Solid organ fabrication is an ultimate goal of Regenerative Medicine. Since the introduction of Tissue Engineering in 1993, significant advancements have been made to regenerate in vitro culture or tissue platforms. Relatively simple flat or tubular organs are already in (pre)clinical trials .
There are two emerging technologies for solid organ fabrication.
One is decellularization of cadaveric organs followed by repopulation with terminally differentiated or progenitor cells.
The other is 3D bioprinting to deposit cell-laden bio-inks to attain complex tissue architecture.
A remarkable combination of artificial intelligence (AI) and biology has produced the world's first "living robots.
Researchers in the US have created the first living machines by assembling cells from African clawed frogs into tiny robots that move around under their own steam.
Using stem cells scraped from frog embryos, researchers from the University of Vermont (UVM) and Tufts University assembled "xenobots."
They're neither a traditional robot nor a known species of animal. It's a new class of artifact: a living, programmable organism
Biology, genetics, nanotechnology, neuroscience, materials science, biotech, ...Brian Russell
Over the past two years I've done a lot of interesting research which I've decided to aggregate. My research pertains to the following: Biology, Genetics, Nanotechnology, Neuroscience, Materials Science, Biotechnology, Chemical Engineering, All Things 3-D, Super Computing, Quantum Physics, Energy, Design, & Sustainability.
A remarkable combination of artificial intelligence (AI) and biology has produced the world's first "living robots.
Researchers in the US have created the first living machines by assembling cells from African clawed frogs into tiny robots that move around under their own steam.
Using stem cells scraped from frog embryos, researchers from the University of Vermont (UVM) and Tufts University assembled "xenobots."
They're neither a traditional robot nor a known species of animal. It's a new class of artifact: a living, programmable organism
Biology, genetics, nanotechnology, neuroscience, materials science, biotech, ...Brian Russell
Over the past two years I've done a lot of interesting research which I've decided to aggregate. My research pertains to the following: Biology, Genetics, Nanotechnology, Neuroscience, Materials Science, Biotechnology, Chemical Engineering, All Things 3-D, Super Computing, Quantum Physics, Energy, Design, & Sustainability.
Stem cells for artificial organ regenerationElvis Samuel
A stem cell is a cell with the unique ability to develop into specialized cell types in the body. This presentation details the regeneration of artificial organs using stem cells
This presentation deals with stem cell therapy & new avenues in stem cell therapy. It also discusses latest advances such as treatment against baldness, multiple sclerosis, type 1 diabetes, spinal cord injury, demyelinating diseases, deafness, eye, Parkinson's disease. Also discusses about umbilical cord stem cells and finally clinical trials without patients (organs on chips).
This slide explains the various basic aspect of animal cell culture, cell line and cell strain, initiation and maintenance of primary cell culture, characteristic of primary cell culture and their applications. It also contains MCQs for practice.
Stem cells for artificial organ regenerationElvis Samuel
A stem cell is a cell with the unique ability to develop into specialized cell types in the body. This presentation details the regeneration of artificial organs using stem cells
This presentation deals with stem cell therapy & new avenues in stem cell therapy. It also discusses latest advances such as treatment against baldness, multiple sclerosis, type 1 diabetes, spinal cord injury, demyelinating diseases, deafness, eye, Parkinson's disease. Also discusses about umbilical cord stem cells and finally clinical trials without patients (organs on chips).
This slide explains the various basic aspect of animal cell culture, cell line and cell strain, initiation and maintenance of primary cell culture, characteristic of primary cell culture and their applications. It also contains MCQs for practice.
This is my short presentation in one of my university classes. It's obvious that the future of the stem cell biology is tightly engaged with organoids and they will absolutely change the way science is going to.
Kind regards
Shahin Ahmadian
Stem Cells and Tissue Engineering: past, present and futureAna Rita Ramos
Tissue engineering brings together the principles of the life sciences and medicine with engineering. New biomaterials; advances in genomics and proteomics and increased understanding of healing processes contributed to the increase of this area over the past decade.
Stem cell biology is paving the way for the generation of unlimited cells of specific phenotypes for incorporation
into engineered tissue constructs.
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
This presentation explores a brief idea about the structural and functional attributes of nucleotides, the structure and function of genetic materials along with the impact of UV rays and pH upon them.
2. Content
• Regenerative medicine
• Areas of Regenerative Medicine
• Introduction
• Extra Cellular Matrix
• Objectives
• Decellularization
• Approaches in the field
• Accomplished To Date
• Pro & cons
• Hurdles
• Conclusion
• Bibliography
3. Characterizing
• Regenerative Medicine : Regenerative medicine is a broad
definition for innovative medical therapies that will enable the
body to repair, replace, restore and regenerate damaged or
diseased cells, tissues and organs.
2. Tools and Procedures :
• Tissue Engineering: Tissue Repair/Replacement and Lab
Grown Organs
• Technologies
a. Stem cells
b. Natural and Synthetic Scaffolds
c. 3-D Printing and Chip Technologies
4. Areas of Regenerative Medicine
1. Artificial Organs: Medical Devices (Lab Grown
Bladder)
2.Tissue Engineering & Biomaterials Scaffolds
5. Areas of Regenerative Medicine
3. Cellular Therapies
• Use of Stem Cells (From Patient)
• Development of Regenerative Medicine Treatments.
• Enhance Regeneration of Tissues and Organs.
4. Clinical Trials
• Many Currently in Progress.
• NIH and Private Organizations.
6. Introduction
• Solid organ fabrication is an ultimate goal of
Regenerative Medicine. Since the introduction of
Tissue Engineering in 1993, significant advancements
have been made to regenerate in vitro culture or
tissue platforms. Relatively simple flat or tubular
organs are already in (pre)clinical trials .
• There are two emerging technologies for solid organ
fabrication.
1. One is decellularization of cadaveric organs
followed by repopulation with terminally
differentiated or progenitor cells.
2. The other is 3D bioprinting to deposit cell-laden
bio-inks to attain complex tissue architecture.
7. People Die Every Year
Sales
Coronary heart failure
Chronic lung diseases
Kidney failure
Liver diseases
8. Treatments For Organ Failure
• 1) Frequent Treatment
Allogeneic organ transplantation
Xenogeneic organ transplantation
Artificial organs
• Disadvantages
1. Scarcity of donors
2. Body immune response
3. Thrombogenicity
11. Extra Cellular Matrix
• Framework for cell
binding and organ
formation
• Made of
proteins,glycoproteins ,
proteoglycans
• Signals for cell growth&
proliferate
• Supports cell adhesion
migrations differation and
proliferate.
13. Decellularization
• It began with great promise to regenerate cadaveric
organs while overcoming transplant rejection and
possibly alleviating perpetual shortage of donated
organs.
• It can be done with organs harvested from pigs or
newly dead organs.
14. • Cells in these organs are stripped away through
decellularzation process.
• Scientist wash the cell away with the help of a special
detergent and chemicals to wash away its DNA, lipids
,soluble proteins ,sugar and other cellular material .
• After washing we are left with scaffold of original
tissue .
15. • The sterile scaffold is then seeded with stem cells
taken from patient ie progenitor cells
• The stem cells are preprogrammed to become
specialized cell depending upon the organ.
• All this process helps the patient to avoid the risk if
rejection by the recipient immune response.
18. Building Scaffolds
• Utilizing xenogeneic or non-transplantable organs as
scaffolds for re-building tissues with stem cells
19. What it does to build a solid organ
A scaffold
• Biologic
(ecm)
• Synthetic
• Bioprinting
Billions of cells
• Bone marrow
• Blood
• iPS cells
• ES cells2+
Ability to put it
together
• Pump
function
• Metabolism
• physiology
21. Approaches in the field
• Haralad C ott et. al .(2008)perfusion decelluarized
matrix using natures platform to engineer a
Bioartificial heart ie rat heart.
Perfusion decellularization with
different detergents
1% PEG
After 12 hrs
1% Triton X-100
After 12 hrs
1% SDS
After 12 hrs best result
22. Approaches in the field
• Haralad C ott et. al .(2008)perfusion decelluarized
matrix using natures platform to engineer a
bioartificial heart ie rat heart.
Recellularization with endothelial
cells after 7 days
• 550.7 ± 99.0 endothelial
cells/mm2 on the endocardial
surface
• 264.8 ± 49.2 endothelial
cells/mm2 within the vascular tree
Recellularization with neonatal
cardiomyoctes
• After 8 days the heart s showed
contructs and electric responses (
2% of adult rat heart function
23. Approaches in the field
• Jeremy J Song et al(2013) Regeneration &
experimental orthotopic transplantation of a
bioengineered kidney.
Perfusion decellularization with SDS
detergent for 12 hrs
Reseeding with 50 ×106 epithelial cells
Orthotopic transplantation and urine
production
24. Accomplished To Date
Whole Heart Decellularization
• Designing a bioreactor
• Minimizing the total decellularization time to
time to 1 day and SDS contact time for 4 hrs
procine hearts.
25. Accomplished To Date
• Arota Decllularization / Recellularization Bioreactor
• Porcine Aortic Endothelial Cell Culture
30. Pro’s & Con’s
• Pro’s
1. Most nature simulating scaffolds in terms of
composition & mechanical properties
• Con’s
1. Inhomogeneous distribution of cells
2. Difficulty in retaining all ECM
3. Immunogenicity upon incomplete Decellularization
Preferred application : tissue with high ECM content
load bearing tissue.
31. Hurdles
• Organ complexity Atria, Ventricle, Pacemaker,
Neurons, Fibroblasts, Stem cells
• Billions of cells at an affordable cost
• Once we have cells … organ potency
• Longevity – years and years
• Endogenous responsively/repair
• Physiologic response Progenitor cells Cardiac stem
cells Endothelial cardiomyocytes Smooth muscle cells
Numbers Types
32. Conclusions
• The unmet need is organs for transplant
• dECM provides optimal advantages as a scaffold
• The door is open for complex human organ
engineering
• Regenerative medicine is coming of age
• The rate- limiting step is CELLS
33. References
• Decellularized Tissue Engineering
• Repopulation of decellularized whole organ scaffold
using stem cells: an emerging technology for the
development of neo-organ
• Perfusion decellularization of whole organs.
• Bioartificial Heart: A Human-Sized Porcine Model –
The Way Ahead
• Perfusion-decellularized matrix: using nature's
platform to engineer a bioartificial heart
Harald C Ott1, Thomas S Matthiesen2, Saik-Kia Goh2,
Lauren D Black3, Stefan M Kren2, Theoden I Netoff3 &
Doris A Taylor2,4