Presented by:
1.Akshay Patil
2.Apoorva Khairnar
3.Shravan Shah
Objectives
1.

The fastest known doubling time for a bacterium and under what
conditions this occurs

2.

The slowest estimated doubling time for a bacterium and under
what conditions this occurs

3.

Calculate a growth rate, u, from the slope of a growth curve

4.

Compare and contrast growth in pure culture with growth in the
environment

5.

The growth curve and the parts of the curve

6.

A mathematical equation for each part of the curve as well as the
Monod equation

7.

At least two electron acceptors that can be used under anaerobic
conditions in place of oxygen

8.

Whether aerobic or anaerobic metabolism yields more energy and
why

9.

The mass balance equation for aerobic metabolism
Growth Curve

S t a t io n a r y

7 .0

De

Expo
nent
ia l

10

Log CFU/ml
L o g C F U /m l

8 .0

6 .0
5 .0
4 .0
Lag
Lag

T im e

a th

O p tic l d e n s it y
Opticala Density

T u r b i d i t y ( o p t i c a l d e n s it y )

9 .0
Lag phase

Three causes for lag:

physiological lag
low initial numbers
appropriate gene(s) absent

growth approx. = 0

(dX/dt = 0)
Exponential phase
Nutrients and conditions are not limiting
growth = 2n

or

X = 2 nX 0

Where X0 = initial number of cells
X = final number of cells
n = number of generations

20
20
21
21
22
22
23
23
24
24
2n
2n
Viable Count (CFU/ml)

1.0e+8

1.0e+7
Example: An experiment was performed in a lab flask growing cells on
0.1% salicylate and starting with 2.21.0e+6 4 cells. As the experiment
x 10
below shows, at the end there were 3.8 x 109 cells.
1.0e+5

This is an increase is 5 orders of magnitude!!
1.0e+4
0

20

How many doublings or generations occurred?

40

60

80

Time (Hours)

X = 2nX0

3.8 x 109 = 2n(2.2 x 104)
1.73 x 10 = 2
5

n

log(1.73 x 105) = nlog2
17.4 = n

Cells grown on salicylate, 0.1%

100
How does this compare to growth in the soil?
Response of culturable microbial community to addition of a
carbon source.
Unamended
CFU/g soil

Soil
Pima
Brazito
Clover Springs
Mt. Lemmon

1% Glucose
CFU/g soil

Log Increase

5.6 x 105
1.1 x 106
1.4 x 107
1.4 x 106

4.6 x 107
1.1 x 108
1.9 x 108
8.3 x 107

1.9
2.0
1.1
1.7

Only a 1 to 2 order of increase!!
Now compare how environmental conditions
can impact metabolism in soil

Degradation of straw under different conditions
Residue
Wheat straw, laboratory
Rye straw, Nigeria
Rye straw, England
Wheat straw, Saskatoon

Half-life
Days

u
Days-1

Relative rate

9
17
75
160

0.008
0.04
0.01
0.003

1
0.5
0.125
0.05
Calculating growth rate during exponential growth
dX/dt = uX

where u = specific growth rate (h-1)

Rearrange: dX/X = udt
Integrate: lnX = ut + C, where C = lnX0
dX/dt = uX
where u = specific growth rate (h-1)
lnX = ut + ln X0 or
X = X0eut
y = mx + b (equation for a straight line)

Note that u, the growth rate, is the slope of this straight line
Calculating growth rate during exponential growth
dX/dt = uX

where u = specific growth rate (h-1)

Rearrange: dX/X = udt
Integrate: lnX = ut + C,

where C = lnX0

lnX = ut + ln X0 or
X = X0eut
y = mx + b (equation for a straight line)

Note that u, the growth rate, is the slope of this straight line
0

20

40

60

80

100

Time (Hours)

Find the slope of this growth curve

lnX = ut + ln X0

or u = lnX – lnX0
t – t0

u = ln 5.5 x 108 – ln 1.7 x 105
8.2 - 4.2

= 2 hr-1
Now calculate the doubling time
If you know the growth rate, u, you can calculate the doubling time
for the culture.
lnX = ut + ln X0
For X to be doubled: X/X0 = 2
or: 2 = eut
From the previous problem, u = 2 hr-1,
2 = e2(t)
t = 0.34 hr = 20.4 min

What is fastest known doubling time? Slowest?
How can you change the growth rate???
When under ideal, nonlimiting conditions, the growth rate can only be
changed by changing the temperature (growth increases with increasing
temp.). Otherwise to change the growth rate, you must obtain a different
microbe or use a different substrate.
In the environment (non-ideal conditions), the growth rate can be
changed by figuring out what the limiting condition in that environment is.
Question: Is exponential growth a frequent occurrence in the
environment?
Growth Curve
T u r b i d i t y ( o p t i c a l d e n s it y )

9 .0

7 .0

De

6 .0
5 .0
4 .0
Lag

T im e

a th

O p tic a l d e n s it y

S t a t io n a r y
Stationary

Expo
nent
ia l

Log

10

C F U /m l

8 .0
Stationary phase
nutrients become limiting and/or toxic waste products accumulate

growth = death

(dX/dt = 0)

Death phase

death > growth

(dX/dt = -kdX)
Viable Coun

1.0e+6
Monod Equation
1.0e+5
The exponential growth equation describes only a part of the growth
curve as shown in the graph below.
1.0e+4
0

20

40

60

80

100

The Monod equation describes the dependence of the growth rate on the
Time (Hours)
substrate concentration:
u =

.

um S
Ks + S

u = specific growth rate (h-1)
um = maximal growth rate (h-1)
S = substrate concentration (mg L-1)
Ks = half saturation constant (mg L-1)
1.0e+10
1.0e+9

Viable Count (CFU/ml)

Combining the Monod equation and the exponential growth equation allows
1.0e+8
expression of an equation that describes the increase in cell mass through
the lag, exponential, and stationary phases of growth:
1.0e+7

u =

um . S
Ks + S

Monod equation

1.0e+6

dX/dt = uX

1.0e+5

u = dX/Xdt

1.0e+4
0

20

40

60

80

Time (Hours)
Exponential growth equation

dX/dt = um. S . X
Ks + S
Does not describe death phase!

100
There are two special cases for the Monod growth equation
1.

At high substrate concentration when S>>Ks, the Monod equation
simplifies to:

dX/dt = umX
growth will occur at the
maximal growth rate.
2.

Ks

At low substrate concentration
when S<< Ks, the Monod equation
simplifies to:

dX/dt = um. S . X
Ks
growth will have a first order dependence on substrate concentration
(growth rate is very sensitive to S).
Which of the above two cases is the norm for environmental samples?
Growth in terms of substrate loss
In this case the growth equation must be expressed in terms of substrate
concentration. The equations for cell increase and substrate loss can be
related by the cell yield:
dS/dt = -1/Y (dX/dt)

where Y = cell yield
Y = g cell mass produced
g substrate consumed

Glucose (C6H12O6)
0.4

Pentachlorophenol (C6Cl5OH)
0.05

Octadecane (C18H38)
1.49
Growth in terms of substrate loss
dS/dt = -1/Y (dX/dt)
Combine with: dX/dt = um. S . X

dS/dt = - um (S . X)

Ks + S

Y (Ks + S)

R e m a in in g
p h e n a n th re n e (% )

Which parts of this curve does the equation describe?

0

1

2

3

4
T im e ( d a y s )

5

6

7

8
Kinetics of growth

Kinetics of growth

  • 1.
  • 2.
    Objectives 1. The fastest knowndoubling time for a bacterium and under what conditions this occurs 2. The slowest estimated doubling time for a bacterium and under what conditions this occurs 3. Calculate a growth rate, u, from the slope of a growth curve 4. Compare and contrast growth in pure culture with growth in the environment 5. The growth curve and the parts of the curve 6. A mathematical equation for each part of the curve as well as the Monod equation 7. At least two electron acceptors that can be used under anaerobic conditions in place of oxygen 8. Whether aerobic or anaerobic metabolism yields more energy and why 9. The mass balance equation for aerobic metabolism
  • 3.
    Growth Curve S ta t io n a r y 7 .0 De Expo nent ia l 10 Log CFU/ml L o g C F U /m l 8 .0 6 .0 5 .0 4 .0 Lag Lag T im e a th O p tic l d e n s it y Opticala Density T u r b i d i t y ( o p t i c a l d e n s it y ) 9 .0
  • 4.
    Lag phase Three causesfor lag: physiological lag low initial numbers appropriate gene(s) absent growth approx. = 0 (dX/dt = 0)
  • 5.
    Exponential phase Nutrients andconditions are not limiting growth = 2n or X = 2 nX 0 Where X0 = initial number of cells X = final number of cells n = number of generations 20 20 21 21 22 22 23 23 24 24 2n 2n
  • 6.
    Viable Count (CFU/ml) 1.0e+8 1.0e+7 Example:An experiment was performed in a lab flask growing cells on 0.1% salicylate and starting with 2.21.0e+6 4 cells. As the experiment x 10 below shows, at the end there were 3.8 x 109 cells. 1.0e+5 This is an increase is 5 orders of magnitude!! 1.0e+4 0 20 How many doublings or generations occurred? 40 60 80 Time (Hours) X = 2nX0 3.8 x 109 = 2n(2.2 x 104) 1.73 x 10 = 2 5 n log(1.73 x 105) = nlog2 17.4 = n Cells grown on salicylate, 0.1% 100
  • 7.
    How does thiscompare to growth in the soil? Response of culturable microbial community to addition of a carbon source. Unamended CFU/g soil Soil Pima Brazito Clover Springs Mt. Lemmon 1% Glucose CFU/g soil Log Increase 5.6 x 105 1.1 x 106 1.4 x 107 1.4 x 106 4.6 x 107 1.1 x 108 1.9 x 108 8.3 x 107 1.9 2.0 1.1 1.7 Only a 1 to 2 order of increase!!
  • 8.
    Now compare howenvironmental conditions can impact metabolism in soil Degradation of straw under different conditions Residue Wheat straw, laboratory Rye straw, Nigeria Rye straw, England Wheat straw, Saskatoon Half-life Days u Days-1 Relative rate 9 17 75 160 0.008 0.04 0.01 0.003 1 0.5 0.125 0.05
  • 9.
    Calculating growth rateduring exponential growth dX/dt = uX where u = specific growth rate (h-1) Rearrange: dX/X = udt Integrate: lnX = ut + C, where C = lnX0 dX/dt = uX where u = specific growth rate (h-1) lnX = ut + ln X0 or X = X0eut y = mx + b (equation for a straight line) Note that u, the growth rate, is the slope of this straight line
  • 10.
    Calculating growth rateduring exponential growth dX/dt = uX where u = specific growth rate (h-1) Rearrange: dX/X = udt Integrate: lnX = ut + C, where C = lnX0 lnX = ut + ln X0 or X = X0eut y = mx + b (equation for a straight line) Note that u, the growth rate, is the slope of this straight line
  • 11.
    0 20 40 60 80 100 Time (Hours) Find theslope of this growth curve lnX = ut + ln X0 or u = lnX – lnX0 t – t0 u = ln 5.5 x 108 – ln 1.7 x 105 8.2 - 4.2 = 2 hr-1
  • 12.
    Now calculate thedoubling time If you know the growth rate, u, you can calculate the doubling time for the culture. lnX = ut + ln X0 For X to be doubled: X/X0 = 2 or: 2 = eut From the previous problem, u = 2 hr-1, 2 = e2(t) t = 0.34 hr = 20.4 min What is fastest known doubling time? Slowest?
  • 13.
    How can youchange the growth rate??? When under ideal, nonlimiting conditions, the growth rate can only be changed by changing the temperature (growth increases with increasing temp.). Otherwise to change the growth rate, you must obtain a different microbe or use a different substrate. In the environment (non-ideal conditions), the growth rate can be changed by figuring out what the limiting condition in that environment is. Question: Is exponential growth a frequent occurrence in the environment?
  • 14.
    Growth Curve T ur b i d i t y ( o p t i c a l d e n s it y ) 9 .0 7 .0 De 6 .0 5 .0 4 .0 Lag T im e a th O p tic a l d e n s it y S t a t io n a r y Stationary Expo nent ia l Log 10 C F U /m l 8 .0
  • 15.
    Stationary phase nutrients becomelimiting and/or toxic waste products accumulate growth = death (dX/dt = 0) Death phase death > growth (dX/dt = -kdX)
  • 16.
    Viable Coun 1.0e+6 Monod Equation 1.0e+5 Theexponential growth equation describes only a part of the growth curve as shown in the graph below. 1.0e+4 0 20 40 60 80 100 The Monod equation describes the dependence of the growth rate on the Time (Hours) substrate concentration: u = . um S Ks + S u = specific growth rate (h-1) um = maximal growth rate (h-1) S = substrate concentration (mg L-1) Ks = half saturation constant (mg L-1)
  • 17.
    1.0e+10 1.0e+9 Viable Count (CFU/ml) Combiningthe Monod equation and the exponential growth equation allows 1.0e+8 expression of an equation that describes the increase in cell mass through the lag, exponential, and stationary phases of growth: 1.0e+7 u = um . S Ks + S Monod equation 1.0e+6 dX/dt = uX 1.0e+5 u = dX/Xdt 1.0e+4 0 20 40 60 80 Time (Hours) Exponential growth equation dX/dt = um. S . X Ks + S Does not describe death phase! 100
  • 18.
    There are twospecial cases for the Monod growth equation 1. At high substrate concentration when S>>Ks, the Monod equation simplifies to: dX/dt = umX growth will occur at the maximal growth rate. 2. Ks At low substrate concentration when S<< Ks, the Monod equation simplifies to: dX/dt = um. S . X Ks growth will have a first order dependence on substrate concentration (growth rate is very sensitive to S). Which of the above two cases is the norm for environmental samples?
  • 19.
    Growth in termsof substrate loss In this case the growth equation must be expressed in terms of substrate concentration. The equations for cell increase and substrate loss can be related by the cell yield: dS/dt = -1/Y (dX/dt) where Y = cell yield Y = g cell mass produced g substrate consumed Glucose (C6H12O6) 0.4 Pentachlorophenol (C6Cl5OH) 0.05 Octadecane (C18H38) 1.49
  • 20.
    Growth in termsof substrate loss dS/dt = -1/Y (dX/dt) Combine with: dX/dt = um. S . X dS/dt = - um (S . X) Ks + S Y (Ks + S) R e m a in in g p h e n a n th re n e (% ) Which parts of this curve does the equation describe? 0 1 2 3 4 T im e ( d a y s ) 5 6 7 8

Editor's Notes

  • #9 Nigeria hot all year round with a rainy season and a dry season England is a warm summer and cold winter and plenty of rainfall Saskatoon cold winters and summers in the high 60s. Plenty of rainfall