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BMB 2101: Metabolism and Human Nutrition
(Theory)
Credit: 3
Course Content: Bioenergetics
Md. Mahdi Hasan Seen
ID: 1902011
Faculty of Agriculture
Khulna Agricultural University
 Definition, importance, objectives & working with
examples
 Types of bioenergetics reactions ( Exergonic and
Endergonic
 Types of metabolism (anabolism & catabolism)
 Laws of bioenergetics
 Free energy in bioenergetics
 Enthalpy and Entropy in bioenergetics
 TCA cycle
 ATP-ADP cycle
 ATP is an universal energy carrier
 Bioenergetics is the study of biochemistry
that concern energy flow in living systems
(environments) and the organisms (plants and
animals) that utilize them.
 All activities of living organisms involve flow
of energy through living systems as well as
changes in energy.
 ie. release, storage and use of energy in living
cells
 the German physician J. R. Mayer, who
discovered the law of the conservation and
transformation of energy (1841) in human
body, may be considered the beginning
of bioenergetics.
 to know how energy is transferred in cells,
tissues, and organisms.
 To know producing, storing or consuming
adenosine triphosphate (ATP)
 to know cellular respiration orphotosynthesis
 To understand how energy involved in making
and breaking of chemical bonds in the
molecules
 to know the tow Thermodynamics laws
(energy exchange)
 To understand how the energy of food stuff
are released & converted into the ATP
 To describe Chemiosmotic theory of ATP
synthesis
 To describe the function of ETC complexes
• Capacity to perform work
• Two examples:
1. Kinetic energy
2. Potential energy
• Energy in the process of doing work.
• Energy of motion.
• Examples:
1. Heat
2. Light energy SUN
• Energy that matter occupies because of it’s
location, arrangement, or position.
• Energy of position.
• Examples:
1. Water behind a dam
2. Chemical energy (gas)
খুলনা কৃ ষি ষিশ্বষিদ্যালয়
GAS
* Glycolysis is the process of breaking down glucose
into pyruvate
 produces two molecules of ATP (per 1 molecule of
glucose)
 produces NADH (nicotinamide adenine dinucleotide)
* Gluconeogenesis is the opposite of glycolysis;
 when the cell's energy charge is low (the concentration
of ADP is higher than ATP), synthesize glucose from
carbon- containing biomolecules such as proteins,
amino, acids, fats,pyruvate, etc .
 For example, proteins can be broken down into
amino acids, and these simpler carbon skeletons
are used to build/ synthesize glucose.
 The citric acid cycle is a process of cellular
respiration in which acetyl coenzyme A,
synthesized from pyruvate dehydrogenase, is first
reacted with oxaloacetate to yield citrate
 reduced coenzymes FADH2 and NADH
 Ketosis is a metabolic process whereby ketone
bodies are used by the cell for energy (instead of
using glucose) when glucose level is low.
 Oxidative phosphorylation and the
electron transport chain is the process
where reducing equivalents such as NADPH, FADH2
and NADH can be used to donate electrons to a
series of redox reactions that take place in
electron transport chain complexes which is
coupled to the proton motive force.
 Photosynthesis, another major
bioenergetic process, is the metabolic pathway
used by plants in which solar energy is used to
synthesize glucose from carbon dioxide and water
 Cells use thousands of different chemical
reactions
this is what is referred to by the term metabolism
Cellular Metabolism
• In general, metabolism can be split into 2 groups of
reactions:
Catabolism, which breaks down molecules,
releasing energy. Some of the energy is
captured in the bonds of ATP
Anabolism, which uses energy from ATP to
synthesize large molecules, including
molecules
Exergonic and Endergonic reactions
It occurs in the cytosol
Its chief site is the mitochondria
ANAEROBIC
Anaerobes produce
energy only by this
pathway due to
absence of Oxygen and
this process is called
sugar Fermentation.
AEROBIC
Itoccures in the4
cytoplasm. The
organism using
oxygen are called
aerobes
Laws of Thermodynamics
The study of energy transformations
that occur in a collection of matter.
Two Laws:
1. First Law of Thermodynamics
2. Second Law of Thermodynamics
• Energy cannot be created or destroyed, but
only converted to other forms.
• This means that the amount of energy in the
universe is constant.
 All energy transformations are inefficient
because every reaction results in an increase
in entropy and the loss of usable energy as
heat
• Entropy: the amount of disorder in a system.
• However living organisms are open systems. They exchange
both material and energy with their surroundings
• Living systems are never at equilibrium with their surroundings
 Gibbs free energy (G): G expresses the
amount of energy capable of doing work
during a reaction at constant temperature
and pressure.
• When a reaction proceeds with the release of
free energy (that is, when the system changes
so as to posses less free energy) ΔG has a
negative value and the reaction is said to be
exergonic
 • In endergonic reactions, the system gains
free energy and ΔG is positive
 • The unit of ΔG is joules/mole or
calories/mole
• Enthalpy (H): H is the heat content of the reacting
system. H reflects the number and kinds of chemical
bounds in the reactants and products.
• When a chemical reaction releases heat, it is said to be
exothermic, the heat content of the products is less than
that of the reactants and ΔH has a negative value
• Reacting systems that take up heat from their
surroundings are endothermic and have positive values
of ΔH
• The unit of ΔH is joules/mole or calories/mole
• Entropy (S): S is a quantitative expression for
the randomness or a disorder in a system
• The unit of ΔS is joules/mole.Kelvin
• Under the constant temperature and pressure
changes in free energy, enthalpy and entropy
in biological systems are related to each
other by the equation
• ΔG= ΔH - TΔS
 • ΔG= ΔH - TΔS
 • ΔG= Change in Gibbs free energy of the
reacting system (G products– G reactives)
 • ΔH= Change in enthalpy of the reacting
system( H products – H reactives)
 • T= Absolute temperature
 • ΔS= Change in entropy of the reacting
system( S products – S reactives)
VC_KAU
 History
 Definition
 Reactions
 Significance
 Functions
 Rate controlling Enzyme
 Regulation of activity
History
 Discovered by Hans Krebs
in 1937
 Received the Nobel Prize
in 1953 Hans Krebs 1900-1981
* Ogsten and potter showed that TCA formed
was citric acid .
 The citric acid cycle – also known as the TCA
(Tricarboxylic acid cycle) or the Krebs cycle –
 It is a series of chemical reactions in mitochondria
used by all aerobic organisms to release stored
energy through the oxidation of acetyl-CoA
 derived from carbohydrates, fats, and proteins,
into adenosine triphosphate and carbon dioxide.
 Site- Mitochondrial matrix
TCA
cycle
Rate controlling enzymes
Citrate synthatase
Isocitrate dehydrogenase
a-keoglutaratedehydrogenase
Regulation of activity by:
Substrate availability
Product inhibition
Allosteric inhibition or activation by other
intermediates
 IN 1929 LOHMANN, FISKE AND SUBBAROW published
ATP (Adenosine triphosphate)
 Adenosine triphosphate (ATP) is
the energy currency of a cell
 serving as the ready and
immediate donor of free
energy.
 It is composed of the sugar ribose, ATP
the nitrogenous base adenine,
and three phosphate group.
Adenosine Tri-phosphate
• ATP transfer energy
from the breakdown
of food molecules to
cell function.
• Energy is released
when phosphate group
(P) is removed
• ADP is charge into ATP when phosphate group (P)
is added
1. ATP contains MORE energy than ADP
because it has more bonds.
2. When a phosphate is REMOVED energy is
RELEASED.
3. When a phosphate is ADDED energy is
NEEDED.
•Energy: up to 36 ATP
molecules (1 glucose)
•Most commonly broken
down to make ATP
•Not stored in large
amounts
•Energy: about 146 ATP
molecules (triglyceride)
• Lipids store the most
energy
• 80% of the enrgy in our body
•Energy: about 36 ATP molecules BUT…
•Proteins are least likely to be broken down to make
ATP,
•Amino acids not
usually needed for
energy
Why is ATP considered the
universal energy currency of cells
why not other nucleotides like
CTP, UTP etc ?
• The other nucleotides -GTP, CTP and
UTP , do participate in metabolic
reactions but the ease with which ATP
can donate single phosphate, two
phosphates, or even Adenosine moiety
is considered a better nucleotide in
energy transfer reactions.
Thank
You
A
Green
Day
Have

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BMB 2101 Metabolism and Human Nutrition Theory

  • 1. BMB 2101: Metabolism and Human Nutrition (Theory) Credit: 3 Course Content: Bioenergetics Md. Mahdi Hasan Seen ID: 1902011 Faculty of Agriculture Khulna Agricultural University
  • 2.  Definition, importance, objectives & working with examples  Types of bioenergetics reactions ( Exergonic and Endergonic  Types of metabolism (anabolism & catabolism)  Laws of bioenergetics  Free energy in bioenergetics  Enthalpy and Entropy in bioenergetics  TCA cycle  ATP-ADP cycle  ATP is an universal energy carrier
  • 3.  Bioenergetics is the study of biochemistry that concern energy flow in living systems (environments) and the organisms (plants and animals) that utilize them.  All activities of living organisms involve flow of energy through living systems as well as changes in energy.  ie. release, storage and use of energy in living cells
  • 4.  the German physician J. R. Mayer, who discovered the law of the conservation and transformation of energy (1841) in human body, may be considered the beginning of bioenergetics.
  • 5.  to know how energy is transferred in cells, tissues, and organisms.  To know producing, storing or consuming adenosine triphosphate (ATP)  to know cellular respiration orphotosynthesis  To understand how energy involved in making and breaking of chemical bonds in the molecules
  • 6.  to know the tow Thermodynamics laws (energy exchange)  To understand how the energy of food stuff are released & converted into the ATP  To describe Chemiosmotic theory of ATP synthesis  To describe the function of ETC complexes
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  • 8. • Capacity to perform work • Two examples: 1. Kinetic energy 2. Potential energy
  • 9. • Energy in the process of doing work. • Energy of motion. • Examples: 1. Heat 2. Light energy SUN
  • 10. • Energy that matter occupies because of it’s location, arrangement, or position. • Energy of position. • Examples: 1. Water behind a dam 2. Chemical energy (gas) খুলনা কৃ ষি ষিশ্বষিদ্যালয় GAS
  • 11. * Glycolysis is the process of breaking down glucose into pyruvate  produces two molecules of ATP (per 1 molecule of glucose)  produces NADH (nicotinamide adenine dinucleotide) * Gluconeogenesis is the opposite of glycolysis;  when the cell's energy charge is low (the concentration of ADP is higher than ATP), synthesize glucose from carbon- containing biomolecules such as proteins, amino, acids, fats,pyruvate, etc .
  • 12.  For example, proteins can be broken down into amino acids, and these simpler carbon skeletons are used to build/ synthesize glucose.  The citric acid cycle is a process of cellular respiration in which acetyl coenzyme A, synthesized from pyruvate dehydrogenase, is first reacted with oxaloacetate to yield citrate  reduced coenzymes FADH2 and NADH  Ketosis is a metabolic process whereby ketone bodies are used by the cell for energy (instead of using glucose) when glucose level is low.
  • 13.  Oxidative phosphorylation and the electron transport chain is the process where reducing equivalents such as NADPH, FADH2 and NADH can be used to donate electrons to a series of redox reactions that take place in electron transport chain complexes which is coupled to the proton motive force.  Photosynthesis, another major bioenergetic process, is the metabolic pathway used by plants in which solar energy is used to synthesize glucose from carbon dioxide and water
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  • 18.  Cells use thousands of different chemical reactions this is what is referred to by the term metabolism
  • 19. Cellular Metabolism • In general, metabolism can be split into 2 groups of reactions: Catabolism, which breaks down molecules, releasing energy. Some of the energy is captured in the bonds of ATP Anabolism, which uses energy from ATP to synthesize large molecules, including molecules Exergonic and Endergonic reactions
  • 20. It occurs in the cytosol
  • 21. Its chief site is the mitochondria
  • 22. ANAEROBIC Anaerobes produce energy only by this pathway due to absence of Oxygen and this process is called sugar Fermentation. AEROBIC Itoccures in the4 cytoplasm. The organism using oxygen are called aerobes
  • 23. Laws of Thermodynamics The study of energy transformations that occur in a collection of matter. Two Laws: 1. First Law of Thermodynamics 2. Second Law of Thermodynamics
  • 24. • Energy cannot be created or destroyed, but only converted to other forms. • This means that the amount of energy in the universe is constant.
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  • 27.  All energy transformations are inefficient because every reaction results in an increase in entropy and the loss of usable energy as heat • Entropy: the amount of disorder in a system. • However living organisms are open systems. They exchange both material and energy with their surroundings • Living systems are never at equilibrium with their surroundings
  • 28.  Gibbs free energy (G): G expresses the amount of energy capable of doing work during a reaction at constant temperature and pressure. • When a reaction proceeds with the release of free energy (that is, when the system changes so as to posses less free energy) ΔG has a negative value and the reaction is said to be exergonic
  • 29.  • In endergonic reactions, the system gains free energy and ΔG is positive  • The unit of ΔG is joules/mole or calories/mole
  • 30. • Enthalpy (H): H is the heat content of the reacting system. H reflects the number and kinds of chemical bounds in the reactants and products. • When a chemical reaction releases heat, it is said to be exothermic, the heat content of the products is less than that of the reactants and ΔH has a negative value • Reacting systems that take up heat from their surroundings are endothermic and have positive values of ΔH • The unit of ΔH is joules/mole or calories/mole
  • 31. • Entropy (S): S is a quantitative expression for the randomness or a disorder in a system • The unit of ΔS is joules/mole.Kelvin • Under the constant temperature and pressure changes in free energy, enthalpy and entropy in biological systems are related to each other by the equation • ΔG= ΔH - TΔS
  • 32.  • ΔG= ΔH - TΔS  • ΔG= Change in Gibbs free energy of the reacting system (G products– G reactives)  • ΔH= Change in enthalpy of the reacting system( H products – H reactives)  • T= Absolute temperature  • ΔS= Change in entropy of the reacting system( S products – S reactives)
  • 34.  History  Definition  Reactions  Significance  Functions  Rate controlling Enzyme  Regulation of activity
  • 35. History  Discovered by Hans Krebs in 1937  Received the Nobel Prize in 1953 Hans Krebs 1900-1981 * Ogsten and potter showed that TCA formed was citric acid .
  • 36.  The citric acid cycle – also known as the TCA (Tricarboxylic acid cycle) or the Krebs cycle –  It is a series of chemical reactions in mitochondria used by all aerobic organisms to release stored energy through the oxidation of acetyl-CoA  derived from carbohydrates, fats, and proteins, into adenosine triphosphate and carbon dioxide.  Site- Mitochondrial matrix
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  • 48. Rate controlling enzymes Citrate synthatase Isocitrate dehydrogenase a-keoglutaratedehydrogenase Regulation of activity by: Substrate availability Product inhibition Allosteric inhibition or activation by other intermediates
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  • 51.  IN 1929 LOHMANN, FISKE AND SUBBAROW published ATP (Adenosine triphosphate)  Adenosine triphosphate (ATP) is the energy currency of a cell  serving as the ready and immediate donor of free energy.  It is composed of the sugar ribose, ATP the nitrogenous base adenine, and three phosphate group.
  • 53. • ATP transfer energy from the breakdown of food molecules to cell function. • Energy is released when phosphate group (P) is removed • ADP is charge into ATP when phosphate group (P) is added
  • 54. 1. ATP contains MORE energy than ADP because it has more bonds. 2. When a phosphate is REMOVED energy is RELEASED. 3. When a phosphate is ADDED energy is NEEDED.
  • 55. •Energy: up to 36 ATP molecules (1 glucose) •Most commonly broken down to make ATP •Not stored in large amounts
  • 56. •Energy: about 146 ATP molecules (triglyceride) • Lipids store the most energy • 80% of the enrgy in our body
  • 57. •Energy: about 36 ATP molecules BUT… •Proteins are least likely to be broken down to make ATP, •Amino acids not usually needed for energy
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  • 60. Why is ATP considered the universal energy currency of cells why not other nucleotides like CTP, UTP etc ?
  • 61. • The other nucleotides -GTP, CTP and UTP , do participate in metabolic reactions but the ease with which ATP can donate single phosphate, two phosphates, or even Adenosine moiety is considered a better nucleotide in energy transfer reactions.