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BIOENERGETICS
Ms. Rabia Aslam
SEMESTER:01 (Spring-2022)
Lec – 04
RECALL:
 Define Buffer and body fluid?
 Body fluid compartments.
 Difference between ECF and ICF.
 Outlines of electrolytes.
 Body buffer systems
 Protein buffer system
 Carbonic acid
 Phosphate buffer system
 What is homeostasis?
Learning Outcomes
 Need of Energy for the Living Organisms
 Thermodynamics
 Bioenergetics
 Types of energy reactions
 Metabolism and its types
 Three thermodynamics quantities
 Cellular energy
 Coupled reactions
The Energetics of life
 A living cell is a dynamic structure. It grows, moves,
synthesize complex molecules, and it selectively shuttles
substances in and out and between membrane-bound
compartments.
 All of this activity requires energy.
 Every cell and every organism must obtain energy from its
surroundings and expend it as efficiently as possible.
Example:
Phototrophs gather radiant energy from sunlight.
CO2 + H2O  Organic compounds +O2
(sunlight)
Animals use the chemical energy stored in plants or other
animals that they consume.
Organic compounds + O2  CO2 + H2O + Energy
Different forms of energy
 Thermal energy (to maintain a constant body temperature).
 Mechanical energy (helps to move and allow to do work)
 Electrical energy (sends nerve impulses and fire signals to and
from our brains).
 Chemical energy (stored in foods and in the body)
Think!
How much food a human being should eat to maintain his
health status?
Why does the brain consume energy even when resting?
Why is it important to maintain electrolyte balance in the
cells?
These questions can only be answered by understanding
the concept of BIOENERGETICS.
WHAT IS BIOENERGETICS?
Bioenergetics describe how living
organisms capture, transform,
store, and utilize energy.
The quantitative study of energy transformation
(changes from one form to another) in living
systems and organisms (THERMODYNAMICS).
TYPES OF ENERGY REACTIONS
Endergonic Reactions
 Chemical reaction that requires a net
input of energy.
 Photosynthesis
6CO2 + 6H2O C6H12O6 + 6O2
Copyright Cmassengale 10
SUN
photons
Light
Energy
(glucose)
Exergonic Reactions
 Chemical reactions that releases energy
 Cellular Respiration
C6H12O6 + 6O2  6CO2 + 6H2O+
Copyright Cmassengale 11
ATP
(glucose)
Energy
What is Metabolism?
The sum total of
the chemical
activities of all
cells.
Copyright Cmassengale 12
Types of Metabolism
Catabolic
Pathways
Anabolic
Pathways
Copyright Cmassengale 13
Catabolic Pathway
 Metabolic reactions which release energy
(exergonic) by breaking down complex molecules in
simpler compounds
 Cellular Respiration
C6H12O6 + 6O2  6CO2 + 6H2O +
Copyright Cmassengale 14
ATP
(glucose)
energy
Anabolic Pathway
 Metabolic reactions, which consume energy
(endergonic), to build complicated molecules from
simpler compounds.
 Photosynthesis
6CO2 + 6H2O  C6H12O6 + 6O2
Copyright Cmassengale 15
SUN light
energy
(glucose)
THERMODYNAMIC QUANTITIES
1. Gibbs free energy (G) and free-energy
change, ΔG.
2. Enthalpy (H) and Enthalpy change ΔH.
3. Entropy (S) and Entropy change ΔS.
GIBBS FREE ENERGY (G)
 It expresses the amount of energy
capable of doing work during a reaction
at constant temperature and pressure.
 Gibbs free energy tells us that whether
a reaction will be spontaneous or not.
 If ΔG is –ve = the process or reaction is
spontaneous.
 If ΔG is +ve = the process or reaction is
nonspontaneous
FREE-ENERGY CHANGE (ΔG)
 It is the change in free energy and the
direction of a reaction at any specified
concentration of products and reactants.
STANDARD FREE ENERGY CHANGE
(ΔG°)
 ΔG° (with the superscript “o”)- energy
change when reactants and products are
at a concentration of 1 mol/L. (under
standard conditions).
The concentration of protons is assumed to be 10-7
mol/L, that is, pH = 7.
NEGATIVE ΔG (Exergonic reaction )
 ΔG is negative when reactants
have more energy that products
then there is a net loss of energy.
 The reaction goes spontaneously
because they can occur without
the addition of energy.
POSITIVE ΔG(Endergonic reactions):
 ΔG is positive when the products of
the reaction contain more free
energy than the reactants.
 There is a net gain of energy.
 The reaction does not go
spontaneously from B to A
 Energy must be added to the
system to proceed the reaction
from B to A.
ΔG IS ZERO:
oThe reactants and products are in
equilibrium.
When a reaction is proceeding spontaneously that is, free
energy is being lost then the reaction continues until ΔG
reaches zero and equilibrium is established
ΔG OF THE FORWARD AND BACK REACTIONS
 The free energy of the forward reaction
(A → B) is equal in magnitude but opposite
in sign to that of the back reaction (B → A).
 Example: If ΔG of the forward reaction is −5
kcal/mol, then that of the back reaction is +5
kcal/mol
ΔG depends on the concentration of reactants
and products
 The ΔG of the reaction A → B depends on
the concentration of the reactant and
product.
•ΔG° = Standard free energy change
•R = Gas constant (1.987 cal/mol K)
•T =Absolute temperature (K)
•ln= Natural logarithm
•[A] and [B] = Actual concentrations of the reactant
and product
At constant temperature and pressure, the
following relationship can be derived:
NON-EQUILIBRIUM CONDITION:
 The concentration of reactant is high
compared with the concentration of
product,
• Thus, the reaction can proceed in the
forward direction.
Example: glucose 6-phosphate is high in conc.
than fructose 6-phosphate.
Relationship between ΔGo and Keq:
 In a reaction A → B, a point of equilibrium is reached
at which no further net chemical change takes place.
 That is, when A is being converted to B as fast as B is
being converted to A.
Contd...
 If Keq = 1, then ΔG° = 0
ΔG°of two consecutive reactions are additive:
 The standard free energy changes (ΔG°) are additive in
any sequence of consecutive reactions, as are the free
energy changes (ΔG).
ΔGs of a pathway are additive:
 This additive property of free energy
changes is very important in biochemical
pathways through which substrates must
pass in a particular direction.
 Example: A → B → C → D → ...)
ENTHALPY (H)
ENTHALPY (H):
 It is the heat content of the reaction
system.
 It reflects the number and kinds of chemical
bonds in the reactants and products.
ENTHALPY CHANGE (ΔH)
 The amount of heat evolved or absorbed in a reaction carried out at
constant pressure.
 When a chemical reaction releases heat, it is said to be
exothermic(combustion) while when it absorbs heat, it is called
endothermic reaction(photosynthesis).
CH4 + 2O2 CO2 + 2H2O + heat
Negative and positive Enthalpy change ΔH
 A negative enthalpy change represents an exothermic
change where energy is released from the reaction.
 A positive enthalpy change represents an endothermic reaction
where energy is taken in from the surroundings.
 The units of ΔH is joules/mole or calories/mole
Entropy
Entropy= disorder
 2nd law of thermodynamics states: The entropy in a system and its
surroundings, must always increase. (the entropy of the universe is
always increasing.
 Within a system there is always tendency to go higher entropy.
 Entropy is not directly the measure of energy itself but it tells how
energy is distributed within a system.
More energy dispersal =more entropy
Example:
 Solid state Liquid state
 Lower entropy Greater entropy
 More ordered More disordered
ENTROPY CHANGE (ΔS)
When the products of a reaction are less complex and
more disordered than the reactants, the reaction is said
to proceed with a gain in entropy.
Cellular Energy - ATP
Copyright Cmassengale 41
What is cellular energy?
 Our bodies contain trillions of cells. Inside
each of them are huge numbers of
tiny, energy-producing power plants called
“mitochondria”.
 Mitochondria convert the food we eat and the
air we breathe into “ATP”, a special type of
fuel that powers our cells, and in turn, us.
ATP
 Components:
1. adenine: nitrogenous base
2. ribose: five carbon sugar
3.phosphate group: chain of 3
Copyright Cmassengale 43
ribose
adenine
P P P
phosphate group
Adenosine Triphosphate
 Three phosphate
groups-(two with
high energy bonds
 Last phosphate
group (PO4) contains
the MOST energy
Copyright Cmassengale 44
 ADP + PO4 + energy ----> ATP
 ATP ----> ADP + energy + PO4
Breaking the Bonds of ATP
 Occurs continually in
cells
 Enzyme ATP-ase can
weaken & break last PO4
bond releasing energy &
free PO4
Copyright Cmassengale 46
How Much ATP Do Cells Use?
 It is estimated that
each cell will generate
and consume
approximately
10,000,000 molecules
of ATP per second
Copyright Cmassengale 47
Reactions are coupled through
common intermediates
 Two chemical reactions have a common
intermediate when they occur sequentially
so that the product of the first reaction is a
substrate for the second
Coupled Reaction - ATP
 The exergonic hydrolysis of
ATP is coupled with the
endergonic dehydration
process by transferring a
phosphate group to another
molecule.
Copyright Cmassengale 49
H2O
H2O
Hydrolysis of ATP
ATP + H2O  ADP + P (exergonic)
Copyright Cmassengale 50
Hydrolysis
(add water)
P P P
Adenosine triphosphate (ATP)
P P P
+
Adenosine diphosphate (ADP)
Hyrolysis is Exergonic
Copyright Cmassengale 51
Energy
Used
by
Cells
Formation of ATP
ADP + P  ATP + H2O
(endergonic)
Copyright Cmassengale 52
P P P
Adenosine triphosphate (ATP)
P P P
+
Adenosine diphosphate (ADP)
Dehydration
(Remove H2O
Energy carried by ATP
 If one phosphate is removed, ADP is
produced;
 If two phosphates are removed, adenosine
monophosphate (AMP) results.
 The standard free energy of hydrolysis of ATP,
ΔGo, is approximately –7.3 kcal/mol for each of
the two terminal phosphate groups.
Standard free energy of hydrolysis
of some important compounds :
Compounds ∆Go (Cal/mol)
High – Energy Phosphates
Phosphoenol pyruvate - 14.8
Carbamoyl phosphate - 12.3
Cyclic AMP - 12.0
1,3 – Bisphosphoglycerate - 11.8
Phosphocreatine - 10.3
Acetyl phosphate - 10.3
S – Adenosylmethionine - 10.0
Pyrophosphate - 8.0
Acetyl CoA - 7.7
ATP→ADP + Pi - 7.3
Standard free energy of hydrolysis
of some important compounds:
Compounds ∆Go (Cal/mol)
Low energy compounds
ADP→AMP + Pi - 6.6
Glucose 1-Phosphate - 5.0
Fructose 6-Phosphate - 3.8
Glucose 6-Phosphate - 3.3
Glycerol 3-Phosphate - 2.2
null.pptx

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null.pptx

  • 1. BIOENERGETICS Ms. Rabia Aslam SEMESTER:01 (Spring-2022) Lec – 04
  • 2. RECALL:  Define Buffer and body fluid?  Body fluid compartments.  Difference between ECF and ICF.  Outlines of electrolytes.  Body buffer systems  Protein buffer system  Carbonic acid  Phosphate buffer system  What is homeostasis?
  • 3. Learning Outcomes  Need of Energy for the Living Organisms  Thermodynamics  Bioenergetics  Types of energy reactions  Metabolism and its types  Three thermodynamics quantities  Cellular energy  Coupled reactions
  • 4. The Energetics of life  A living cell is a dynamic structure. It grows, moves, synthesize complex molecules, and it selectively shuttles substances in and out and between membrane-bound compartments.  All of this activity requires energy.  Every cell and every organism must obtain energy from its surroundings and expend it as efficiently as possible.
  • 5. Example: Phototrophs gather radiant energy from sunlight. CO2 + H2O  Organic compounds +O2 (sunlight) Animals use the chemical energy stored in plants or other animals that they consume. Organic compounds + O2  CO2 + H2O + Energy
  • 6. Different forms of energy  Thermal energy (to maintain a constant body temperature).  Mechanical energy (helps to move and allow to do work)  Electrical energy (sends nerve impulses and fire signals to and from our brains).  Chemical energy (stored in foods and in the body)
  • 7. Think! How much food a human being should eat to maintain his health status? Why does the brain consume energy even when resting? Why is it important to maintain electrolyte balance in the cells? These questions can only be answered by understanding the concept of BIOENERGETICS.
  • 8. WHAT IS BIOENERGETICS? Bioenergetics describe how living organisms capture, transform, store, and utilize energy. The quantitative study of energy transformation (changes from one form to another) in living systems and organisms (THERMODYNAMICS).
  • 9. TYPES OF ENERGY REACTIONS
  • 10. Endergonic Reactions  Chemical reaction that requires a net input of energy.  Photosynthesis 6CO2 + 6H2O C6H12O6 + 6O2 Copyright Cmassengale 10 SUN photons Light Energy (glucose)
  • 11. Exergonic Reactions  Chemical reactions that releases energy  Cellular Respiration C6H12O6 + 6O2  6CO2 + 6H2O+ Copyright Cmassengale 11 ATP (glucose) Energy
  • 12. What is Metabolism? The sum total of the chemical activities of all cells. Copyright Cmassengale 12
  • 14. Catabolic Pathway  Metabolic reactions which release energy (exergonic) by breaking down complex molecules in simpler compounds  Cellular Respiration C6H12O6 + 6O2  6CO2 + 6H2O + Copyright Cmassengale 14 ATP (glucose) energy
  • 15. Anabolic Pathway  Metabolic reactions, which consume energy (endergonic), to build complicated molecules from simpler compounds.  Photosynthesis 6CO2 + 6H2O  C6H12O6 + 6O2 Copyright Cmassengale 15 SUN light energy (glucose)
  • 16.
  • 17. THERMODYNAMIC QUANTITIES 1. Gibbs free energy (G) and free-energy change, ΔG. 2. Enthalpy (H) and Enthalpy change ΔH. 3. Entropy (S) and Entropy change ΔS.
  • 18. GIBBS FREE ENERGY (G)  It expresses the amount of energy capable of doing work during a reaction at constant temperature and pressure.  Gibbs free energy tells us that whether a reaction will be spontaneous or not.
  • 19.  If ΔG is –ve = the process or reaction is spontaneous.  If ΔG is +ve = the process or reaction is nonspontaneous
  • 20. FREE-ENERGY CHANGE (ΔG)  It is the change in free energy and the direction of a reaction at any specified concentration of products and reactants.
  • 21. STANDARD FREE ENERGY CHANGE (ΔG°)  ΔG° (with the superscript “o”)- energy change when reactants and products are at a concentration of 1 mol/L. (under standard conditions). The concentration of protons is assumed to be 10-7 mol/L, that is, pH = 7.
  • 22. NEGATIVE ΔG (Exergonic reaction )  ΔG is negative when reactants have more energy that products then there is a net loss of energy.  The reaction goes spontaneously because they can occur without the addition of energy.
  • 23. POSITIVE ΔG(Endergonic reactions):  ΔG is positive when the products of the reaction contain more free energy than the reactants.  There is a net gain of energy.  The reaction does not go spontaneously from B to A  Energy must be added to the system to proceed the reaction from B to A.
  • 24. ΔG IS ZERO: oThe reactants and products are in equilibrium. When a reaction is proceeding spontaneously that is, free energy is being lost then the reaction continues until ΔG reaches zero and equilibrium is established
  • 25. ΔG OF THE FORWARD AND BACK REACTIONS  The free energy of the forward reaction (A → B) is equal in magnitude but opposite in sign to that of the back reaction (B → A).  Example: If ΔG of the forward reaction is −5 kcal/mol, then that of the back reaction is +5 kcal/mol
  • 26. ΔG depends on the concentration of reactants and products  The ΔG of the reaction A → B depends on the concentration of the reactant and product.
  • 27. •ΔG° = Standard free energy change •R = Gas constant (1.987 cal/mol K) •T =Absolute temperature (K) •ln= Natural logarithm •[A] and [B] = Actual concentrations of the reactant and product At constant temperature and pressure, the following relationship can be derived:
  • 28. NON-EQUILIBRIUM CONDITION:  The concentration of reactant is high compared with the concentration of product, • Thus, the reaction can proceed in the forward direction. Example: glucose 6-phosphate is high in conc. than fructose 6-phosphate.
  • 29. Relationship between ΔGo and Keq:  In a reaction A → B, a point of equilibrium is reached at which no further net chemical change takes place.  That is, when A is being converted to B as fast as B is being converted to A.
  • 30. Contd...  If Keq = 1, then ΔG° = 0
  • 31. ΔG°of two consecutive reactions are additive:  The standard free energy changes (ΔG°) are additive in any sequence of consecutive reactions, as are the free energy changes (ΔG).
  • 32. ΔGs of a pathway are additive:  This additive property of free energy changes is very important in biochemical pathways through which substrates must pass in a particular direction.  Example: A → B → C → D → ...)
  • 34. ENTHALPY (H):  It is the heat content of the reaction system.  It reflects the number and kinds of chemical bonds in the reactants and products.
  • 35. ENTHALPY CHANGE (ΔH)  The amount of heat evolved or absorbed in a reaction carried out at constant pressure.  When a chemical reaction releases heat, it is said to be exothermic(combustion) while when it absorbs heat, it is called endothermic reaction(photosynthesis). CH4 + 2O2 CO2 + 2H2O + heat
  • 36. Negative and positive Enthalpy change ΔH  A negative enthalpy change represents an exothermic change where energy is released from the reaction.  A positive enthalpy change represents an endothermic reaction where energy is taken in from the surroundings.  The units of ΔH is joules/mole or calories/mole
  • 37. Entropy Entropy= disorder  2nd law of thermodynamics states: The entropy in a system and its surroundings, must always increase. (the entropy of the universe is always increasing.  Within a system there is always tendency to go higher entropy.  Entropy is not directly the measure of energy itself but it tells how energy is distributed within a system. More energy dispersal =more entropy
  • 38. Example:  Solid state Liquid state  Lower entropy Greater entropy  More ordered More disordered
  • 39. ENTROPY CHANGE (ΔS) When the products of a reaction are less complex and more disordered than the reactants, the reaction is said to proceed with a gain in entropy.
  • 40.
  • 41. Cellular Energy - ATP Copyright Cmassengale 41
  • 42. What is cellular energy?  Our bodies contain trillions of cells. Inside each of them are huge numbers of tiny, energy-producing power plants called “mitochondria”.  Mitochondria convert the food we eat and the air we breathe into “ATP”, a special type of fuel that powers our cells, and in turn, us.
  • 43. ATP  Components: 1. adenine: nitrogenous base 2. ribose: five carbon sugar 3.phosphate group: chain of 3 Copyright Cmassengale 43 ribose adenine P P P phosphate group
  • 44. Adenosine Triphosphate  Three phosphate groups-(two with high energy bonds  Last phosphate group (PO4) contains the MOST energy Copyright Cmassengale 44
  • 45.  ADP + PO4 + energy ----> ATP  ATP ----> ADP + energy + PO4
  • 46. Breaking the Bonds of ATP  Occurs continually in cells  Enzyme ATP-ase can weaken & break last PO4 bond releasing energy & free PO4 Copyright Cmassengale 46
  • 47. How Much ATP Do Cells Use?  It is estimated that each cell will generate and consume approximately 10,000,000 molecules of ATP per second Copyright Cmassengale 47
  • 48. Reactions are coupled through common intermediates  Two chemical reactions have a common intermediate when they occur sequentially so that the product of the first reaction is a substrate for the second
  • 49. Coupled Reaction - ATP  The exergonic hydrolysis of ATP is coupled with the endergonic dehydration process by transferring a phosphate group to another molecule. Copyright Cmassengale 49 H2O H2O
  • 50. Hydrolysis of ATP ATP + H2O  ADP + P (exergonic) Copyright Cmassengale 50 Hydrolysis (add water) P P P Adenosine triphosphate (ATP) P P P + Adenosine diphosphate (ADP)
  • 51. Hyrolysis is Exergonic Copyright Cmassengale 51 Energy Used by Cells
  • 52. Formation of ATP ADP + P  ATP + H2O (endergonic) Copyright Cmassengale 52 P P P Adenosine triphosphate (ATP) P P P + Adenosine diphosphate (ADP) Dehydration (Remove H2O
  • 53. Energy carried by ATP  If one phosphate is removed, ADP is produced;  If two phosphates are removed, adenosine monophosphate (AMP) results.  The standard free energy of hydrolysis of ATP, ΔGo, is approximately –7.3 kcal/mol for each of the two terminal phosphate groups.
  • 54. Standard free energy of hydrolysis of some important compounds : Compounds ∆Go (Cal/mol) High – Energy Phosphates Phosphoenol pyruvate - 14.8 Carbamoyl phosphate - 12.3 Cyclic AMP - 12.0 1,3 – Bisphosphoglycerate - 11.8 Phosphocreatine - 10.3 Acetyl phosphate - 10.3 S – Adenosylmethionine - 10.0 Pyrophosphate - 8.0 Acetyl CoA - 7.7 ATP→ADP + Pi - 7.3
  • 55. Standard free energy of hydrolysis of some important compounds: Compounds ∆Go (Cal/mol) Low energy compounds ADP→AMP + Pi - 6.6 Glucose 1-Phosphate - 5.0 Fructose 6-Phosphate - 3.8 Glucose 6-Phosphate - 3.3 Glycerol 3-Phosphate - 2.2