community was of Sebacina epigea followed by
Tomentella sp.
21
ECM with Eucalyptus
• An evaluation of the ectomycorrhizal status of Eucalyptus
plantations in different areas of the Punjab Province was done.
• This study reveals a very low diversity of below-ground
ectomycorrhizal fungi associated with Eucalyptus.
• Scleroderma bovista was frequently associated with
Eucalyptus.
• Scleroderma aurantium and Pisolithus tinctorius were
infrequent associates with eucalypt roots.
22
Pinus spp.
• In Lahore dominant community was Rhizopogon followed
by Hydnobolites.
• Samples collected from KPK show dominant community
was Pinirhiza sp.
23
Hydnobolites sp.Rhizopogon sp.
Recent discoveries
• Peziza succosella and its ectomycorrhiza associated with
Cedrus deodara from Himalayan moist temperate forests
of Pakistan (Jabeen et al,. 2015)
• New reports of Inocybe from pine forests in Pakistan
(Saba et al,. 2015)
• Inocybe kohistanensis, a new species from Swat,
Pakistan (Jabeen et al,. 2016)
24
25
Some ectomycorrhizal fungi reported from Pakistan
26
Genea
Tuber Peziza
Helvella
27
Suillus
Sarcodon Russula Cantharellus Clavariadelphus
Amanita TomentellaBoletus
28
Clitocybe Cortinarius Craterellus Descolea
Dermocybe Geastrum Gomphus Hydnum
29
Inocybe Lactarius Lyophyllum Porphyrellus
Ramaria Russula Tricholoma Scleroderma
30
LepistaLepiota . Flamullina
Rhodocybe Crassisporium Laccaria
Conclusion
• ECM communities are very important for plant survival.
• Different environment and different host plants supports
different fungal communities.
• Community richness and diversity is different below and
above ground.
• Due to its importance, role in sustaining forest
ecosystems, there is need to study these communities.
31
References
• John Dighton, James F. White, The Fungal Community: Its Organization
and Role in the Ecosystem, Third Edition
• Michael Allen, Mycorrhizal Functioning: An Integrative Plant-Fungal
Process
• Jabeen S., Ahmad I., Khalid A.N., Inocybe kohistanensis, a new species
from Swat, PakistanTurkish Journal of Botany(2016) 40:
• Jabeen S, Sarwar S, Niazi ARK, Khalid AN. Checklist of
Ectomycorrhizae from Pakistan. Annals of Applied Bio Sciences.
2014;1:R10-R20
• Bashir H and Khalid AN. Morpho-anatomical and molecular
characterisation of ectomycorrhizae associated with Eucalyptus species
growing in different areas of the Punjab Province, Pakistan, Australian
Journal of Botany, 2014, 62, 689–697.
• Takahide A. Ishida,Kazuhide Nara,Taizo Hogetsu, Host effects on
ectomycorrhizal fungal communities: insight from eight host species in
mixed conifer–broadleaf forests New Phytologist (2007) 174: 430 –440.
• Erik A. Lilleskov, Timothy J. Fahey, Thomas R. Horton, Gary M. Lovett,
belowground ectomycorrhizal fungal community change over a nitrogen
deposition gradient in alaska, ecological society of america, 2002.
32
33

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ectomycchorhizal fungi

  • 1. ECTOMYCORRHIZAL FUNGAL COMMUNITIES AND WORK DONE IN PAKISTAN Submitted to: Dr. Abdul Nasir Khalid Submitted by: Jannat Iftikhar MS16-01 MS 2nd semester Subject: Mycosymbiosis 1
  • 2. Contents • Introduction • ECM structures • Community, fungal communities and ECM communities • ECM communities above and below ground • Identification and characterization of fungal communities • Factors affecting ECM fungal communities • Significance • Role in succession • ECM fungal communities; study in Pakistan • Recent discoveries • Some ectomycorrhizal fungi reported from Pakistan • Conclusion 2
  • 3. Introduction • It is a form of symbiotic relationship that occurs within a fungal partner called mycobiont with the roots of plant species also known as phytobiont. • Ectomycorrhizas composed at least 65 genera of mycobiont. Mostly belongs to Basidiomycetes. • They form entirely intercellular structure and never penetrate inside the cell. 3
  • 4. ECM structructures • Hartig’s net • Mantle • Extraradical hyphae • Sporocarp 4 Sporocarps ECM structures
  • 5. Community According to Whittaker (1975) • “An assemblage of population of plants, animal bacteria, and fungi that live in an environment and interact with one another forming together a distinctive living system with its own composition, structure, environmental relations, development and function”. 5
  • 6. Fungal community • The concept of a group of organisms growing in a particular area and requiring similar conditions is easier to apply to some fungal habitats and groups of fungi than to others. • Fungal communities are inextricably related to communities and populations of plants and animals in ecosystem. 6
  • 7. Ectomycorrhizal fungal communities • Fungi forming ectomicorrhizal association with plant roots. • These communities are present above ground and below ground. • Community structure may be different above and below ground 7
  • 8. ECM communities above ground • Epigeous fruiting bodies i.e Russula, Cortinarius, Inocybe. • Different areas have different community structures in terms of richness and diversity. 8 Russula sp. Inocybe sp.
  • 9. ECM communities below ground • Due to some unfavorable conditions some fungi do not have chance to make fruiting bodies or they may be hypgeous (Tylospora, Tomentella etc.). • By this observation we cannot assume that ECM fungi are totally absent in that area. • There can be 65-80 ECM species with roots of mixed coniferous forests in a single hectare. 9
  • 11. Identification and characterization of fungal community 1) Trace method 2) Morphotypes study 3) Culturing methods 4) Molecular/biochemical methods 11
  • 12. An example of an ectomycorrhizal symbiosis, showing root tip mycelia from the genus Amanita 12
  • 13. Factors effecting ECM communities • Host effect on ectomycorrhizal fungal community. • Size of host plant and its distribution on landscape • Host specific mycobionts. • The EMF community structure is affected by a number of biotic and abiotic factors such as EMF succession, interspecific interaction of EMF, litter quality, climate, soil type and soil nutrient status. • Nitrogen availability may be a major factor structuring ectomycorrhizal fungal communities. Atmospheric nitrogen (N) deposition has been implicated in the decline of ectomycorrhizal fungal (EMF) sporocarp diversity. 13
  • 14. Significance • Promote fine root development • Produce antibiotics, hormones, vitamins for plants • Protect plant root against pathogen • Moderating effect of heavy metal • Promote soil structure • Sustaining forest ecosystem • Critical in regeneration of canopy trees • Determine host plant community • Role in succession 14
  • 15. Role in succession • Observation of plant colonization in successional seral environments have indicated that nonmycorrhizal or facultative mycorrhizal plants are often first to establish in severely disturbed sites. • There appear to be continuum mycorrhizal dependency along successional gradients. • These are replaced by obligately arbuscular mycorrhizal followed by ectomycorrhizal plants and ultimately ericoid plant species. 15
  • 16. • Plant establishment thus follow a predictable pattern towards communities with a greater dependency on mycorrhizal fungi with different characteristics in their resources especially N and P. 16
  • 17. 17 ECM Fungal Communities: Study in Pakistan
  • 18. • In plains of Punjab with subtropical to semiarid climate, sub-tropical thorn forest of vegetation is represented by several species of deciduous and evergreen trees. • Among these, Populus euramericana, Salix babylonica, S. tetrasperma, Dalbergia sissoo, Eucalyptus comendulensis, Morus alba and Acacia nilotica are among the dominant tree species. 18
  • 19. • In temperate climate of Northern areas, Himalayan and Hindu-kush ranges are covered with dense forests of conifers along with scattered vegetation of deciduous trees. • The dominant tree species are Pinus wallichiana, Abies pindrow, Cedrus deodara, Picea smithiana, Juglans regia, Salix spp. and Populus spp. 19
  • 20. Salix and Populus • Work done on ECM association in Salix and Populus from two different ecological regions (KPK & LHR.) • Dominant specie associated with Populus in KPK was Populirhiza followed by Tomentella whereas in Lahore it was Quercirhiza. • Dominant species associated with Salix was Dermocybe in KPK and Salicirhiza lahorensis in Lahore folowed by Lactarius sp. 20
  • 21. Himalayan Spruce (Picea smithiana) • First records of ECM with Picea from Pakistan was described by Khan (1970) • He reported Lycoperdon in symbiotic association with Spruce. • Niazi et al,. (2009) described Amanita rubescens and three morphotypes based on morphoanatomical feature • Collection was done from Mukshpuri and Swat valley • Dominant community was of Sebacina epigea followed by Tomentella sp. 21
  • 22. ECM with Eucalyptus • An evaluation of the ectomycorrhizal status of Eucalyptus plantations in different areas of the Punjab Province was done. • This study reveals a very low diversity of below-ground ectomycorrhizal fungi associated with Eucalyptus. • Scleroderma bovista was frequently associated with Eucalyptus. • Scleroderma aurantium and Pisolithus tinctorius were infrequent associates with eucalypt roots. 22
  • 23. Pinus spp. • In Lahore dominant community was Rhizopogon followed by Hydnobolites. • Samples collected from KPK show dominant community was Pinirhiza sp. 23 Hydnobolites sp.Rhizopogon sp.
  • 24. Recent discoveries • Peziza succosella and its ectomycorrhiza associated with Cedrus deodara from Himalayan moist temperate forests of Pakistan (Jabeen et al,. 2015) • New reports of Inocybe from pine forests in Pakistan (Saba et al,. 2015) • Inocybe kohistanensis, a new species from Swat, Pakistan (Jabeen et al,. 2016) 24
  • 25. 25 Some ectomycorrhizal fungi reported from Pakistan
  • 27. 27 Suillus Sarcodon Russula Cantharellus Clavariadelphus Amanita TomentellaBoletus
  • 28. 28 Clitocybe Cortinarius Craterellus Descolea Dermocybe Geastrum Gomphus Hydnum
  • 29. 29 Inocybe Lactarius Lyophyllum Porphyrellus Ramaria Russula Tricholoma Scleroderma
  • 31. Conclusion • ECM communities are very important for plant survival. • Different environment and different host plants supports different fungal communities. • Community richness and diversity is different below and above ground. • Due to its importance, role in sustaining forest ecosystems, there is need to study these communities. 31
  • 32. References • John Dighton, James F. White, The Fungal Community: Its Organization and Role in the Ecosystem, Third Edition • Michael Allen, Mycorrhizal Functioning: An Integrative Plant-Fungal Process • Jabeen S., Ahmad I., Khalid A.N., Inocybe kohistanensis, a new species from Swat, PakistanTurkish Journal of Botany(2016) 40: • Jabeen S, Sarwar S, Niazi ARK, Khalid AN. Checklist of Ectomycorrhizae from Pakistan. Annals of Applied Bio Sciences. 2014;1:R10-R20 • Bashir H and Khalid AN. Morpho-anatomical and molecular characterisation of ectomycorrhizae associated with Eucalyptus species growing in different areas of the Punjab Province, Pakistan, Australian Journal of Botany, 2014, 62, 689–697. • Takahide A. Ishida,Kazuhide Nara,Taizo Hogetsu, Host effects on ectomycorrhizal fungal communities: insight from eight host species in mixed conifer–broadleaf forests New Phytologist (2007) 174: 430 –440. • Erik A. Lilleskov, Timothy J. Fahey, Thomas R. Horton, Gary M. Lovett, belowground ectomycorrhizal fungal community change over a nitrogen deposition gradient in alaska, ecological society of america, 2002. 32
  • 33. 33