This document discusses various types of anaerobic respiration. It describes how anaerobic respiration works using electron acceptors other than oxygen, such as nitrates, sulfates, or carbon dioxide. It then examines different forms of anaerobic respiration in more detail, including denitrification, sulfate reduction, and sulfur disproportionation. Key enzymes and pathways involved in nitrate reduction, sulfate reduction, and other processes are outlined.
nitrate and sulfate reduction ; methanogenesis and acetogenesisjyoti arora
this presentation includes following topics in brief:
1. nitrate assimilatory reduction
2. sulfate assimilatoery reduction
3. methanogenesis
4. acetogenesis
The document summarizes the sulfur and iron cycles and the key roles of microorganisms in these cycles. Photosynthetic and chemolithoautotrophic microorganisms transform sulfur compounds. Sulfate-reducing bacteria use sulfate as an electron acceptor to form sulfide. Minor sulfur compounds like DMSP also play important roles. Abiotic processes like sulfide oxidation can also occur under certain conditions. In the iron cycle, microbes catalyze the oxidation of ferrous iron to ferric iron and vice versa through respiration. Magnetotactic bacteria biomineralize magnetic minerals like magnetite.
This document discusses hydrocarbon bioremediation. It defines hydrocarbons and explains that they are readily degraded by microorganisms under aerobic conditions. Both bacteria and fungi can aerobically degrade alkenes, alkanes, and aromatic hydrocarbons through different metabolic pathways. While aerobic degradation is faster, some microbes can also anaerobically degrade hydrocarbons through pathways like fumarate addition, oxygen-independent hydroxylation, and carboxylation. The document concludes that bioremediation removes hydrocarbons that are environmental pollutants and contribute to health and climate issues.
Methanogenesis or biomethanation is the formation of methane by microbes known as methanogens. Organisms capable of producing methane have been identified only from the domain Archaea, a group phylogenetically distinct from both eukaryotes and bacteria, although many live in close association with anaerobic bacteria.
This document discusses biological nitrogen fixation, which is responsible for 65% of nitrogen used by humans through food. It occurs through nitrogen-fixing bacteria, which can be free-living like Azotobacter or symbiotic like Rhizobium that form nodules on legume roots. The bacteria contain the enzyme nitrogenase, which converts atmospheric nitrogen gas into ammonia in an oxygen-free environment within the nodules. The ammonia is then assimilated into amino acids and other biomolecules through a series of reactions.
Oxidative phosphorylation and photophosphorylation are two pathways that generate ATP through electron transport chains located in mitochondria and chloroplasts respectively. Both pathways use proton gradients generated by electron transport to power ATP synthase and produce ATP. In mitochondria, electrons from NADH and FADH2 enter the electron transport chain at Complex I and II and are passed through a series of carriers including ubiquinone, cytochromes, and Complexes III and IV until they reduce oxygen to water. This electron flow is coupled to the pumping of protons out of the mitochondrial matrix, generating a proton gradient used by ATP synthase to produce ATP.
This PPT is meant for undergraduate students to clear the concepts of Microbial metabolism.
The presentation includes the basics of catabolism and anabolism
This document discusses various types of anaerobic respiration. It describes how anaerobic respiration works using electron acceptors other than oxygen, such as nitrates, sulfates, or carbon dioxide. It then examines different forms of anaerobic respiration in more detail, including denitrification, sulfate reduction, and sulfur disproportionation. Key enzymes and pathways involved in nitrate reduction, sulfate reduction, and other processes are outlined.
nitrate and sulfate reduction ; methanogenesis and acetogenesisjyoti arora
this presentation includes following topics in brief:
1. nitrate assimilatory reduction
2. sulfate assimilatoery reduction
3. methanogenesis
4. acetogenesis
The document summarizes the sulfur and iron cycles and the key roles of microorganisms in these cycles. Photosynthetic and chemolithoautotrophic microorganisms transform sulfur compounds. Sulfate-reducing bacteria use sulfate as an electron acceptor to form sulfide. Minor sulfur compounds like DMSP also play important roles. Abiotic processes like sulfide oxidation can also occur under certain conditions. In the iron cycle, microbes catalyze the oxidation of ferrous iron to ferric iron and vice versa through respiration. Magnetotactic bacteria biomineralize magnetic minerals like magnetite.
This document discusses hydrocarbon bioremediation. It defines hydrocarbons and explains that they are readily degraded by microorganisms under aerobic conditions. Both bacteria and fungi can aerobically degrade alkenes, alkanes, and aromatic hydrocarbons through different metabolic pathways. While aerobic degradation is faster, some microbes can also anaerobically degrade hydrocarbons through pathways like fumarate addition, oxygen-independent hydroxylation, and carboxylation. The document concludes that bioremediation removes hydrocarbons that are environmental pollutants and contribute to health and climate issues.
Methanogenesis or biomethanation is the formation of methane by microbes known as methanogens. Organisms capable of producing methane have been identified only from the domain Archaea, a group phylogenetically distinct from both eukaryotes and bacteria, although many live in close association with anaerobic bacteria.
This document discusses biological nitrogen fixation, which is responsible for 65% of nitrogen used by humans through food. It occurs through nitrogen-fixing bacteria, which can be free-living like Azotobacter or symbiotic like Rhizobium that form nodules on legume roots. The bacteria contain the enzyme nitrogenase, which converts atmospheric nitrogen gas into ammonia in an oxygen-free environment within the nodules. The ammonia is then assimilated into amino acids and other biomolecules through a series of reactions.
Oxidative phosphorylation and photophosphorylation are two pathways that generate ATP through electron transport chains located in mitochondria and chloroplasts respectively. Both pathways use proton gradients generated by electron transport to power ATP synthase and produce ATP. In mitochondria, electrons from NADH and FADH2 enter the electron transport chain at Complex I and II and are passed through a series of carriers including ubiquinone, cytochromes, and Complexes III and IV until they reduce oxygen to water. This electron flow is coupled to the pumping of protons out of the mitochondrial matrix, generating a proton gradient used by ATP synthase to produce ATP.
This PPT is meant for undergraduate students to clear the concepts of Microbial metabolism.
The presentation includes the basics of catabolism and anabolism
Methanogenesis is the biological production of methane through two pathways. It is carried out by methanogenic archaea under strictly anaerobic conditions. These archaea use one-carbon compounds like carbon dioxide, methanol, or methylamines as substrates. They reduce these substrates using coenzymes like coenzyme M, coenzyme F420, methanofuran, and tetrahydromethanopterin to produce methane as the end product through a series of reduction steps. Methanogenesis provides an important source of energy for the methanogenic archaea in environments like wetlands, digestive systems, and anaerobic digesters.
Here are the answers to the questions:
1. Nitrogen is present in the form of N2 gas in the atmosphere.
2. The enzyme nitrogenase is responsible for splitting the triple N≡N bond in nitrogen fixation.
3. The Haber process is used in chemical nitrogen fixation to convert nitrogen gas to ammonia at high pressure and temperature.
4. A nodulated symbiosis is the formation of nodules in leguminous plants by Rhizobium bacteria, for example Rhizobium and chickpea.
Isolation of phosphate solubilizing bacteria (PSB) from soil Likhith KLIKHITHK1
A number of bacterial species provide beneficial effects to a plant and these are mostly present in rhizosphere and hence called rhizobacteria. This group of bacteria has been termed plant growth promoting rhizobacteria. Phosphorus is an essential element for plant development and growth making up about 0.2 % of plant dry weight. Plants acquire P from soil solution as phosphate anions. However, phosphate anions are extremely reactive and may be immobilized through precipitation with cations such as Ca 2+ , Mg 2+ , Fe 3+ and Al 3+. In these forms, P is highly insoluble and unavailable to plants. Different bacterial species has ability to solubilize insoluble inorganic phosphate compounds, such as tricalcium phosphate, di calcium phosphate, hydroxyapatite, and rock phosphate to soluble form, Hence theses bacteria's are referred to as phosphate solubilizing bacteria.
Nitrogen fixation is the process by which nitrogen is converted from its stable dinitrogen form in the atmosphere into ammonia. This process is essential because plants cannot use atmospheric nitrogen. It is carried out by nitrogen-fixing bacteria that contain the nitrogenase enzyme complex. There are two types of biological nitrogen fixation - symbiotic fixation occurs through root nodules in legumes formed via their association with Rhizobia bacteria, and asymbiotic fixation by free-living bacteria and cyanobacteria in soil. Nitrogen fixation requires a large amount of energy, so it is tightly regulated by various mechanisms at the genetic level and through feedback inhibition when fixed nitrogen is abundant.
This document summarizes nitrogen-fixing microorganisms. It discusses how biological nitrogen fixation is carried out by prokaryotes, either symbiotically within plant nodules like Rhizobia bacteria with legumes, or as free-living soil microbes like Azotobacter. A hierarchy of controls on nitrogen fixation is described from the genetic to ecosystem levels. Symbiotic nitrogen fixation provides a source of fixed nitrogen for plants in exchange for carbon from photosynthesis.
This document discusses chemolithotrophs, which are organisms that obtain energy from oxidizing inorganic or organic compounds. It notes that chemolithotrophs, also called chemolithoautotrophs, were first studied by Sergei Winogradsky in sulfur bacteria. Chemolithotrophs face challenges due to the lower energy availability from oxidizing inorganic compounds compared to organics, and solutions include oxidizing more substrate and using reverse electron flow. The document categorizes chemolithotrophs as aerobic, using oxygen as the terminal electron acceptor, or anaerobic, using other compounds besides oxygen.
Bioleaching is a process that uses microorganisms like bacteria and fungi to extract metals from ores. It involves microbes transforming metal compounds into soluble forms that can then be recovered. Some key microbes used are Thiobacillus ferrooxidans and Thiobacillus thiooxidans, which produce acids that dissolve metals. Bioleaching is commercially done through methods like slope leaching, heap leaching, and in situ leaching. It provides a cost-effective way to extract low-grade ores and is more environmentally friendly than smelting. However, it is a slower process and requires careful control of temperature, pH, and other environmental factors.
Cyanobacteria, algae, and plants perform oxygenic photosynthesis using chlorophyll. There are two photosystems - photosystem I and photosystem II - that work together in a Z-scheme to transfer electrons. Photosystem I absorbs longer wavelengths of light at 700nm via P700 chlorophyll while photosystem II absorbs shorter wavelengths at 680nm via P680 chlorophyll. Electrons are transferred between the photosystems through a series of electron carriers to generate ATP in cyclic or non-cyclic photophosphorylation, with the latter process also using photosystem II to split water and produce oxygen.
Introduction
Type of pesticides
Advantage & disadvantages of pesticides
Degradation of pesticide
Microbial degradation of pesticides
Mode of microbial metabolism of pesticides
Strategies for biodegradation
Approaches for biodegradation of pesticide
Chemical reaction leading biodegradation of pesticide
Metabolism of pesticides by MO
Metabolism of DDT
This document discusses sulfur-oxidizing bacteria and their chemolithotrophic metabolism. It provides details on various sulfur-oxidizing bacteria such as Beggiatoa, Thiobacillus, Sulfolobus, and Thiomicrospira. It explains that these bacteria are able to use reduced inorganic sulfur compounds like hydrogen sulfide as electron donors to generate energy through electron transport phosphorylation. The oxidation of these compounds produces sulfuric acid. It also notes that while most sulfur oxidation is aerobic, some bacteria can perform this process anaerobically using nitrate as the terminal electron acceptor.
This document provides information about green sulfur bacteria. It discusses their:
1. Scientific classification, which places them in the domain Bacteria, phylum Chlorobiota, class 'Chlorobia', and order chlorobiales.
2. Characteristics, including being gram-negative, rod or spherical shaped, and using light energy and reduced sulfur compounds for photosynthesis.
3. Habitat in aquatic environments like hot springs, stratified lakes, and marine habitats where they require anaerobic conditions and reduced sulfur.
biological nitrogen fixation, which is carried out by diazotrophs, has been dealt with in this slideshare. it involves the mechanism involved and various factors involved therein.
This document discusses plant growth promoting rhizobacteria (PGPR) and their ability to solubilize inorganic phosphate. Some key points:
- PGPR are bacteria that live in the rhizosphere and provide benefits to plants. An important function is solubilizing insoluble phosphate minerals making phosphorus available for plant uptake.
- Common insoluble phosphates include tricalcium phosphate, dicalcium phosphate, and hydroxyapatite. Bacteria secrete organic acids like lactic acid and acetic acid to solubilize these minerals.
- Successful phosphate solubilizing bacteria include species from Bacillus, Pseudomonas, and Rhizobium genera. Screening methods involve checking for clearing zones
Cyclic and non cyclic photophosphorilationSunidhi Shreya
Cyclic and non-cyclic photophosphorylation are two types of photophosphorylation involved in photosynthesis. Non-cyclic photophosphorylation involves both photosystem I and II and uses electrons from the splitting of water, producing oxygen as a byproduct. Cyclic photophosphorylation only involves photosystem I and cycles electrons back without splitting water or producing oxygen. Both mechanisms use the electron transport chain to produce ATP, but only non-cyclic photophosphorylation produces NADPH in addition to ATP.
The biological conversion of atmospheric nitrogen to ammonia take place with the help of an enzyme called nitrogenase. This enzyme is anaerobic in nature. This nitrogenase enzyme is made up of a larger subunit and a smaller subunit.
Lignocelluloses, the major component of biomass, makes up about half of the matter produced by photosynthesis. It consists of three types of polymers – cellulose, hemicellulose, and lignin – that are strongly intermeshed and chemically bonded by non-covalent forces and by covalent cross-linkages. A great variety of fungi and bacteria can fragment these macromolecules by using a battery of hydrolytic or oxidative enzymes. In native substrates, binding of the polymers hinders their biodegradation. Molecular genetics of cellulose-, hemicellulose- and lignin-degrading systems advanced considerably during the 1990s. Most of the enzymes have been cloned, sequenced, and expressed both in homologous and in heterologous hosts. Much is known about the structure, genomic organization, and regulation of the genes encoding these proteins.
PHOSPHATE SOLUBILIZERS
INTRODUCTION
Phosphate SOLUBILIZERS are a group of beneficial micro-organisms capable of breaking down of organic and inorganic insoluble phosphorous compounds to soluble P form that can easily be assimilated by plants.
Phosphorous (P) is a major growth-limiting nutrient, Plants acquire phosphorus from soil solution as phosphate anion.
TYPES
MECHANISM
ISOLATION
INOCULANT PRODUCTION
INOCULANT APPLICATION
ROLE OF PHOSPHATE SOLUBILIZERS
This document summarizes the sulfur cycle. It explains that sulfur is an essential element found in proteins, amino acids, vitamins and enzymes that is important for plant and animal life. It goes through the major steps of the sulfur cycle, including the biological oxidation and reduction of elemental sulfur, assimilation of sulfate by plants, mineralization of organic sulfur sources, and oxidation and reduction of sulfide. The sulfur cycle is essential for transforming sulfur between different forms and transporting it through ecosystems.
Sulphate assimilation which takes place mainly in chloroplasts in higher plants leads to the formation of cysteine. cysteine is the central compound in sulphur assimilation.
This document provides information on sulfur metabolism in plants. It discusses sulfate uptake and transport, sulfur activation through ATP sulfurylase and APS kinase, and sulfate reduction via APS sulfotransferase. Key regulation points are the enzymes ATP sulfurylase, APS reductase, and serine acetyltransferase which can limit the pathways when overexpressed, leading to increased sulfur levels in plants. The document also outlines subcellular compartmentation of sulfur processes between the plasma membrane, cytoplasm and chloroplast.
Methanogenesis is the biological production of methane through two pathways. It is carried out by methanogenic archaea under strictly anaerobic conditions. These archaea use one-carbon compounds like carbon dioxide, methanol, or methylamines as substrates. They reduce these substrates using coenzymes like coenzyme M, coenzyme F420, methanofuran, and tetrahydromethanopterin to produce methane as the end product through a series of reduction steps. Methanogenesis provides an important source of energy for the methanogenic archaea in environments like wetlands, digestive systems, and anaerobic digesters.
Here are the answers to the questions:
1. Nitrogen is present in the form of N2 gas in the atmosphere.
2. The enzyme nitrogenase is responsible for splitting the triple N≡N bond in nitrogen fixation.
3. The Haber process is used in chemical nitrogen fixation to convert nitrogen gas to ammonia at high pressure and temperature.
4. A nodulated symbiosis is the formation of nodules in leguminous plants by Rhizobium bacteria, for example Rhizobium and chickpea.
Isolation of phosphate solubilizing bacteria (PSB) from soil Likhith KLIKHITHK1
A number of bacterial species provide beneficial effects to a plant and these are mostly present in rhizosphere and hence called rhizobacteria. This group of bacteria has been termed plant growth promoting rhizobacteria. Phosphorus is an essential element for plant development and growth making up about 0.2 % of plant dry weight. Plants acquire P from soil solution as phosphate anions. However, phosphate anions are extremely reactive and may be immobilized through precipitation with cations such as Ca 2+ , Mg 2+ , Fe 3+ and Al 3+. In these forms, P is highly insoluble and unavailable to plants. Different bacterial species has ability to solubilize insoluble inorganic phosphate compounds, such as tricalcium phosphate, di calcium phosphate, hydroxyapatite, and rock phosphate to soluble form, Hence theses bacteria's are referred to as phosphate solubilizing bacteria.
Nitrogen fixation is the process by which nitrogen is converted from its stable dinitrogen form in the atmosphere into ammonia. This process is essential because plants cannot use atmospheric nitrogen. It is carried out by nitrogen-fixing bacteria that contain the nitrogenase enzyme complex. There are two types of biological nitrogen fixation - symbiotic fixation occurs through root nodules in legumes formed via their association with Rhizobia bacteria, and asymbiotic fixation by free-living bacteria and cyanobacteria in soil. Nitrogen fixation requires a large amount of energy, so it is tightly regulated by various mechanisms at the genetic level and through feedback inhibition when fixed nitrogen is abundant.
This document summarizes nitrogen-fixing microorganisms. It discusses how biological nitrogen fixation is carried out by prokaryotes, either symbiotically within plant nodules like Rhizobia bacteria with legumes, or as free-living soil microbes like Azotobacter. A hierarchy of controls on nitrogen fixation is described from the genetic to ecosystem levels. Symbiotic nitrogen fixation provides a source of fixed nitrogen for plants in exchange for carbon from photosynthesis.
This document discusses chemolithotrophs, which are organisms that obtain energy from oxidizing inorganic or organic compounds. It notes that chemolithotrophs, also called chemolithoautotrophs, were first studied by Sergei Winogradsky in sulfur bacteria. Chemolithotrophs face challenges due to the lower energy availability from oxidizing inorganic compounds compared to organics, and solutions include oxidizing more substrate and using reverse electron flow. The document categorizes chemolithotrophs as aerobic, using oxygen as the terminal electron acceptor, or anaerobic, using other compounds besides oxygen.
Bioleaching is a process that uses microorganisms like bacteria and fungi to extract metals from ores. It involves microbes transforming metal compounds into soluble forms that can then be recovered. Some key microbes used are Thiobacillus ferrooxidans and Thiobacillus thiooxidans, which produce acids that dissolve metals. Bioleaching is commercially done through methods like slope leaching, heap leaching, and in situ leaching. It provides a cost-effective way to extract low-grade ores and is more environmentally friendly than smelting. However, it is a slower process and requires careful control of temperature, pH, and other environmental factors.
Cyanobacteria, algae, and plants perform oxygenic photosynthesis using chlorophyll. There are two photosystems - photosystem I and photosystem II - that work together in a Z-scheme to transfer electrons. Photosystem I absorbs longer wavelengths of light at 700nm via P700 chlorophyll while photosystem II absorbs shorter wavelengths at 680nm via P680 chlorophyll. Electrons are transferred between the photosystems through a series of electron carriers to generate ATP in cyclic or non-cyclic photophosphorylation, with the latter process also using photosystem II to split water and produce oxygen.
Introduction
Type of pesticides
Advantage & disadvantages of pesticides
Degradation of pesticide
Microbial degradation of pesticides
Mode of microbial metabolism of pesticides
Strategies for biodegradation
Approaches for biodegradation of pesticide
Chemical reaction leading biodegradation of pesticide
Metabolism of pesticides by MO
Metabolism of DDT
This document discusses sulfur-oxidizing bacteria and their chemolithotrophic metabolism. It provides details on various sulfur-oxidizing bacteria such as Beggiatoa, Thiobacillus, Sulfolobus, and Thiomicrospira. It explains that these bacteria are able to use reduced inorganic sulfur compounds like hydrogen sulfide as electron donors to generate energy through electron transport phosphorylation. The oxidation of these compounds produces sulfuric acid. It also notes that while most sulfur oxidation is aerobic, some bacteria can perform this process anaerobically using nitrate as the terminal electron acceptor.
This document provides information about green sulfur bacteria. It discusses their:
1. Scientific classification, which places them in the domain Bacteria, phylum Chlorobiota, class 'Chlorobia', and order chlorobiales.
2. Characteristics, including being gram-negative, rod or spherical shaped, and using light energy and reduced sulfur compounds for photosynthesis.
3. Habitat in aquatic environments like hot springs, stratified lakes, and marine habitats where they require anaerobic conditions and reduced sulfur.
biological nitrogen fixation, which is carried out by diazotrophs, has been dealt with in this slideshare. it involves the mechanism involved and various factors involved therein.
This document discusses plant growth promoting rhizobacteria (PGPR) and their ability to solubilize inorganic phosphate. Some key points:
- PGPR are bacteria that live in the rhizosphere and provide benefits to plants. An important function is solubilizing insoluble phosphate minerals making phosphorus available for plant uptake.
- Common insoluble phosphates include tricalcium phosphate, dicalcium phosphate, and hydroxyapatite. Bacteria secrete organic acids like lactic acid and acetic acid to solubilize these minerals.
- Successful phosphate solubilizing bacteria include species from Bacillus, Pseudomonas, and Rhizobium genera. Screening methods involve checking for clearing zones
Cyclic and non cyclic photophosphorilationSunidhi Shreya
Cyclic and non-cyclic photophosphorylation are two types of photophosphorylation involved in photosynthesis. Non-cyclic photophosphorylation involves both photosystem I and II and uses electrons from the splitting of water, producing oxygen as a byproduct. Cyclic photophosphorylation only involves photosystem I and cycles electrons back without splitting water or producing oxygen. Both mechanisms use the electron transport chain to produce ATP, but only non-cyclic photophosphorylation produces NADPH in addition to ATP.
The biological conversion of atmospheric nitrogen to ammonia take place with the help of an enzyme called nitrogenase. This enzyme is anaerobic in nature. This nitrogenase enzyme is made up of a larger subunit and a smaller subunit.
Lignocelluloses, the major component of biomass, makes up about half of the matter produced by photosynthesis. It consists of three types of polymers – cellulose, hemicellulose, and lignin – that are strongly intermeshed and chemically bonded by non-covalent forces and by covalent cross-linkages. A great variety of fungi and bacteria can fragment these macromolecules by using a battery of hydrolytic or oxidative enzymes. In native substrates, binding of the polymers hinders their biodegradation. Molecular genetics of cellulose-, hemicellulose- and lignin-degrading systems advanced considerably during the 1990s. Most of the enzymes have been cloned, sequenced, and expressed both in homologous and in heterologous hosts. Much is known about the structure, genomic organization, and regulation of the genes encoding these proteins.
PHOSPHATE SOLUBILIZERS
INTRODUCTION
Phosphate SOLUBILIZERS are a group of beneficial micro-organisms capable of breaking down of organic and inorganic insoluble phosphorous compounds to soluble P form that can easily be assimilated by plants.
Phosphorous (P) is a major growth-limiting nutrient, Plants acquire phosphorus from soil solution as phosphate anion.
TYPES
MECHANISM
ISOLATION
INOCULANT PRODUCTION
INOCULANT APPLICATION
ROLE OF PHOSPHATE SOLUBILIZERS
This document summarizes the sulfur cycle. It explains that sulfur is an essential element found in proteins, amino acids, vitamins and enzymes that is important for plant and animal life. It goes through the major steps of the sulfur cycle, including the biological oxidation and reduction of elemental sulfur, assimilation of sulfate by plants, mineralization of organic sulfur sources, and oxidation and reduction of sulfide. The sulfur cycle is essential for transforming sulfur between different forms and transporting it through ecosystems.
Sulphate assimilation which takes place mainly in chloroplasts in higher plants leads to the formation of cysteine. cysteine is the central compound in sulphur assimilation.
This document provides information on sulfur metabolism in plants. It discusses sulfate uptake and transport, sulfur activation through ATP sulfurylase and APS kinase, and sulfate reduction via APS sulfotransferase. Key regulation points are the enzymes ATP sulfurylase, APS reductase, and serine acetyltransferase which can limit the pathways when overexpressed, leading to increased sulfur levels in plants. The document also outlines subcellular compartmentation of sulfur processes between the plasma membrane, cytoplasm and chloroplast.
This document summarizes the sulfur cycle. It explains that sulfur is the 10th most abundant element in the earth's crust and is essential for plant and animal proteins, enzymes, amino acids and vitamins. The sulfur cycle involves the transformation of elemental sulfur into various forms including sulfate, sulfide and organic sulfur compounds. These transformations occur through biological and chemical processes like oxidation, reduction and assimilation. The cycle is essential for providing sulfur to living organisms and returning it to the environment and atmosphere.
This document summarizes the sulfur cycle. It explains that sulfur is the 10th most abundant element in the earth's crust and is essential for proteins, amino acids, vitamins and enzymes in plants and animals. The sulfur cycle involves the transformation of sulfur between its various forms, including elemental sulfur, sulfate, sulfide and organic sulfur compounds. As sulfur moves through this cycle, it is oxidized and reduced by bacteria and other organisms and plays an important role in biochemical processes before returning to the environment.
Sulphonamides are antibacterial agents that work by competitively inhibiting the enzyme dihydropteroate synthetase, blocking the bacterial synthesis of folic acid. They are structural analogues of para-aminobenzoic acid (PABA), which is involved in folic acid synthesis. The key features required for antibacterial activity include the sulphanilamide skeleton and amino and sulphonyl groups at the 1 and 4 positions on the benzene ring. While sulphonamides were historically important antibiotics, their use has decreased with the availability of other drugs such as penicillin that are often more effective.
1. Sulphonation metabolism- introduction, types of sulphate transferases, reactions, summary
2. EMT pathways explaining metastasis in cancer and molecular pathways
3. Thank you
1) Differentiate between dissimilatory and assimilatory sulphate red.pdfcalebstonekr78435
1) Differentiate between dissimilatory and assimilatory sulphate reduction. Include information
about the environmental conditions and which bacteria you would expect to be associated.
2) Would you expect bacteria that are able to reduce nitrogen to be able to reduce sulphur?
Explain.
3) Why is H2 of importance to sulfate reducing bacteria?
4) How does the Sox system for oxidizing H2S differ from other systems for oxidizing H2S?
Solution
.
ASSIMILATION:
The plants utilize sulfur in the form of sulfates and then reduce it within their cells to H2S
before it is utilized mainly in the synthesis of sulfur amino acids and vitamins.Many bacteria
reduce small amounts of sulfates in order to synthesize sulfur-containing cell components; this is
known as assimilatory sulfate reduction
DISSIMILATION:
The mechanism by which sulfate is reduced involves the conversion of sulfate to sulfite, a
reaction that needs A TP. The sulfite is then reduced to H2S. This DISSIMMILATION of sulfur
as sulfide and its release into the atmosphere has been recognized as a pollution problem. In fact,
it is thought that microbial sulfur pollution might actually outweigh other sulfur pollution
sources.
2.
The ASSIMILATION of sulfur resembles the assimilation of nitrates in the nitrogen cycle.
Microbes immobilize the compounds in the soil. Sulfides, thiosulfates, sulfer, and some other
inorganic ions and compounds are oxidized. Sulfates and other ions are reduced to sulfides
3.
In these systems sulfur is found mostly as a component of sulfur in the form of amino acids and
some vitamins. When the plant and animal proteins degrade, the sulfur is released from its
position in the amino acids, then accumulates in the soil. Then the sulfur is oxidized, and H2S
(hydrogen sulfide) accumulates. The new H2S accumulates through the reduction of sulfates,
which is then oxidized to sulfate.
4.
The sulfur-oxidizing enzyme system of P. pantotrophus is able to oxidize different reduced
inorganic sulfur compounds. It is proposed that the sulfur atom oxidized binds covalently to the
cysteine residue of the SoxY protein to form S-thiocysteine. The outer sulfur atom is oxidized by
the sulfur dehydrogenase SoxCD, and sulfate is hydrolyzed by the sulfatase SoxB. From
available genome sequence data for sulfur-oxidizing bacteria evidence has emerged that similar
proteins are present in anaerobic phototrophic and aerobic lithotrophic bacteria but not in the
archaeon S. solfataricus. Thus, oxidation of sulfur to sulfate may be mediated by very similar
systems in bacteria. However, differences may involve the mechanism of linkage of the sulfur
atom to be oxidized with SoxY during aerobic and anaerobic sulfur metabolism in lithotrophic
and phototrophic bacteria. Also, the systems may differ with respect to the specificities of the
actual sulfur substrates..
The document summarizes various processes involved in drug biotransformation and elimination from the body. It discusses two main phases - Phase I reactions which involve oxidation, reduction and hydrolysis to make drugs more polar. Phase II reactions then conjugate these products to endogenous moieties like glucuronic acid, sulfate or glutathione to facilitate excretion. Specific reactions in each phase like aromatic hydroxylation, carbonyl reduction, glucuronidation and acetylation are explained in detail.
Sulfate assimilation is the process by which plants convert inorganic sulfate into organic sulfur compounds. There are two pathways for sulfate assimilation: reductive and sulfation. The reductive pathway involves three steps - activation of sulfate to APS, reduction of APS to sulfide, and incorporation of sulfide into cysteine. Cysteine can then be used to synthesize other organic sulfur compounds like methionine, glutathione, and S-adenosyl methionine. The sulfation pathway involves phosphorylation of APS to PAPS, which can then add sulfate to organic molecules via sulfotransferases. Sulfur-containing compounds are exported throughout the plant via phloem.
Sulfate assimilation is the process by which plants convert inorganic sulfate into organic sulfur compounds. There are two pathways for sulfate assimilation: reductive and sulfation. The reductive pathway involves three steps - activation of sulfate to APS, reduction of APS to sulfide, and incorporation of sulfide into cysteine. Cysteine can then be used to synthesize other organic sulfur compounds like methionine, glutathione, and S-adenosyl methionine. The sulfation pathway involves phosphorylation of APS to PAPS, which can then add sulfate to organic molecules via sulfotransferases. The organic sulfur compounds produced are exported throughout the plant.
Sulfonamides are antibacterial drugs that work by interfering with bacterial synthesis of folic acid. They are structural analogues of para-aminobenzoic acid (PABA) that bind to and inhibit the enzyme dihydropteroate synthase. This document discusses the mechanism of action, classification, structure-activity relationships, and properties of sulfonamides. It provides examples of commonly used sulfonamides and details their structures, mechanisms, and applications in treatment. The document also addresses issues like ionization, crystalluria, and dissociation constants that are important for understanding sulfonamide properties and use.
Cellular Energy Transfer (Glycolysis and Krebs Cycle) and ATPmuhammad aleem ijaz
This presentation is all about Cellular Energy Transfer with reference to Glycolysis and Kreb Cycle with all their stages involved.
It also includes ATP production in the body, its importance, structure.
Also contains a comparison of energy production in Krebs and Glycolysis cycle.
Sulfur assimilation in plants is a multistep process where sulfate is converted into organic sulfur compounds like cysteine. Sulfate is first activated to form APS and then reduced to sulfite and sulfide with the help of glutathione and ferredoxin. Sulfide then reacts with O-acetylserine to form cysteine. Cysteine can then be used to synthesize methionine and the antioxidant glutathione. Sulfur assimilation requires energy and occurs primarily in shoots, though some may occur in roots. Sulfur containing compounds play important roles in plant structure, function and stress resistance.
biochemistry of sulphur containing aminoacidsglorysunny
Sulfur is an essential nutrient that is incorporated into amino acids like cysteine and methionine. Sulfate is absorbed by plant roots and transported to leaves, where it undergoes a multi-step reduction process to form cysteine. First, sulfate is activated by ATP and converted to APS. APS is then reduced to sulfite and sulfide using electrons from glutathione and ferredoxin. Sulfide reacts with O-acetylserine to form cysteine. Cysteine can then be used to synthesize other sulfur-containing compounds like methionine and the antioxidant glutathione, which transports sulfur within the plant.
Sulfonation and sulfation are industrial chemical processes used to make products like dyes, pigments, and detergents. Sulfonation involves attaching a sulfonic acid group (-SO3H) to an organic compound, often using sulfuric acid at high temperatures. Sulfation attaches a sulfate group (-OSO2OH) or forms a sulfate bridge between two carbon atoms. These reactions are important industrially but difficult to perform on a large scale due to the exothermic and rapid reaction of SO3. Over 1.6 million metric tons of sulfonates and sulfates are produced annually, primarily for use as surfactants in laundry and cleaning products.
Drug metabolism involves the chemical modification of drugs inside the body through enzymatic reactions. There are two main phases - in Phase I, functional groups are introduced onto the drug molecule through reactions like oxidation, reduction and hydrolysis, making the drug more polar and able to be eliminated. In Phase II, polar groups are conjugated onto the drug, like glucuronidation or sulfation, which allows the drug to be more readily excreted from the body. The major sites of drug metabolism are the liver, small intestine and kidneys, and it occurs through cytochrome P450 enzymes in the endoplasmic reticulum and cytosol of cells.
1. Microbial metabolism involves catabolic and anabolic reactions. Catabolism breaks down complex substances into simple ones with energy release, while anabolism uses this energy to synthesize complex substances from simple ones.
2. ATP acts as the universal energy carrier in living organisms. It stores and transfers energy released during catabolism to drive anabolic reactions.
3. Microbes obtain energy and carbon through various metabolic pathways like glycolysis, TCA cycle, and oxidative phosphorylation during aerobic respiration or fermentation during anaerobic respiration.
Normally, lipophilic xenobiotics that enter an animal’s body are rapidly detoxified. Detoxification
can be divided into phase I (primary) and phase II (secondary) processes (Figure 8.1). Phase I reactions consist of oxidation, hydrolysis, and reduction. The phase I metabolites are sometimes polar
enough to be excreted but are usually further converted by phase II reactions. In phase II reactions,
the polar products are conjugated with a variety of endogenous compounds such as sugars, sulfate,
phosphate, amino acids, or glutathione and subsequently excreted. Phase I reactions are usually
responsible for decreasing biological activity of a toxicant, and, therefore, the enzymes involved
are rate limiting with respect to toxicity. The most important function of biotransformation is to
decrease the lipophilicity of xenobiotics so that ultimately they can be excreted. In insects, the
major tissues involved in the metabolism of xenobiotics are the midgut, fat body, and Malpighian
tubules.
1. The document discusses the structure-activity relationships and mechanisms of action of various sulfonamides and sulfones used as antibacterial agents.
2. Key structural features required for antibacterial activity are identified as the sulphanilamide skeleton with amino- and sulphonyl-groups in the para position of the benzene ring.
3. Various sulfonamides discussed include sulfamethoxazole, sulfisoxazole, sulfapyridine, sulfadiazine, mafenide acetate, sulfasalazine, trimethoprim and dapsone. Their mechanisms, uses, and syntheses are described.
The technology uses reclaimed CO₂ as the dyeing medium in a closed loop process. When pressurized, CO₂ becomes supercritical (SC-CO₂). In this state CO₂ has a very high solvent power, allowing the dye to dissolve easily.
Current Ms word generated power point presentation covers major details about the micronuclei test. It's significance and assays to conduct it. It is used to detect the micronuclei formation inside the cells of nearly every multicellular organism. It's formation takes place during chromosomal sepration at metaphase.
EWOCS-I: The catalog of X-ray sources in Westerlund 1 from the Extended Weste...Sérgio Sacani
Context. With a mass exceeding several 104 M⊙ and a rich and dense population of massive stars, supermassive young star clusters
represent the most massive star-forming environment that is dominated by the feedback from massive stars and gravitational interactions
among stars.
Aims. In this paper we present the Extended Westerlund 1 and 2 Open Clusters Survey (EWOCS) project, which aims to investigate
the influence of the starburst environment on the formation of stars and planets, and on the evolution of both low and high mass stars.
The primary targets of this project are Westerlund 1 and 2, the closest supermassive star clusters to the Sun.
Methods. The project is based primarily on recent observations conducted with the Chandra and JWST observatories. Specifically,
the Chandra survey of Westerlund 1 consists of 36 new ACIS-I observations, nearly co-pointed, for a total exposure time of 1 Msec.
Additionally, we included 8 archival Chandra/ACIS-S observations. This paper presents the resulting catalog of X-ray sources within
and around Westerlund 1. Sources were detected by combining various existing methods, and photon extraction and source validation
were carried out using the ACIS-Extract software.
Results. The EWOCS X-ray catalog comprises 5963 validated sources out of the 9420 initially provided to ACIS-Extract, reaching a
photon flux threshold of approximately 2 × 10−8 photons cm−2
s
−1
. The X-ray sources exhibit a highly concentrated spatial distribution,
with 1075 sources located within the central 1 arcmin. We have successfully detected X-ray emissions from 126 out of the 166 known
massive stars of the cluster, and we have collected over 71 000 photons from the magnetar CXO J164710.20-455217.
(June 12, 2024) Webinar: Development of PET theranostics targeting the molecu...Scintica Instrumentation
Targeting Hsp90 and its pathogen Orthologs with Tethered Inhibitors as a Diagnostic and Therapeutic Strategy for cancer and infectious diseases with Dr. Timothy Haystead.
Mending Clothing to Support Sustainable Fashion_CIMaR 2024.pdfSelcen Ozturkcan
Ozturkcan, S., Berndt, A., & Angelakis, A. (2024). Mending clothing to support sustainable fashion. Presented at the 31st Annual Conference by the Consortium for International Marketing Research (CIMaR), 10-13 Jun 2024, University of Gävle, Sweden.
The debris of the ‘last major merger’ is dynamically youngSérgio Sacani
The Milky Way’s (MW) inner stellar halo contains an [Fe/H]-rich component with highly eccentric orbits, often referred to as the
‘last major merger.’ Hypotheses for the origin of this component include Gaia-Sausage/Enceladus (GSE), where the progenitor
collided with the MW proto-disc 8–11 Gyr ago, and the Virgo Radial Merger (VRM), where the progenitor collided with the
MW disc within the last 3 Gyr. These two scenarios make different predictions about observable structure in local phase space,
because the morphology of debris depends on how long it has had to phase mix. The recently identified phase-space folds in Gaia
DR3 have positive caustic velocities, making them fundamentally different than the phase-mixed chevrons found in simulations
at late times. Roughly 20 per cent of the stars in the prograde local stellar halo are associated with the observed caustics. Based
on a simple phase-mixing model, the observed number of caustics are consistent with a merger that occurred 1–2 Gyr ago.
We also compare the observed phase-space distribution to FIRE-2 Latte simulations of GSE-like mergers, using a quantitative
measurement of phase mixing (2D causticality). The observed local phase-space distribution best matches the simulated data
1–2 Gyr after collision, and certainly not later than 3 Gyr. This is further evidence that the progenitor of the ‘last major merger’
did not collide with the MW proto-disc at early times, as is thought for the GSE, but instead collided with the MW disc within
the last few Gyr, consistent with the body of work surrounding the VRM.
Describing and Interpreting an Immersive Learning Case with the Immersion Cub...Leonel Morgado
Current descriptions of immersive learning cases are often difficult or impossible to compare. This is due to a myriad of different options on what details to include, which aspects are relevant, and on the descriptive approaches employed. Also, these aspects often combine very specific details with more general guidelines or indicate intents and rationales without clarifying their implementation. In this paper we provide a method to describe immersive learning cases that is structured to enable comparisons, yet flexible enough to allow researchers and practitioners to decide which aspects to include. This method leverages a taxonomy that classifies educational aspects at three levels (uses, practices, and strategies) and then utilizes two frameworks, the Immersive Learning Brain and the Immersion Cube, to enable a structured description and interpretation of immersive learning cases. The method is then demonstrated on a published immersive learning case on training for wind turbine maintenance using virtual reality. Applying the method results in a structured artifact, the Immersive Learning Case Sheet, that tags the case with its proximal uses, practices, and strategies, and refines the free text case description to ensure that matching details are included. This contribution is thus a case description method in support of future comparative research of immersive learning cases. We then discuss how the resulting description and interpretation can be leveraged to change immersion learning cases, by enriching them (considering low-effort changes or additions) or innovating (exploring more challenging avenues of transformation). The method holds significant promise to support better-grounded research in immersive learning.
Sexuality - Issues, Attitude and Behaviour - Applied Social Psychology - Psyc...PsychoTech Services
A proprietary approach developed by bringing together the best of learning theories from Psychology, design principles from the world of visualization, and pedagogical methods from over a decade of training experience, that enables you to: Learn better, faster!
Travis Hills of MN is Making Clean Water Accessible to All Through High Flux ...Travis Hills MN
By harnessing the power of High Flux Vacuum Membrane Distillation, Travis Hills from MN envisions a future where clean and safe drinking water is accessible to all, regardless of geographical location or economic status.
Authoring a personal GPT for your research and practice: How we created the Q...Leonel Morgado
Thematic analysis in qualitative research is a time-consuming and systematic task, typically done using teams. Team members must ground their activities on common understandings of the major concepts underlying the thematic analysis, and define criteria for its development. However, conceptual misunderstandings, equivocations, and lack of adherence to criteria are challenges to the quality and speed of this process. Given the distributed and uncertain nature of this process, we wondered if the tasks in thematic analysis could be supported by readily available artificial intelligence chatbots. Our early efforts point to potential benefits: not just saving time in the coding process but better adherence to criteria and grounding, by increasing triangulation between humans and artificial intelligence. This tutorial will provide a description and demonstration of the process we followed, as two academic researchers, to develop a custom ChatGPT to assist with qualitative coding in the thematic data analysis process of immersive learning accounts in a survey of the academic literature: QUAL-E Immersive Learning Thematic Analysis Helper. In the hands-on time, participants will try out QUAL-E and develop their ideas for their own qualitative coding ChatGPT. Participants that have the paid ChatGPT Plus subscription can create a draft of their assistants. The organizers will provide course materials and slide deck that participants will be able to utilize to continue development of their custom GPT. The paid subscription to ChatGPT Plus is not required to participate in this workshop, just for trying out personal GPTs during it.
1. SHRI SHIVAJI ARTS, COMMERCE AND SCIENCE COLLEGE, AKOLA
DEPARTMENT OF MICROBIOLOGY
BIOCHEMISTRY OF SULPHUR REDUCTION
GUIDED BY:
DR. MONIKA THAKARE MAM
Presented By:
Shraddha M. Madghe
M.Sc. First Year
2. CONTENT
INTRODUCTION
BIOCHEMISTRY OF SULPHUR REDUCTION
SIMILARITIES BETWEEN ASSIMILATORY AND DISSIMILATORY SULPHATE REDUCTION
DIFFERENCES BETWEEN ASSIMILATORY AND DISSIMILATORY SULPHATE REDUCTION
ASSIMILATORY SULPHUR REDUCTION
DISSIMILATORY SULPHUR REDUCTION
3. Introduction
Sulphur is most abundant and widely distributed element in the nature and found both in free as well as
combined state.
Sulfur occurs in all living matter as a component of certain amino acids. It is abundant in the soil , in
proteins and through a series of microbial transformations, ends up as sulfates usable by plants.
Sulphur enters in soil in the form of plants and animals residue.
It is also added as chemical fertilizer in the form of ammonium sulphate.
Sulphur is taken by plants in most oxidized state i.e. 𝑆𝑂4
2−
.
Due to this, it is added in the soil in the form of ammonium sulphate which supply both nitrogen as well
as sulphur.
4. This involves two types:
1. Assimilatory Sulphur Reduction
2. Dissimilatory Sulphur Reduction
Biochemistry Of Sulphur Reduction
5. Similarities Between Assimilatory and Dissimilatory
Sulphate Reduction
Both processes take place under anaerobic conditions.
Also, the starting compound of both processes is sulphate.
Furthermore, sulphate acts as the final electron acceptor in both processes.
Moreover, both reduction processes are ATP dependent.
In addition, the activation of sulphate to adenosine 5’ – phosphosulphate is common to both processes.
Besides, they are enzyme-catalyzed reactions.
Both reduction processes are carried out by prokaryotes, fungi and photosynthetic organisms.
7. Assimilatory Sulphur Reduction largely restricted to plants and microorganisms where it provides reduced Sulphur
for the formation of amino acids , proteins, nucleic acids, and various Sulphur-containing coenzymes, begins with the
activation of sulphate through reaction with ATP to form adenosine 5'-phosphosulphate (APS) and adenosine 3'-
phosphate 5'-phosphosulphate (PAPS).
Adenosine 5'-phosphosulphate [APS] which is formed during reaction with ATP.
Adenosine 3'-phosphate 5'-phosphosulphate (PAPS) which is formed by further phosphorylation of APS at 3’ position
PAPS acts on high energy sulphate donor in many esterification reactions and it is usually the substrate participating
in sulphate reduction.
Assimilatory Sulphur Reduction
8. APS acts as high energy sulphate donor for many esterification reaction and it is usually participating in assimilatory
sulphate reduction. Assimilatory sulphate reduction involves NADPH linked 2 electrons.
PAPS reduced to give sulphite and 3-phosphoadenosine monophosphate followed by NADPH linked with reduction
of sulphite to sulphide catalysed by sulphide reductase .
Sulphide is incorporated into biomass which by condensation with serine generating system.
Thus, the various transfer reactions of the assimilation sulphate reduction can be summarized as follows:
9. 1.Activation of Sulphate with ATP
Organic sulphate reacts with ATP in the presence of enzyme
sulfurylase to form adenosine 5'-phosphosulphate (APS) and pyrophosphate [PPi].
10. 2. Phosphorylation of APS
PAPS
APS kinase
+
APS ATP
+
ADP
Adenosine 5'-phosphosulphate (APS) reacts with Adenosine triphosphate (ATP) to form 3’-
phosphoadenosine 5’-phosphosulphate(PAPS) and ADP.
11. 3.Reduction of sulphate
The active sulfate of PAPS is subsequently reduced sulfite and adenosine-3,5-diphosphate in presence
of PAPS Reductase.
This involves transfer of electron from NADH/NADPH to PAPS.
PAPS
+ 𝟐 ⅇ−
𝑺𝑶𝟑
𝟐−
ADP
PAPS Reductase
NADH+𝐻+
12. 4. Reduction of Sulphite
NADPH further reduces sulphite to sulphide i.e. immediately incorporated as amino acid
𝑆𝑂3
2−
+3 𝑒− +3𝐻+
𝐻2𝑆 + 𝐻2𝑂
NADPH NAD
S𝑂2
2− 𝑅𝐸𝐷𝑈𝐶𝑇𝐴𝑆𝐸
S𝑂2
2− 𝑅𝐸𝐷𝑈𝐶𝑇𝐴𝑆𝐸
NADPH NAD
𝐻2𝑆 + 𝟑𝐻2𝑂
𝐻2 𝑆𝑂3
2−
+ 6 𝑒− + 6𝐻+
13. 5. The sulphide is immediately used in the formation of cysteine with serine under the catalytic action of enzyme
Serine Sulfyhydrase
Serine
sulfyhydrase
Serine Hydrogen Sulphide Cysteine Water
14. Certain organism utilizes sulphate as terminal electron acceptor in anaerobic respiration with production of 𝐻2𝑆 which
is released to environment.
Anaerobic bacteria carry out dissimilarity sulphate reduction.
The responsible organism are Desulfovibrio vulgaris, Desulfometaculum, etc.
When an obligatory anaerobic bacteria carry out dissimilatory Sulphur reduction they are refers to as sulphate reducers.
In addition to anaerobic sulphate reducing bacteria , some species of bacillus, pseudomonas and saccharomyces are
also found to liberate 𝐻2𝑆 from 𝑆𝑂4 but do not plays a major role in dissimilatory sulphate reduction.
The most common electron donors are pyruvate, lactate and molecular hydrogen.
𝑆𝑂4 + 𝐻2𝑂 𝐻2𝑆 𝑂2
The reduction of sulphate results in production of Hydrogen Sulphide
4𝐻2 + 𝐻2𝑆 2𝐻2𝑂 + 20𝐻−
Dissimilatory Sulphate Reduction
+
𝑆𝑂4
2− +
15. Mechanism Of Sulphate Reaction
Dissimilatory sulfate reduction is a form of anaerobic respiration that uses sulfate as the
terminal electron acceptor to produce hydrogen sulfide.
The mechanism of assimilatory sulphur reduction[ASR] is similar to that of dissimilatory sulphur
reduction[DSR].
As activated sulphur participates in this process and APS reduction, Sulphide reduction, Thiosulphate
reduction are probably involved in cycle.
The reduction of sulphate regenerated 𝑆𝑂3
2−
,thiosulphate i,.e. composite molecules containing sulphur
atoms of different valences and 𝐻2𝑆2.
Although , 𝑆𝑂3reduction differ in mechanism in assimilatory and dissimilatory process. Sulphide
reductase is the similar enzyme present in ASR and DSR.
In DSR process specific cytochrome donate electron at various reductase stage rather than NADPH and
ATP is generated by this electron transfer reduction.
The exact mechanism is not completely understood.