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Transductive Support Vector Classification for RNA Related Biological Abstracts Blake Adams Graduate Student Department of Computer Science Advisor:  Dr. Muhammad A. Rahman
Overview ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Statistical Learning Theory   ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Support Vector Machines ,[object Object],[object Object],[object Object]
Precision Through SVM ,[object Object]
Structural Risk Minimization ,[object Object],[object Object]
How does SVM work? ,[object Object],[object Object]
Linearly Separable Data ,[object Object],[object Object],[object Object]
Consequences of hyper-plane selection ,[object Object]
Research Motivation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Expectations ,[object Object],[object Object]
Learning Technique ,[object Object]
Learning Technique  ,[object Object],[object Object],[object Object],[object Object]
Implementing Support Vector Machines ,[object Object],[object Object]
Using SVM Light ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Feature Set ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Scoring Method ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Generating Training Sets for Transductive Learning ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Generating Test Sets for Transductive Learning ,[object Object]
Key Experiments ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Implementation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Implementation ,[object Object],[object Object]
Implementation ,[object Object],[object Object],[object Object],[object Object]
Implementation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Algorithm/Implementation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Mapping a Feature Tokenized Word Discard Is it in the Term Map? Is it in the keyword list? Is word in current document? No Yes No Assign id, docID, set termFreq to 1 Yes Is it in the TermDocFreqMap? Do Nothing No Yes Assign featureId,  set docFreq to 1, assign lastDocId Increment termFreq Yes No Increment docFreq Is word in current document? Yes No Increment docFreq
Implementation ,[object Object],[object Object],[object Object],[object Object]
Implementation ,[object Object]
Results and Conclusions ,[object Object],[object Object],[object Object]
Demonstration
Future Work ,[object Object],[object Object],[object Object]
Acknowledgements ,[object Object],[object Object],[object Object],[object Object]
[object Object],[object Object]

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Project Presentation

  • 1. Transductive Support Vector Classification for RNA Related Biological Abstracts Blake Adams Graduate Student Department of Computer Science Advisor: Dr. Muhammad A. Rahman
  • 2.
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  • 26. Mapping a Feature Tokenized Word Discard Is it in the Term Map? Is it in the keyword list? Is word in current document? No Yes No Assign id, docID, set termFreq to 1 Yes Is it in the TermDocFreqMap? Do Nothing No Yes Assign featureId, set docFreq to 1, assign lastDocId Increment termFreq Yes No Increment docFreq Is word in current document? Yes No Increment docFreq
  • 27.
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  • 33.

Editor's Notes

  1. Classifiers that produce decision boundaries with small margins are more susceptible to model overfitting and