DNA POLYMERASE
By- Robin Singh
CONTENT
 WHAT IS DNA POLYMERASE
 HISTORY
 FUNCTION
 STRUCTURE
DNA POLYMERASE
■ DNA polymerase is an enzymethat
synthesizes DNA molecules from deoxyribonucleotides, the
building blocks of DNA.
■ These enzymes are essential for DNA replication and usually
work in pairs to create two identical DNA strands from a single
original DNA molecule.
■ During this process, DNA polymerase "reads" the existing DNA
strands to create two new strands that match the existing ones.
■ DNA polymerase adds nucleotides to the three prime (3')-end of
a DNA strand, one nucleotide at a time.
HISTORY
 In 1956, Arthur Kornberg and colleagues discovered DNA polymerase I (Pol I), in Escherichia coli.
 They described the DNA replication process by which DNA polymerase copies the base sequence of a
template DNA strand.
 Kornberg was later awarded the Nobel Prize in Physiology or Medicine in 1959 for this work.
 DNA polymerase II was also discovered by Thomas Kornberg (the son of Arthur Kornberg) and
Malcolm E. Gefter in 1970 while further elucidating the role of Pol I in E. coli DNA replication
FUNCTION
 to synthesize DNA from deoxyribonucleotides, the building blocks of
DNA.
 adds new, free nucleotides to the 3’ end of the newly-forming strand,
elongating it in a 5’ to 3’direction.
 DNA polymerase corrects the mistakes in the newly-synthesized DNA
by proofreading the newly-made strands.
 When an incorrect coupling is recognized, the DNApolymerase
reverses its direction by one base pair of DNA.
 he incorrect base pair is then excised and DNA polymerase tries to re-
insert the correct nucleotide before continuing forwards.
DNA POLYMERASE STRUCTURE
• The known DNA polymerases have highly conserved structure, which means that their overall
catalytic subunits vary very little from species to species, independent of their domain
structures.
• Conserved structures usually indicate important, irreplaceable functions of the cell, the
maintenance of which provides evolutionary advantages.
• The shape can be described as resembling a right hand with thumb, finger, and palm
domains.
• The palm domain appears to function in catalyzing the transfer of phosphoryl groups in the
phosphoryl transfer reaction. DNA is bound to the palm when the enzyme is active.
• The finger domain functions to bind the nucleoside triphosphates with the template base.
• The thumb domain plays a potential role in the processivity, translocation, and positioning of
the DNA.
Family Types of DNA polymerase Species Examples
A
Replicative and Repair
Polymerases
Eukaryotic and Prokaryotic
T7 DNA polymerase, Pol I, and
DNA Polymerase γ
B
Replicative and Repair
Polymerases
Eukaryotic and Prokaryotic Pol II, Pol B, Pol ζ, Pol α, δ, and
ε
C Replicative Polymerases Prokaryotic Pol III
D Replicative Polymerases Euryarchaeota Not well-characterized
X
Replicative and Repair
Polymerases
Eukaryotic
Pol β, Pol σ, Pol λ, Pol μ,
and Terminal
deoxynucleotidyl transferase
Y
Replicative and Repair
Polymerases
Eukaryotic and Prokaryotic Pol ι
[
(
1
i
5
o
]
ta),Pol κ (kappa), Pol η
(eta), Pol IV, and Pol V
RT
Replicative and Repair
Polymerases
Viruses, Retroviruses, and
Eukaryotic
Telomerase, Hepatitis B virus
 Dna polymerase
 Dna polymerase
 Dna polymerase

Dna polymerase

  • 1.
  • 2.
    CONTENT  WHAT ISDNA POLYMERASE  HISTORY  FUNCTION  STRUCTURE
  • 3.
    DNA POLYMERASE ■ DNApolymerase is an enzymethat synthesizes DNA molecules from deoxyribonucleotides, the building blocks of DNA. ■ These enzymes are essential for DNA replication and usually work in pairs to create two identical DNA strands from a single original DNA molecule. ■ During this process, DNA polymerase "reads" the existing DNA strands to create two new strands that match the existing ones. ■ DNA polymerase adds nucleotides to the three prime (3')-end of a DNA strand, one nucleotide at a time.
  • 4.
    HISTORY  In 1956,Arthur Kornberg and colleagues discovered DNA polymerase I (Pol I), in Escherichia coli.  They described the DNA replication process by which DNA polymerase copies the base sequence of a template DNA strand.  Kornberg was later awarded the Nobel Prize in Physiology or Medicine in 1959 for this work.  DNA polymerase II was also discovered by Thomas Kornberg (the son of Arthur Kornberg) and Malcolm E. Gefter in 1970 while further elucidating the role of Pol I in E. coli DNA replication
  • 5.
    FUNCTION  to synthesizeDNA from deoxyribonucleotides, the building blocks of DNA.  adds new, free nucleotides to the 3’ end of the newly-forming strand, elongating it in a 5’ to 3’direction.  DNA polymerase corrects the mistakes in the newly-synthesized DNA by proofreading the newly-made strands.  When an incorrect coupling is recognized, the DNApolymerase reverses its direction by one base pair of DNA.  he incorrect base pair is then excised and DNA polymerase tries to re- insert the correct nucleotide before continuing forwards.
  • 6.
    DNA POLYMERASE STRUCTURE •The known DNA polymerases have highly conserved structure, which means that their overall catalytic subunits vary very little from species to species, independent of their domain structures. • Conserved structures usually indicate important, irreplaceable functions of the cell, the maintenance of which provides evolutionary advantages. • The shape can be described as resembling a right hand with thumb, finger, and palm domains. • The palm domain appears to function in catalyzing the transfer of phosphoryl groups in the phosphoryl transfer reaction. DNA is bound to the palm when the enzyme is active. • The finger domain functions to bind the nucleoside triphosphates with the template base. • The thumb domain plays a potential role in the processivity, translocation, and positioning of the DNA.
  • 8.
    Family Types ofDNA polymerase Species Examples A Replicative and Repair Polymerases Eukaryotic and Prokaryotic T7 DNA polymerase, Pol I, and DNA Polymerase γ B Replicative and Repair Polymerases Eukaryotic and Prokaryotic Pol II, Pol B, Pol ζ, Pol α, δ, and ε C Replicative Polymerases Prokaryotic Pol III D Replicative Polymerases Euryarchaeota Not well-characterized X Replicative and Repair Polymerases Eukaryotic Pol β, Pol σ, Pol λ, Pol μ, and Terminal deoxynucleotidyl transferase Y Replicative and Repair Polymerases Eukaryotic and Prokaryotic Pol ι [ ( 1 i 5 o ] ta),Pol κ (kappa), Pol η (eta), Pol IV, and Pol V RT Replicative and Repair Polymerases Viruses, Retroviruses, and Eukaryotic Telomerase, Hepatitis B virus