Submitted To: Submitted By:
SOS in Biotechnology Deepti Maheshwari
JIWAJI UNIVERSITY
DNA DAMAGEDNA DAMAGE
ANDAND
REPAIR MECHANISMREPAIR MECHANISM
CONTENTS:
Introduction
Structure of DNA
DNA Damage
DNA Repair
INTRODUCTION
DNA makes up the genetic material in
prokaryotes, eukaryotes and some viruses
also.
 It is the ultimate source of biological information.
The shapes and activities of individual cells are, to
a large extent, determined by genetic instructions
contained in DNA.
They carry the information in the form that can be
passed from one generation to another.
STRUCTURE OF DNA:
It is an event that introduces a deviation from the
usual double-helical structure of DNA.
DNA DAMAGE:
 Single Base Changes Structural Changes
DNA damage can lead to :
•Conversion of one base to another
•Affect the DNA sequence.
•Does not interferes with the process
of replication or transcription and
translation
•E.g.(a) Deamination of cytosine to
uracil
(b) Insertion of adenine in place
of cytosine.
•Change in the structure of
DNA occurs.
•Physical impediment to the
process of replication or
transcription.
E.g.(a) Formation of thymine
dimers.
(b) Methylation of a
base.
FIG: (A ) Mismatched base pairing
between U and G
FIG: (B ) Mismatched base pairing
between A and G
Cause : NITROUS ACID, causes
oxidative deamination of the
amino groups in cytosine.
Cause: REPLICATION ERROR
which inserts adenine in place of
cytosine.
EXAMPLES OF SINGLE BASE CHANGES IN DNA:
EXAMPLES OF STRUCTURAL CHANGES IN DNA:
FIG: (A ) Dimer formation between
adjacent thymine dimers
FIG: (B) Addition of methyl group
to guanine
Cause :UV IRRADIATION causes
dimers which blocks the
replication process.
Cause : ALKALYTING AGENTS
causes methylation of guanine.
DNA REPAIR:
Injury to DNA is minimized by DNA repair systems
that recognize and correct the damage.
In Escherichia coli , following type of DNA repair
mechanisms exist:
1.) Mismatch repair mechanism
2.) Nucleotide-excision repair mechanism
3.) Base-excision repair mechanism
1.) Mismatch repair mechanism:
Fig: Early steps of
methyl-directed
mismatch
repair.
Fig: Completing methyl-directed mismatch repair.
3’
3’
3’
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3’
3’
3’
3’
5’
5’
5’
5’
5’
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2.) Nucleotide-excision repair mechanism:
3.) Base-excision repair mechanism:
REFRENCES:
GENES VII by Benjamin Lewin
(page no. 447-453)
Principles Of Biochemistry (4th
edition) by
David L. Nelson and Michael M. Cox
(page no. 966-975)
Principles Of Genetics (6th
edition) by D. Peter
Snustad and Michael J. Simmons
(page no. 347-350)
DNA damage and repair mechanism

DNA damage and repair mechanism

  • 1.
    Submitted To: SubmittedBy: SOS in Biotechnology Deepti Maheshwari JIWAJI UNIVERSITY DNA DAMAGEDNA DAMAGE ANDAND REPAIR MECHANISMREPAIR MECHANISM
  • 2.
  • 3.
    INTRODUCTION DNA makes upthe genetic material in prokaryotes, eukaryotes and some viruses also.  It is the ultimate source of biological information. The shapes and activities of individual cells are, to a large extent, determined by genetic instructions contained in DNA. They carry the information in the form that can be passed from one generation to another.
  • 4.
  • 5.
    It is anevent that introduces a deviation from the usual double-helical structure of DNA. DNA DAMAGE:  Single Base Changes Structural Changes DNA damage can lead to : •Conversion of one base to another •Affect the DNA sequence. •Does not interferes with the process of replication or transcription and translation •E.g.(a) Deamination of cytosine to uracil (b) Insertion of adenine in place of cytosine. •Change in the structure of DNA occurs. •Physical impediment to the process of replication or transcription. E.g.(a) Formation of thymine dimers. (b) Methylation of a base.
  • 6.
    FIG: (A )Mismatched base pairing between U and G FIG: (B ) Mismatched base pairing between A and G Cause : NITROUS ACID, causes oxidative deamination of the amino groups in cytosine. Cause: REPLICATION ERROR which inserts adenine in place of cytosine. EXAMPLES OF SINGLE BASE CHANGES IN DNA:
  • 7.
    EXAMPLES OF STRUCTURALCHANGES IN DNA: FIG: (A ) Dimer formation between adjacent thymine dimers FIG: (B) Addition of methyl group to guanine Cause :UV IRRADIATION causes dimers which blocks the replication process. Cause : ALKALYTING AGENTS causes methylation of guanine.
  • 8.
    DNA REPAIR: Injury toDNA is minimized by DNA repair systems that recognize and correct the damage. In Escherichia coli , following type of DNA repair mechanisms exist: 1.) Mismatch repair mechanism 2.) Nucleotide-excision repair mechanism 3.) Base-excision repair mechanism
  • 9.
    1.) Mismatch repairmechanism: Fig: Early steps of methyl-directed mismatch repair.
  • 10.
    Fig: Completing methyl-directedmismatch repair. 3’ 3’ 3’ 3’ 3’ 3’ 3’ 3’ 3’ 3’ 3’ 3’ 5’ 5’ 5’ 5’ 5’ 5’ 5’ 5’ 5’ 5’ 5’ 5’
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    REFRENCES: GENES VII byBenjamin Lewin (page no. 447-453) Principles Of Biochemistry (4th edition) by David L. Nelson and Michael M. Cox (page no. 966-975) Principles Of Genetics (6th edition) by D. Peter Snustad and Michael J. Simmons (page no. 347-350)