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Assessing the success of forest and landscape 
restoration efforts – What do genetic diversity 
indicators tell us? Riina Jalonen and Judy Loo
2 
Enormous potential of restoration 
to improve resilience – unmet? 
• Aichi Target 15: quantitative 
but also qualitative 
• Political commitments provide 
great potential for build in 
adaptedness in new forests 
• But: little information about the 
quality of restored forests and 
actual success in restoring 
diverse and resilient systems
3 
Genetic diversity is the foundation for: 
Survival of planted trees on the restoration site 
• Origin of seed must match (current and 
future) site conditions to ensure adaptedness 
Good growth, reproduction and resilience over 
tree generations 
• Seed source forests must be large and 
genetically diverse enough to avoid inbreeding 
and to contain genetic material for natural 
selection 
• Good seed collection practices must be 
observed to capture the genetic diversity of the 
seed sources 
Photo: Lee Soong Leong
4 
Example: importance of 
adaptedness for survival 
Juglans nigra (Black walnut) 
• Broad distribution in the US 
• A provenance trial in 7 locations, 
15-25 provenances planted at 
each location 
• Survival after 22 years was 
much higher for local than 
for the other provenances 
(71% vs. 0% at some sites) 
Bresnan et al. 1994 
Photo: Rebecca Sherman
5 
Example: Effects of poor seed collection practices 
accumulate over generations 
Acacia mangium 
• Introduced to Sabah from Australia in 
1967 in two small stands (34 and ca. 
300 trees) 
• All trees had the same mother tree 
• Used to establish more than 15 000 
ha of plantations 
• A nursery trial showed reduction in 
average height by 44% from the first 
to the third generation (Sim 1984) 
Generation 
Height 
(cm) 
First 32.5 
Second 20.7 
Third 18.1
Assessing success 
of restoration 
efforts with genetic 
diversity Indicators
7 
Trends in population condition 
Verifiable indicator Verifier 
7. Genetic condition of selected 
populations (population genetic 
structure where appropriate) 
7. Genetic parameters 
7.1. Effective population size 
7.2. Allelic richness 
7.3. Outcrossing/inbreeding rate 
7.4. Spatial genetic structure 
7.5. Hybridization/introgression 
Trends in (plantation) performance of selected species 
Verifiable indicator Verifier 
9. Profit from breeding vs. loss 
from ill-adapted plantations 
Graudal et al. 2014 
9.1. Seed source performance 
(growth and survival) 
9.2. Realized genetic gain and 
profit
8 
Trends in sustainable use of genetic resources 
Verifiable indicator Verifier 
16. Number of tree species for which 
regulation of use of forest 
reproductive material exist 
16. Number of tree species for which 
regulation of use of forest reproductive 
material exist 
17. Number and type of improved 
seed sources traded/exchanged 
(status of genetic improvement) 
17. Number and type of improved 
seed sources traded/exchanged 
18. Guidelines/regulations for 
matching seed source and planting 
site 
18.1. Certification scheme in place 
18.2. Use of adapted seed sources 
19. Guidelines/regulations for 
composition and harvest of seed 
sources (number of mother trees) 
19. Use of diverse seed sources 
Graudal et al. 2014
9 
Approach – Trends in population condition and 
performance 
• Literature review of genetic studies conducted in restored 
forests 
– How many studies conducted to assess success in restoring 
genetic diversity of tree species in forest restoration? 
– How many of these studies indicate adequate genetic 
considerations in restoration practice? 
• CAB Direct (1973-2014) 
– Tree OR shrub OR forest 
– Restored OR rehabilitated OR reforested OR afforested OR 
revegetated OR reintroduced 
– Genetic OR gene flow OR provenance
10 
Approach – Trends in 
Sustainable use 
• Review of the Country Reports for 
the State of the World’s Forest 
Genetic Resources report (2014) 
• 8 countries in South, Southeast and 
East Asia 
– China, India, Indonesia, Myanmar 
Nepal, Philippines, Sri Lanka 
Thailand 
– Most have set national restoration 
targets and/or established 
national restoration programmes 
• Reports published in 2011-2013
Results
12 
Trends in population condition and performance of 
selected species in restored forests 
• 23 studies 
(2003-2014) 
• 22 tree species 
• 14 families 
• 12 countries 
4 
3 
2 
1 
0 
2003 
2004 
2005 
2006 
2007 
2008 
2009 
2010 
2011 
2012 
2013 
Number of studies
13 
7. Genetic condition of populations 
7.1. Effective population size 
- Seed was collected from few , often related, trees in 6 of 7 
studies 
- Broadhurst et al. 2006, Burgarella et al. 2007, Cruz Neto et al. 2014, Kettle et al. 2008, Krishnan et al. 2013, 
Navascues & Emerson 2007, Ritchie & Krauss 2012 
7.2. Allelic richness 
- Significantly lower in restored than natural populations in 
8 of 13 studies 
- Broadhurst 2011, 2013 ; Burgarella et al. 2007, Huang et al. 2013, Li et al. 2005, Liu et al. 2008, Navascues 
& Emerson 2007, Pakkad et al. 2008, Oliveira et al. 2006, Ritchie & Krauss 2012, Ruan et al. 2013, Salas- 
Leiva et al. 2009, Zhang et al. 2006 
- Geneflow from surrounding natural populations increased 
allelic richness in planted populations in 4 of 5 studies 
- Broadhurst 2013, Cruz Neto et al. 2014, Navascues & Emerson 2007, Pakkad et al. 2008, Ritchie & 
Krauss 2012
14 
7.5 Spatial genetic structure 
• Planted trees were genetically 
distant from nearby natural 
populations in 8 studies of 13 
• Broadhurst 2011, 2013 ; Burgarella et al. 2007, 
Cespedes et al. 2003, Huang et al. 2013, Krishnan et al. 
2013, Li et al. 2005, Liu et al. 2008, Navascues & 
Emerson 2007, Pakkad et al. 2008, Sanchez et al. 2008, 
Sinclair et al. 2006, Ritchie & Krauss 2012, Zhang et al. 
2006 
9.1. Seed source performance 
(growth and survival) 
• Lower germination, survival and/or 
height growth in 
restored vs. natural populations in 
3 of 4 studies 
• Broadhurst et al. 2006, Li et al. 2012, Sanchez et al. 
2008, Ritchie & Krauss 2012
15 
Trends in sustainable use 
of genetic resources – 
Eight Asian countries 
17. Number and type of improved seed 
sources traded/exchanged 
• Seed from identified, selected or 
tested sources available for 270 
species 
• Seed supply is insufficient to meet 
the demand for quantity and/or 
quality, according to 7 of 8 countries 
• Lack of seed from identified sources 
for native, endangered, and 
agroforestry species 
• Awareness of seed quality is low 
Photo: Soumitra Dhali
16 
18.2. Use of adapted seed sources 
– Seed zones based on environmental 
variation in 7 countries 
– Respective seed sources for main 
species identified 
– Detailed seed zones for key species 
based on progeny trials in 3 
countries 
– Problems: 
• In 43% of cases, only one 
identified or selected seed source 
per species in a country 
• Seed production areas insufficient 
to meet the demand in each 
zones 
• Enforcement 
Photo: KMA Bandara
• Mandatory guidelines for tree seed collection for restoration in two countries 
17 
19. Use of diverse seed sources 
• Problems: 
- Lack of quality seed for native sp. 
- Narrow genetic base of trees, 
especially on farm 
- Inadequate requirements for seed 
source areas? 
- Reliance on clonal material for 
restoration 
- Uncontrolled import of low quality 
seed - disincentive
Conclusions
19 
Conclusions 
The results suggest that it is common 
in forest restoration to 
– Pay insufficient attention to 
geographical origin of seed 
– Use seed sources are too small to 
produce quality seed 
– Fail to capture the genetic 
diversity of the source 
populations during seed collection 
Consequences: 
– Poor germination 
– Poor height growth 
– Poor survival
20 
Conclusions 
• Asian countries have made good progress in enhancing seed supply 
from identified and tested sources 
• But 
– These sources are still insufficient to meet the demand, 
especially for native, endangered and on-farm species 
– Even govt led restoration programmes may use unidentified seed or 
rely on clones 
– Relying on one seed source per species not likely to ensure diversity 
and resilience 
– Seed source classification has focused on level of selection and 
geographical origin – but are the source populations also large and 
genetically viable? 
Resilience? Carbon sequestration? Effective use of resources?
Recommendations
22 
“it is extremely difficult to get people 
collect seed from more than just 
one tree” 
- Restoration researcher and practitioner with 20+ years of experience
23 
Recommendations 
• Policy makers: Create demand for good 
quality seed of native tree species 
through political commitment, 
regulatory frameworks and resource 
allocation 
• Experts: Adjust existing seed collection 
guidelines to restoration context and 
changing climate 
• Education and extension : Provide 
training and support to restoration 
practitioners about seed collection and 
propagation techniques for native tree 
species 
• Everyone: Advocate for a more holistic 
view in evaluating restoration success : 
quantity AND quality 
Preparing seed for direct seeding. 
Photo: Luciana Akemi Deluci
24 
Bozzano et al. 2014
25 
Asia Pacific Forest Genetic Resources Programme 
(APFORGEN) 
• New Working Group to review 
current tree seed programmes 
and identify approaches for 
strengthening them 
• www.apforgen.org 
• Similar networks in other 
regions – EUFORGEN, 
LAFORGEN, 
SAFORGEN
Thank you 
r.jalonen@cgiar.org 
www.bioversityinternational.org

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08 riina-jalonen-bioversity-tree-diversity-day-2014-cop12

  • 1. Assessing the success of forest and landscape restoration efforts – What do genetic diversity indicators tell us? Riina Jalonen and Judy Loo
  • 2. 2 Enormous potential of restoration to improve resilience – unmet? • Aichi Target 15: quantitative but also qualitative • Political commitments provide great potential for build in adaptedness in new forests • But: little information about the quality of restored forests and actual success in restoring diverse and resilient systems
  • 3. 3 Genetic diversity is the foundation for: Survival of planted trees on the restoration site • Origin of seed must match (current and future) site conditions to ensure adaptedness Good growth, reproduction and resilience over tree generations • Seed source forests must be large and genetically diverse enough to avoid inbreeding and to contain genetic material for natural selection • Good seed collection practices must be observed to capture the genetic diversity of the seed sources Photo: Lee Soong Leong
  • 4. 4 Example: importance of adaptedness for survival Juglans nigra (Black walnut) • Broad distribution in the US • A provenance trial in 7 locations, 15-25 provenances planted at each location • Survival after 22 years was much higher for local than for the other provenances (71% vs. 0% at some sites) Bresnan et al. 1994 Photo: Rebecca Sherman
  • 5. 5 Example: Effects of poor seed collection practices accumulate over generations Acacia mangium • Introduced to Sabah from Australia in 1967 in two small stands (34 and ca. 300 trees) • All trees had the same mother tree • Used to establish more than 15 000 ha of plantations • A nursery trial showed reduction in average height by 44% from the first to the third generation (Sim 1984) Generation Height (cm) First 32.5 Second 20.7 Third 18.1
  • 6. Assessing success of restoration efforts with genetic diversity Indicators
  • 7. 7 Trends in population condition Verifiable indicator Verifier 7. Genetic condition of selected populations (population genetic structure where appropriate) 7. Genetic parameters 7.1. Effective population size 7.2. Allelic richness 7.3. Outcrossing/inbreeding rate 7.4. Spatial genetic structure 7.5. Hybridization/introgression Trends in (plantation) performance of selected species Verifiable indicator Verifier 9. Profit from breeding vs. loss from ill-adapted plantations Graudal et al. 2014 9.1. Seed source performance (growth and survival) 9.2. Realized genetic gain and profit
  • 8. 8 Trends in sustainable use of genetic resources Verifiable indicator Verifier 16. Number of tree species for which regulation of use of forest reproductive material exist 16. Number of tree species for which regulation of use of forest reproductive material exist 17. Number and type of improved seed sources traded/exchanged (status of genetic improvement) 17. Number and type of improved seed sources traded/exchanged 18. Guidelines/regulations for matching seed source and planting site 18.1. Certification scheme in place 18.2. Use of adapted seed sources 19. Guidelines/regulations for composition and harvest of seed sources (number of mother trees) 19. Use of diverse seed sources Graudal et al. 2014
  • 9. 9 Approach – Trends in population condition and performance • Literature review of genetic studies conducted in restored forests – How many studies conducted to assess success in restoring genetic diversity of tree species in forest restoration? – How many of these studies indicate adequate genetic considerations in restoration practice? • CAB Direct (1973-2014) – Tree OR shrub OR forest – Restored OR rehabilitated OR reforested OR afforested OR revegetated OR reintroduced – Genetic OR gene flow OR provenance
  • 10. 10 Approach – Trends in Sustainable use • Review of the Country Reports for the State of the World’s Forest Genetic Resources report (2014) • 8 countries in South, Southeast and East Asia – China, India, Indonesia, Myanmar Nepal, Philippines, Sri Lanka Thailand – Most have set national restoration targets and/or established national restoration programmes • Reports published in 2011-2013
  • 12. 12 Trends in population condition and performance of selected species in restored forests • 23 studies (2003-2014) • 22 tree species • 14 families • 12 countries 4 3 2 1 0 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 Number of studies
  • 13. 13 7. Genetic condition of populations 7.1. Effective population size - Seed was collected from few , often related, trees in 6 of 7 studies - Broadhurst et al. 2006, Burgarella et al. 2007, Cruz Neto et al. 2014, Kettle et al. 2008, Krishnan et al. 2013, Navascues & Emerson 2007, Ritchie & Krauss 2012 7.2. Allelic richness - Significantly lower in restored than natural populations in 8 of 13 studies - Broadhurst 2011, 2013 ; Burgarella et al. 2007, Huang et al. 2013, Li et al. 2005, Liu et al. 2008, Navascues & Emerson 2007, Pakkad et al. 2008, Oliveira et al. 2006, Ritchie & Krauss 2012, Ruan et al. 2013, Salas- Leiva et al. 2009, Zhang et al. 2006 - Geneflow from surrounding natural populations increased allelic richness in planted populations in 4 of 5 studies - Broadhurst 2013, Cruz Neto et al. 2014, Navascues & Emerson 2007, Pakkad et al. 2008, Ritchie & Krauss 2012
  • 14. 14 7.5 Spatial genetic structure • Planted trees were genetically distant from nearby natural populations in 8 studies of 13 • Broadhurst 2011, 2013 ; Burgarella et al. 2007, Cespedes et al. 2003, Huang et al. 2013, Krishnan et al. 2013, Li et al. 2005, Liu et al. 2008, Navascues & Emerson 2007, Pakkad et al. 2008, Sanchez et al. 2008, Sinclair et al. 2006, Ritchie & Krauss 2012, Zhang et al. 2006 9.1. Seed source performance (growth and survival) • Lower germination, survival and/or height growth in restored vs. natural populations in 3 of 4 studies • Broadhurst et al. 2006, Li et al. 2012, Sanchez et al. 2008, Ritchie & Krauss 2012
  • 15. 15 Trends in sustainable use of genetic resources – Eight Asian countries 17. Number and type of improved seed sources traded/exchanged • Seed from identified, selected or tested sources available for 270 species • Seed supply is insufficient to meet the demand for quantity and/or quality, according to 7 of 8 countries • Lack of seed from identified sources for native, endangered, and agroforestry species • Awareness of seed quality is low Photo: Soumitra Dhali
  • 16. 16 18.2. Use of adapted seed sources – Seed zones based on environmental variation in 7 countries – Respective seed sources for main species identified – Detailed seed zones for key species based on progeny trials in 3 countries – Problems: • In 43% of cases, only one identified or selected seed source per species in a country • Seed production areas insufficient to meet the demand in each zones • Enforcement Photo: KMA Bandara
  • 17. • Mandatory guidelines for tree seed collection for restoration in two countries 17 19. Use of diverse seed sources • Problems: - Lack of quality seed for native sp. - Narrow genetic base of trees, especially on farm - Inadequate requirements for seed source areas? - Reliance on clonal material for restoration - Uncontrolled import of low quality seed - disincentive
  • 19. 19 Conclusions The results suggest that it is common in forest restoration to – Pay insufficient attention to geographical origin of seed – Use seed sources are too small to produce quality seed – Fail to capture the genetic diversity of the source populations during seed collection Consequences: – Poor germination – Poor height growth – Poor survival
  • 20. 20 Conclusions • Asian countries have made good progress in enhancing seed supply from identified and tested sources • But – These sources are still insufficient to meet the demand, especially for native, endangered and on-farm species – Even govt led restoration programmes may use unidentified seed or rely on clones – Relying on one seed source per species not likely to ensure diversity and resilience – Seed source classification has focused on level of selection and geographical origin – but are the source populations also large and genetically viable? Resilience? Carbon sequestration? Effective use of resources?
  • 22. 22 “it is extremely difficult to get people collect seed from more than just one tree” - Restoration researcher and practitioner with 20+ years of experience
  • 23. 23 Recommendations • Policy makers: Create demand for good quality seed of native tree species through political commitment, regulatory frameworks and resource allocation • Experts: Adjust existing seed collection guidelines to restoration context and changing climate • Education and extension : Provide training and support to restoration practitioners about seed collection and propagation techniques for native tree species • Everyone: Advocate for a more holistic view in evaluating restoration success : quantity AND quality Preparing seed for direct seeding. Photo: Luciana Akemi Deluci
  • 24. 24 Bozzano et al. 2014
  • 25. 25 Asia Pacific Forest Genetic Resources Programme (APFORGEN) • New Working Group to review current tree seed programmes and identify approaches for strengthening them • www.apforgen.org • Similar networks in other regions – EUFORGEN, LAFORGEN, SAFORGEN
  • 26. Thank you r.jalonen@cgiar.org www.bioversityinternational.org

Editor's Notes

  1. Philippines: 1.5 billion seedlings on 1.5 Mha from 2011 to 2016 Indonesia: 4 billion trees planted since 2010. Target to restore or rehabilitate 11.5 Mha of degraded lands by 2030. Malaysia: Central Forest Spine to restore connectivity across the Peninsula Build in adaptedness by increasing diversity and mixing in material from more distant sources But: evidence instead suggest enormous waste of resources – establishing forests that have much lower diversity (often inappropriate to the site) than remaining natural fragments because of poor seed collection practices According to FAO State of the World’s Forests, area where trees were planted between 2000 and 2010 is twice as large as the area of successfully established forests. FAO concluded that the lack of genetic considerations contributes to restoration failures.
  2. In the light of climate change this example should be interpreted as highlighting the need for suitable provenance, not necessarily local
  3. State: How is the status of biodiversity changing? Analyzing the condition and status – are we losing genetic diversity/ Where, which and how? Benefit: what are the implications to society – benefit or cost of loss
  4. Response: what does the society do about it? Measuring the implementation of policies or actions to prevent or reduce loss In line with UNEP/CBD AHTEG indicator” Trends in number of effective policy mechanisms implemented to reduce genetic erosion and safeguard genetic diversity related to plant and animal genetic resources” Explain: idnetified, selected, qualified sources
  5. Seed was sometimes collected from as few as 1-4 trees (Burgarella et al. 2007, Krishnan et al. 2013)
  6. Seed was collected in inland populations and planted several 100 kms away near the Pacific coast (Liu et al. 2008) Some species do not have strong spatial genetic structure and seed can be collected from further away than currently (Broadhurst 2011)
  7. National planting programs distribute seed from unidentified or unimproved sources Even if quality seed is available it is not always used
  8. 6 countries have certification systems for seed sources
  9. Guidelines focus on classifying seed source types, regulating distribution across zones
  10. Resilience of restored forests may be even lower than those natural populations Some bias in the selection of study topics towards problematic cases is probable Information from country reports may not be comprehensible Overall few studies on the topic; no increasing trend
  11. Concerns: Seed sources are geographically unrepresentative Inadequate sources to meet the demand? Risk of loss Resiliency of material not known
  12. SBSTTA recommendation