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Manoj C A
PALB 4210
Genetics & Plant Breeding
Tissue culture application for
genetic improvement of plants
4
• What it is...
• Background of it
• Why do that only
• Different types of it
• Advantages
• Application in Plant Breeding
• Different techniques with case studies
• Disadvantages
• Conclusion
5
Tissue culture
6
It is the in vitro aseptic culture of cells,
tissues, organs or whole plant under
controlled nutritional and environmental
conditions.
It produces clones,resultant clones are true-to type
of the selected genotype (unless affected by
mutation during culture)
• Tissue culture had its
origins at the beginning
of the 20th century with
the work of Gottleib
Haberlandt
• 1902- proposed the
concept of in vitro cell
culture
• Pallisade cells, pith
cells, stamen hairs and
stomatal guard cells 7
Contd...,
• 1926 Went-first plant growth hormone - IAA
• 1941 Overbeek was first to add coconut milk
for cell division in Datura
• 1955 Skoog and Miller discovered kinetin as
cell division hormone.
• 1957 Skoog and Miller gave concept of
hormonal control (auxin: cytokinin) of
organ formation
• 1960 Kanta and Maheshwari developed test
tube fertilization technique
• 1962 Murashige and Skoog developed MS
medium with higher salt concentration.
8
Contd...,
9
• 1964 Guha and Maheshwari produced first
haploid plants from pollen grains of Datura
• 1972 Carlson produced first interspecific hybrid
of Nicotiana tabacum by protoplast fusion
• 1978 Melchers et al. carried out somatic
hybridization- Pomato.
• 1987 Klien et al. developed biolistic gene
transfer method for plant transformation.
Why do Plant Tissue Culture?
• Fast commercial propagation of new cultivars.
• Do not usually destroy mother plant.
• Continuous supply of young plants throughout the year.
• Virus free plants.
• Easier to export
• Fast selection for crop improvement.
• True to type
10
11
General steps followed in plant tissue culture
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SEED CULTURE
Somatic embryogenesis
13
PTC Advantages
• large number of clones from a single explant, in a
short time.
• Overcomes seasonal restrictions for seed
germination.
• It takes shortened time, no need to wait for the
whole life cycle of seed development.
• It helps to eliminate plant diseases through careful
stock selection and sterile techniques.
• In vitro cultures can be stored for long time through
cryopreservation.
• Breeding cycle can be shortened
Applications of tissue culture to plant breeding
14
15
1. Meristem culture
Cultivation of axillary or apical shoot
meristems, particularly of shoot apical
meristem
Morel and Martin (1952)
were the first to use
meristem culture to
eradicate viruses from
potatoes
Why no virus in meristems
16
• Viruses move through vascular system which in
meristems is absent
• A high metabolite activity in the actively dividing
meristematic cells does not allow virus
replication
• High endogenous auxin level - inhibit virus
multiplication.
17
Case study
Objectives:
1.Virus free plantlet production by meristem culture
2.Evaluate BBTV and BMV resistance in the banana plants under
green house and field conditions
Materials and Methods
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• Planting material - Amritasagar
• Culture media- MS media
• shoot proliferation –Four levels of BAP (0, 3, 4 and 5
mg/l) and 5 levels of NAA (0.0, 1.0, 1.5, 2.0 and 2.5
mg/l)
• Root formation- four levels of IBA (0, 1, 2 and 3 mg/l)
and 4 levels of NAA (0, 2, 3 and 4 mg/l)
• ELISA for confirmation of virus
19
Results
Conclusion to meristem culture:
2. Somaclonal variations
• Genetic variations in plants that have been produced
by plant tissue culture and can be detected as
genetic or phenotypic traits.
• 1981- term- Larkin and Scowcroft
20
• Creates additional genetic
variability
• Production of secondary
metabolites
• Selection of plants resistant
to various toxins, herbicides,
high salt concentration and
mineral toxicity
• Suitable for breeding of tree
species
• Sometime leads to
undesirable results
• Selected variants are
random and genetically
unstable
• Require extensive and
extended field trials
• May develop variants with
pleiotropic effects which
are not true.
21
SV
22
Objective:
To get regenerants that are having agronomically superior traits
Case study
23
• 3 genotypes : Pavon, Glennson, PAK-16171
• Callus culture- mature embryos
• CIM- Linsmaier & skoog’s media
• Subculture- fifth passage-on to PEG-4000(0,10,15,20 & 25%
w/v)
• Subculture- 90 days with 30 day interval
• Transferred- L&S Media, 2,4-D replaced with IAA & BA for
plant regeneration
Materials and methods
24
Pavon
PAK-16171
25
Conclusion to SV:
3. Mutagenesis
• Any fluctuation of the genome of the
organism by physical or chemical mutagen
• To gain one or two of the traits of greatest
interest without excessively changing
important agronomic traits.
• Physical & chemical mutagens.
26
• Induction of desirable
mutant alleles, which
may not be present in the
germplasm
• Improves specific
characteristics of a well
adapted high Yielding
variety.
• Mainly useful to clonal
and ornamental crops
• Frequency is very low
• Breeder has to screen
large populations to
select desirable
mutations.
• Undesirable side effects
• Detection of recessive
mutations is almost
impossible in clonal crops
and is difficult in
polyploidy species
27
28
Objectives:
 To develop new lines resistant to broom rape
 To generate new breeding material
Case study
29
Materials and methods
• Fertility restorer line- 147R
• Embryo culture- Immature zygotic embryos(11-13 days
old)
• Treated- ultrasound- dose of 25.5W/cm2
for 5, 7, 9, 11 &
13 min before plating on MS media.
• Long term selfing & individual selection.(R5 generation).
• Evaluation – 0.2mg of broomrape seeds+ mixture of soil
& sand(2:1)
• Observation- forty five days after planting.
30
Control genotypes
147 R
MUTANT LINES- 116RM, 117RM, 118RM
Conclusion to mutagenesis:
4. Embryo rescue
• Oldest and most successful in vitro procedures
• To promote the development of an immature or
weak embryo into a viable plant.
• Used for producing plants from interspecific
hybridizations.
• Artificial nutrient medium serves as a substitute
for the endosperm.
• First achieved in 1904 by Hannig in crucifers
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Applications of Embryo rescue
• Breeding incompatible interspecific and intergeneric species
• Overcoming seed dormancy & seed sterility
• Recovery of maternal haploids that develop as a result of
chromosome elimination following interspecific hybridization
• Used in studies on the physiology of seed germination and
development.
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Objectives:
• To transfer TMV resistant genes from C. chinensis to C. annuum
• To find out optimum timing for embryo rescue
Case study
Materials & methods
• Three species including two varieties
• Embryos from Young immature fruits: 27-36 DAP
• MS media
• Highest % of embryo growth- Casein hydrolysate+ yeast
extract
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C. annuum – Kashi Anmol, Pusa jwala
C. chinense (COO-304)
C. frutescence (COO904)
35
36
Conclusion to embryo rescue:
37
5. Double haploid lines
• Method to accelerate the production of homozygous
lines.
• Populations of lines in perfect homozygosity can be
produced in just one generation.
• Savings in time and costs.
• First report of the haploid plant was published by
Blakeslee et al. (1922) in Datura stramonium
• Optimum concentration of colchicine- 0.1 to 0.5%
38
A – Selfings; B – haplodiploidization of microspores
AAAAbb
Applications OF DH
• It is a rapid approach to homozygosity that shortens the
time required for development of new cultivar
• Haploids- valuable to detect and fix desirable recessive
traits.
• It accelerates the breeding cycle and allow better
discrimination between genotype.
• F1 production through DH would facilitate the use of
interspecific crosses.
39
Conclusion to DH:
6. Synthetic seeds: A novel concept
• It is living seed-like structure
derived from somatic embryoids
in vitro culture after
encapsulation by a hydrogel.
• Encapsulated by protective gel
like calcium alginate against
microbes and desiccation.
40
Advantages of Synthetic seeds
 Direct delivery of tissue cultured plants to the field
 Propagation of desirable genotypes with genetic uniformity
 Reduction in cost of vegetative propagated elite plants
 Preservation of germplasm and convenience in germplasm
exchange
 Reduction in dormancy period
 Large production identical embryos in
short time
 It can be produced through out the year 41
42
Development of synthetic seeds involving androgenic and
pro-embryos in elite indica rice
Bidhan Roy and Asit B Mandal, 2008
Objective:
• Encapsulation of embryos, pro-embryos and embryo like
structures of androgenic origin
• Assessment of their germination invitro & invivo conditions
Case study
43
Materials and methods
• Indica rice- IR 72
• Antherculture- mid uninucleate anthers
• CIM- N6 Media
• Regeneration media- MS+ Different combinations of
BAP, Kn, NAA
• Encapsulation- sodium alginate(4%w/v)
Results
• Anther to callus response-60%
• Regeneration of green plants from calli-22.2%
• High rate of multiplication of embryos, pro-embryos and
embryo like structure recorded on MS With 4-6mg/l of BAP.
• Germination of synthetic seeds- high germination % with BAP in
combination with lower concentration of NAA(87.5%)
• Addition of Kn in MS reduced the germination percentage(20%)
44
Conclusion to synthetic seeds:
45
• Conservation of endangered genotypes.
• Helps to keep the genetic background of a crop
• Helps to avoid the loss of the conserved patrimony
due to natural disasters, whether biotic or abiotic
stress.
• Germplasm exchange
• Easy transport & safe exchange of genotypes
7. Germplasm conservation &
Exchange
46
Contd..,
• Sterile plants or ‘recalcitrant’ seeds can
successfully be preserved.
• Cryopreservation - longterm in vitro conservation
method
• It involves the storage of in vitro cells or tissues in
liquid nitrogen.
• Cryobionomics - new approach to study genetic
stability in the cryopreserved plant materials.
47
• provides the mean of transfer of genes with desirable trait into
host plants and recovery of transgenic plants
• promising role for the introduction of agronomically important
traits such as increased yield, better quality and enhanced
resistance to pests and diseases
• It can be achieved by either vector-mediated (indirect gene
transfer) or vector less (direct gene transfer) method.
8. Genetic transformation
Contd..,
• Among vector dependant, Agrobacterium-mediated genetic
transformation is most widely used .
48
49
49% or 181.5 million hectares were biotech
Conclusion:
Tissue culture disadvantages
 Specialized equipment/facilities required
 More technical expertise required
 No possibility of using mechanization
 Protocols not optimized for all species
 Plants produced may not fit industry standards
 Relatively expensive to set up
 Equally vulnerable to environmental factors,
infections and pests because of same genetic material.
50
51
Tissue culture- Nothing but Sophisticated
PLANT BREEDING...,
52

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Tissue culture Applications For Genetic Improvement of Crop plants

  • 1. 1
  • 2. 2
  • 3. 3 Manoj C A PALB 4210 Genetics & Plant Breeding Tissue culture application for genetic improvement of plants
  • 4. 4 • What it is... • Background of it • Why do that only • Different types of it • Advantages • Application in Plant Breeding • Different techniques with case studies • Disadvantages • Conclusion
  • 5. 5
  • 6. Tissue culture 6 It is the in vitro aseptic culture of cells, tissues, organs or whole plant under controlled nutritional and environmental conditions. It produces clones,resultant clones are true-to type of the selected genotype (unless affected by mutation during culture)
  • 7. • Tissue culture had its origins at the beginning of the 20th century with the work of Gottleib Haberlandt • 1902- proposed the concept of in vitro cell culture • Pallisade cells, pith cells, stamen hairs and stomatal guard cells 7
  • 8. Contd..., • 1926 Went-first plant growth hormone - IAA • 1941 Overbeek was first to add coconut milk for cell division in Datura • 1955 Skoog and Miller discovered kinetin as cell division hormone. • 1957 Skoog and Miller gave concept of hormonal control (auxin: cytokinin) of organ formation • 1960 Kanta and Maheshwari developed test tube fertilization technique • 1962 Murashige and Skoog developed MS medium with higher salt concentration. 8
  • 9. Contd..., 9 • 1964 Guha and Maheshwari produced first haploid plants from pollen grains of Datura • 1972 Carlson produced first interspecific hybrid of Nicotiana tabacum by protoplast fusion • 1978 Melchers et al. carried out somatic hybridization- Pomato. • 1987 Klien et al. developed biolistic gene transfer method for plant transformation.
  • 10. Why do Plant Tissue Culture? • Fast commercial propagation of new cultivars. • Do not usually destroy mother plant. • Continuous supply of young plants throughout the year. • Virus free plants. • Easier to export • Fast selection for crop improvement. • True to type 10
  • 11. 11 General steps followed in plant tissue culture
  • 13. 13 PTC Advantages • large number of clones from a single explant, in a short time. • Overcomes seasonal restrictions for seed germination. • It takes shortened time, no need to wait for the whole life cycle of seed development. • It helps to eliminate plant diseases through careful stock selection and sterile techniques. • In vitro cultures can be stored for long time through cryopreservation. • Breeding cycle can be shortened
  • 14. Applications of tissue culture to plant breeding 14
  • 15. 15 1. Meristem culture Cultivation of axillary or apical shoot meristems, particularly of shoot apical meristem Morel and Martin (1952) were the first to use meristem culture to eradicate viruses from potatoes
  • 16. Why no virus in meristems 16 • Viruses move through vascular system which in meristems is absent • A high metabolite activity in the actively dividing meristematic cells does not allow virus replication • High endogenous auxin level - inhibit virus multiplication.
  • 17. 17 Case study Objectives: 1.Virus free plantlet production by meristem culture 2.Evaluate BBTV and BMV resistance in the banana plants under green house and field conditions
  • 18. Materials and Methods 18 • Planting material - Amritasagar • Culture media- MS media • shoot proliferation –Four levels of BAP (0, 3, 4 and 5 mg/l) and 5 levels of NAA (0.0, 1.0, 1.5, 2.0 and 2.5 mg/l) • Root formation- four levels of IBA (0, 1, 2 and 3 mg/l) and 4 levels of NAA (0, 2, 3 and 4 mg/l) • ELISA for confirmation of virus
  • 20. 2. Somaclonal variations • Genetic variations in plants that have been produced by plant tissue culture and can be detected as genetic or phenotypic traits. • 1981- term- Larkin and Scowcroft 20
  • 21. • Creates additional genetic variability • Production of secondary metabolites • Selection of plants resistant to various toxins, herbicides, high salt concentration and mineral toxicity • Suitable for breeding of tree species • Sometime leads to undesirable results • Selected variants are random and genetically unstable • Require extensive and extended field trials • May develop variants with pleiotropic effects which are not true. 21 SV
  • 22. 22 Objective: To get regenerants that are having agronomically superior traits Case study
  • 23. 23 • 3 genotypes : Pavon, Glennson, PAK-16171 • Callus culture- mature embryos • CIM- Linsmaier & skoog’s media • Subculture- fifth passage-on to PEG-4000(0,10,15,20 & 25% w/v) • Subculture- 90 days with 30 day interval • Transferred- L&S Media, 2,4-D replaced with IAA & BA for plant regeneration Materials and methods
  • 26. 3. Mutagenesis • Any fluctuation of the genome of the organism by physical or chemical mutagen • To gain one or two of the traits of greatest interest without excessively changing important agronomic traits. • Physical & chemical mutagens. 26
  • 27. • Induction of desirable mutant alleles, which may not be present in the germplasm • Improves specific characteristics of a well adapted high Yielding variety. • Mainly useful to clonal and ornamental crops • Frequency is very low • Breeder has to screen large populations to select desirable mutations. • Undesirable side effects • Detection of recessive mutations is almost impossible in clonal crops and is difficult in polyploidy species 27
  • 28. 28 Objectives:  To develop new lines resistant to broom rape  To generate new breeding material Case study
  • 29. 29 Materials and methods • Fertility restorer line- 147R • Embryo culture- Immature zygotic embryos(11-13 days old) • Treated- ultrasound- dose of 25.5W/cm2 for 5, 7, 9, 11 & 13 min before plating on MS media. • Long term selfing & individual selection.(R5 generation). • Evaluation – 0.2mg of broomrape seeds+ mixture of soil & sand(2:1) • Observation- forty five days after planting.
  • 30. 30 Control genotypes 147 R MUTANT LINES- 116RM, 117RM, 118RM Conclusion to mutagenesis:
  • 31. 4. Embryo rescue • Oldest and most successful in vitro procedures • To promote the development of an immature or weak embryo into a viable plant. • Used for producing plants from interspecific hybridizations. • Artificial nutrient medium serves as a substitute for the endosperm. • First achieved in 1904 by Hannig in crucifers 31
  • 32. Applications of Embryo rescue • Breeding incompatible interspecific and intergeneric species • Overcoming seed dormancy & seed sterility • Recovery of maternal haploids that develop as a result of chromosome elimination following interspecific hybridization • Used in studies on the physiology of seed germination and development. 32
  • 33. 33 Objectives: • To transfer TMV resistant genes from C. chinensis to C. annuum • To find out optimum timing for embryo rescue Case study
  • 34. Materials & methods • Three species including two varieties • Embryos from Young immature fruits: 27-36 DAP • MS media • Highest % of embryo growth- Casein hydrolysate+ yeast extract 34 C. annuum – Kashi Anmol, Pusa jwala C. chinense (COO-304) C. frutescence (COO904)
  • 35. 35
  • 37. 37 5. Double haploid lines • Method to accelerate the production of homozygous lines. • Populations of lines in perfect homozygosity can be produced in just one generation. • Savings in time and costs. • First report of the haploid plant was published by Blakeslee et al. (1922) in Datura stramonium • Optimum concentration of colchicine- 0.1 to 0.5%
  • 38. 38 A – Selfings; B – haplodiploidization of microspores AAAAbb
  • 39. Applications OF DH • It is a rapid approach to homozygosity that shortens the time required for development of new cultivar • Haploids- valuable to detect and fix desirable recessive traits. • It accelerates the breeding cycle and allow better discrimination between genotype. • F1 production through DH would facilitate the use of interspecific crosses. 39 Conclusion to DH:
  • 40. 6. Synthetic seeds: A novel concept • It is living seed-like structure derived from somatic embryoids in vitro culture after encapsulation by a hydrogel. • Encapsulated by protective gel like calcium alginate against microbes and desiccation. 40
  • 41. Advantages of Synthetic seeds  Direct delivery of tissue cultured plants to the field  Propagation of desirable genotypes with genetic uniformity  Reduction in cost of vegetative propagated elite plants  Preservation of germplasm and convenience in germplasm exchange  Reduction in dormancy period  Large production identical embryos in short time  It can be produced through out the year 41
  • 42. 42 Development of synthetic seeds involving androgenic and pro-embryos in elite indica rice Bidhan Roy and Asit B Mandal, 2008 Objective: • Encapsulation of embryos, pro-embryos and embryo like structures of androgenic origin • Assessment of their germination invitro & invivo conditions Case study
  • 43. 43 Materials and methods • Indica rice- IR 72 • Antherculture- mid uninucleate anthers • CIM- N6 Media • Regeneration media- MS+ Different combinations of BAP, Kn, NAA • Encapsulation- sodium alginate(4%w/v)
  • 44. Results • Anther to callus response-60% • Regeneration of green plants from calli-22.2% • High rate of multiplication of embryos, pro-embryos and embryo like structure recorded on MS With 4-6mg/l of BAP. • Germination of synthetic seeds- high germination % with BAP in combination with lower concentration of NAA(87.5%) • Addition of Kn in MS reduced the germination percentage(20%) 44 Conclusion to synthetic seeds:
  • 45. 45 • Conservation of endangered genotypes. • Helps to keep the genetic background of a crop • Helps to avoid the loss of the conserved patrimony due to natural disasters, whether biotic or abiotic stress. • Germplasm exchange • Easy transport & safe exchange of genotypes 7. Germplasm conservation & Exchange
  • 46. 46 Contd.., • Sterile plants or ‘recalcitrant’ seeds can successfully be preserved. • Cryopreservation - longterm in vitro conservation method • It involves the storage of in vitro cells or tissues in liquid nitrogen. • Cryobionomics - new approach to study genetic stability in the cryopreserved plant materials.
  • 47. 47 • provides the mean of transfer of genes with desirable trait into host plants and recovery of transgenic plants • promising role for the introduction of agronomically important traits such as increased yield, better quality and enhanced resistance to pests and diseases • It can be achieved by either vector-mediated (indirect gene transfer) or vector less (direct gene transfer) method. 8. Genetic transformation
  • 48. Contd.., • Among vector dependant, Agrobacterium-mediated genetic transformation is most widely used . 48
  • 49. 49 49% or 181.5 million hectares were biotech Conclusion:
  • 50. Tissue culture disadvantages  Specialized equipment/facilities required  More technical expertise required  No possibility of using mechanization  Protocols not optimized for all species  Plants produced may not fit industry standards  Relatively expensive to set up  Equally vulnerable to environmental factors, infections and pests because of same genetic material. 50
  • 51. 51 Tissue culture- Nothing but Sophisticated PLANT BREEDING...,
  • 52. 52