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www.ijeee-apm.com International Journal of Electrical & Electronics Engineering 9
IJEEE, Vol. 1, Issue 3 (June, 2014) e-ISSN: 1694-2310 | p-ISSN: 1694-2426
DETECTING AND COUNTING THE NO. OF
WHITE BLOOD CELLS IN BLOOD SAMPLE
IMAGES BY COLOR BASED
K-MEANS CLUSTERING
1
Neha Sharma, 2
Nishant Kinra
1
Indira Gandhi Delhi Technical University for Women, New Delhi, India
2
Deenbandhu Chhotu Ram University of Science and Technology, Haryana, India
1
neha.sksharma@yahoo.co.in, 2
nishant.kinra@gmail.com
Abstract- Nowadays, many diseases which were incurable to
human become the main topic in every country. Solemn
illness that becomes killer to mankind was the kind that
cannot be detect early, no early symptoms, and can spread
throughout the body without notice. Sometimes, it can only
be realized after critical conditions. This kind of disease was
incurable and cause death to the infected person. One of the
challenges in medical science is to detect and identify
diseases for early detection by medical imaging technology.
Medical imaging modalities such as X- Ray, Computed
Tomography (CT) Scan, Magnetic Resonance Imaging
(MRI), and Ultrasound produce medical image captured
from human body arrangement for analysis and diagnosis.
In addition, analysis in medical field for diagnosis was done
by counting cells from microscopic images. Moreover, blood
related diseases such as anemia or leukemia due to lack or
extreme production of blood cells also become serious
illness which causes death. Early discovery of these
diseases needs to be done to reduce death rate. One of the
technologies used to solve the problem is by image
processing. However, this method required knowledge and
ability to apply many different methods in an analysis.
Therefore, a simple and easy method needs to be identified
to help clinician.
Index Terms- Blood cancer detection, Color based
clustering, WBC Count, K-means clustering.
I. INTRODUCTION
The main objective of this project was to determine the
easier and simple method for white blood cell (WBC)
extraction, and count the number of WBCs detected in blood
sample images. The scope of this project was to analyze on
fifty images of Blood cell having cancerous infection and
perform extraction and counting the number of WBC. It will
use clustering of each color part in the images and extracting
the affected area. To count the number of cell, we will
use grayscale intensity approach. This project will used
MATLAB image processing toolbox from Math Work.
While analysis, it was found that the affected area i.e. the
WBCs in any blood cell image has color as Dark blue, red,
violet and which can be extracted by using color based
clustering and extracting them from the rest of the image and
then counting the affected area. The foremost criteria of this
paper is counting the no. of WBC cells which helps people
in laboratory to declare if someone has blood cancer. In the
study of the blood cell images, it was found that the images
showing blood cells have WBCs as dark blue color. The k-
means clustering takes out clusters of three different colors
in the image. It makes sure that the resolution of the image is
not taken up for counting process.
A. BLOOD CELL DESCRIPTION
Blood circulatory system is one of the most important
systems in human‘s body. The function of this system is to
transport blood throughout the body. This system consists of
blood vessels which are arteries, veins, and capillaries, heart
that act as pumping system, and blood that act as the
medium for the system. Blood transportation is very
important in order to supply oxygen to our body, carries
carbon dioxide for gaseous exchange, minerals, nutrients,
and ensure healthiness. Blood cell composed of White
Blood Cells (WBCs), Red Blood Cells (RBCs), platelets,
and plasma. There are five types of WBC which are
Monocyte, Lymphocyte, Neutrophil, Basophil, and
Eusinophil. Each component in the blood cells plays their
own role in maintaining living activities and health. The
number of each element plays important role to ensure
healthiness. Lack or extreme amount of blood cells, and the
shape of RBC‘s in the body can cause disease such as
leukemia or anemia, and other medical problem. WBCs
number is important to conclude human‘s health state. This
is due to the number or quantity of this cell determined the
individual health condition and indicates diseases which
might occur. WBCs involve directly in human body defend
system. Knowledge on typical range of WBC counts in
Afro-Caribbean adults will be immediate clinical value to
physician and the WBC counts in Jamaicans are comparable
to those African origin. There are several ecological factors
that affect the result obtained which are widespread
infections, migrant populations living in the developed
countries, and social factor. Therefore, orientation value of
WBC must be obtained from their native habitat population
for accurate analysis in cell counting. Blood cells sample
International Journal of Electrical & Electronics Engineering 10 www.ijeee-apm.com
images taking from microscopic can be analyzed to count
the number of target cells by manual counting and automatic
counting. Manual counting can be very detail but might not
accurate due to human error. Meanwhile, computerized
technique using software was developed to improve the
quality of analysis. However, some problem might occur
when system failed to count WBC number precisely due to
cell overlapping with other cells. This is due to the
technique used was based on the cell size and shape.
Incomplete shape of cell in image also will cause problem to
count the cell accurately. Research need to be done to
overcome the problem by using other technique, or
improving existing technique.
B. PREVIOUS FINDINGS FOR BLOOD RELATED
DISEASES
From the clarification on pathology of blood cells, especially
on WBC, it can be said that normal quantity of WBC is
important to ensure person healthiness. Normal number of
WBC in average human adult was about 7000/micro liter,
about 1% of total blood cell in the body. Increase in the
number of WBC in the body was called leukocytosis,
while decrease in the number of WBC was called
leucopenia. Leukocytosis was most likely to occur
compared to leucopenia. The example of leukocytosis was
shown in fig(1), when excessive amount of WBC is
recognized in a sample of microscopic blood image.
The dark blue cells indicate WBC‘s, while light blue
indicates RBC‘s. From the image, it shows that WBC‘s
number was high or most likely same as the number of
RBC‘s. Meanwhile, the comparison between normal WBC
quantity and abnormal WBC numbers can be seen through
fig (2).
Fig (1): Example of Leukocytosis
Fig (2): Comparison between Normal Blood and Leukemia
C. PROPOSED METHOD
The method mentioned in this paper for WBC extraction
and counting is Color based clustering method by
focusing on image intensity level. There are several steps
needed to be done in this method to get the desired
result. fig (3) shows the block diagram of flow
processes involved in this research. It shows that this
research and study is started by importing the input
image into MATLAB workspace (m-file). Then, the
image will be transformed into grayscale image by using
specific function called grayscale conversion.
Then, the grayscale image undergoes next process by
using different techniques and functions for further
analysis. Meanwhile, for WBC extraction and counting,
it only needs contrast adjustment and function for
counting the number of WBC by referring to the number
of boundaries detected. Below figure shows the flow of
the process:
The steps involved in the processing of images are as below:
Steps for clustering
1.Read the image.
2.Convert image from rgb to lab color space.
3.Combine a&b color space i.e both the color axis while
leaving the l i.e intensity axis.
4.Convert data type to double.
5.Arrange the above data into column vector.
6.Define variable which contains total number of clusters.
7.Apply k-means clustering on the above data.
Start processing
Input cell image (choose
image from directory)
Image Enhancement
 Grayscale
Conversion
Color Based K-Means Clustering
and histogram method to analyze the
no. of colored pixels and their
intensity
Cell Counting by detecting the
affected area containing WBCs
Output (No. of cells)
www.ijeee-apm.com International Journal of Electrical & Electronics Engineering 11
8.Calculate percentage area of the infected part.
Steps for object counting
1. Read the image.
2. Extract the blue plane from the image and store it into a
variable.
3. Convert image from rgb to gray.
4. Subtract the gray scale image from extracted blue plane
image.
5. Calculate the threshold of subtracted image.
6. Convert the subtracted image into black and white image.
7. Calculate all the connected objects.
D. EVALUATION OF PROPOSED METHOD
The experiment was performed on 50 random images of
cancerous blood cells. Some of the examples of the images
are below:
Table 1: Comparison between Manual and Automatic Counting of
WBC‘s
No. Sample Manual
Counting
Automatic
Counting
1 Blood Sample Image1 2 3
2 Blood Sample Image2 6 8
3 Blood Sample Image3 2 2
4 Blood Sample Image4 12 14
5 Blood Sample Image5 16 21
6 Blood Sample Image6 71 85
7 Blood Sample Image7 2 3
8 Blood Sample Image8 17 18
9 Blood Sample Image9 6 8
10 Blood Sample Image10 6 9
11 Blood Sample Image11 3 323
12 Blood Sample Image12 6 6
13 Blood Sample Image13 8 129
14 Blood Sample Image14 3 42
15 Blood Sample Image15 Can't be
determined
66
16 Blood Sample Image16 6 6
17 Blood Sample Image17 6 6
18 Blood Sample Image18 6 6
19 Blood Sample Image19 3 3
20 Blood Sample Image20 2 60
21 Blood Sample Image21 3 72
22 Blood Sample Image22 9 9
23 Blood Sample Image23 3 3
24 Blood Sample Image24 17 17
25 Blood Sample Image25 Can't be
determined
99
26 Blood Sample Image26 11 11
27 Blood Sample Image27 3 3
28 Blood Sample Image28 8 8
29 Blood Sample Image29 5 5
30 Blood Sample Image30 20 20
31 Blood Sample Image31 12 12
32 Blood Sample Image32 4 4
33 Blood Sample Image33 16 16
34 Blood Sample Image34 11 11
35 Blood Sample Image35 8 8
36 Blood Sample Image36 3 3
37 Blood Sample Image37 20 20
38 Blood Sample Image38 4 4
39 Blood Sample Image40 5 6
40 Blood Sample Imag40 Can't be
determined
100
41 Blood Sample Image41 3 3
42 Blood Sample Image42 2 2
43 Blood Sample Image43 20 20
44 Blood Sample Image44 8 8
45 Blood Sample Image45 4 11
46 Blood Sample Image46 2 3
47 Blood Sample Image47 3 3
48 Blood Sample Image48 Can't be
determined
110
49 Blood Sample Image49 2 2
International Journal of Electrical & Electronics Engineering 12 www.ijeee-apm.com
50 Blood Sample Image 50 3 3
E. RESULTS & CONCLUSIONS
With the implementation of proposed method, we get the
results which calculates the minimum number of pixels
detected because there can be huge no. of RBCs, fluid and
WBCs and the percentage of RBCs & fluid in the complete
cell would be more than the WBCs in the image. So, when
calculating the cancerous area, it would be the minimum of
the overall area covered by colored pixels. The proposed
method can be very helpful in diagnosing the blood cancer at
early stage. This method is generalized to detect cancer at
initial stage wherein cancerous cells would be lesser. So,
here we conclude the results achieved:
1. Number of cells counted manually are same in some of
the case because the images are clear and the cells are
prominent in size to be captured by human eyes.
2. Number of cells are not same in some of the case where
the images do not have WBCs defined in prominent size.
They cannot be detected and extracted through naked eyes.
Hence, the one detected by color based clustering are actual
count of WBC Cells.
REFERENCES
[1] Data clustering: a reviewAK Jain, MN Murty, PJ Flynn -
ACM computing surveys (CSUR), 1999 - dl.acm.org
[2] An efficient k-means clustering algorithm : K Alsabti, S
Ranka, V Singh - 1997 - surface.syr.edu
[3] Mathematical classification and clustering: From how to what
and why : B Mirkin - 1998 - Springer
[4] Feature weighting in k-means clustering: DS Modha, WS
Spangler - Machine learning, 2003 - Springer
[5] Constrained clustering: Advances in algorithms, theory, and
applications : S Basu, I Davidson, K Wagstaff - 2008
[6] A large scale clustering scheme for kernel k-means: R Zhang,
AI Rudnicky - Pattern Recognition, 2002. …, 2002 -
ieeexplore.ieee.org
[7] Clustering methods for collaborative filtering: LH Ungar, DP
Foster - AAAI Workshop on Recommendation Systems, 1998
- aaai.org
[8] A contiguity-enhanced k-means clustering algorithm for
unsupervised multispectral image segmentation: J Theiler, G
Gisler - Proc. SPIE, 1997 - reviews.spiedigitallibrary.org
[9] An evolutionary technique based on K-means algorithm for
optimal clustering in RN: S Bandyopadhyay, U Maulik -
Information Sciences, 2002 – Elsevier.

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DETECTING AND COUNTING THE NO. OF WHITE BLOOD CELLS IN BLOOD SAMPLE IMAGES BY COLOR BASED K-MEANS CLUSTERING

  • 1. www.ijeee-apm.com International Journal of Electrical & Electronics Engineering 9 IJEEE, Vol. 1, Issue 3 (June, 2014) e-ISSN: 1694-2310 | p-ISSN: 1694-2426 DETECTING AND COUNTING THE NO. OF WHITE BLOOD CELLS IN BLOOD SAMPLE IMAGES BY COLOR BASED K-MEANS CLUSTERING 1 Neha Sharma, 2 Nishant Kinra 1 Indira Gandhi Delhi Technical University for Women, New Delhi, India 2 Deenbandhu Chhotu Ram University of Science and Technology, Haryana, India 1 neha.sksharma@yahoo.co.in, 2 nishant.kinra@gmail.com Abstract- Nowadays, many diseases which were incurable to human become the main topic in every country. Solemn illness that becomes killer to mankind was the kind that cannot be detect early, no early symptoms, and can spread throughout the body without notice. Sometimes, it can only be realized after critical conditions. This kind of disease was incurable and cause death to the infected person. One of the challenges in medical science is to detect and identify diseases for early detection by medical imaging technology. Medical imaging modalities such as X- Ray, Computed Tomography (CT) Scan, Magnetic Resonance Imaging (MRI), and Ultrasound produce medical image captured from human body arrangement for analysis and diagnosis. In addition, analysis in medical field for diagnosis was done by counting cells from microscopic images. Moreover, blood related diseases such as anemia or leukemia due to lack or extreme production of blood cells also become serious illness which causes death. Early discovery of these diseases needs to be done to reduce death rate. One of the technologies used to solve the problem is by image processing. However, this method required knowledge and ability to apply many different methods in an analysis. Therefore, a simple and easy method needs to be identified to help clinician. Index Terms- Blood cancer detection, Color based clustering, WBC Count, K-means clustering. I. INTRODUCTION The main objective of this project was to determine the easier and simple method for white blood cell (WBC) extraction, and count the number of WBCs detected in blood sample images. The scope of this project was to analyze on fifty images of Blood cell having cancerous infection and perform extraction and counting the number of WBC. It will use clustering of each color part in the images and extracting the affected area. To count the number of cell, we will use grayscale intensity approach. This project will used MATLAB image processing toolbox from Math Work. While analysis, it was found that the affected area i.e. the WBCs in any blood cell image has color as Dark blue, red, violet and which can be extracted by using color based clustering and extracting them from the rest of the image and then counting the affected area. The foremost criteria of this paper is counting the no. of WBC cells which helps people in laboratory to declare if someone has blood cancer. In the study of the blood cell images, it was found that the images showing blood cells have WBCs as dark blue color. The k- means clustering takes out clusters of three different colors in the image. It makes sure that the resolution of the image is not taken up for counting process. A. BLOOD CELL DESCRIPTION Blood circulatory system is one of the most important systems in human‘s body. The function of this system is to transport blood throughout the body. This system consists of blood vessels which are arteries, veins, and capillaries, heart that act as pumping system, and blood that act as the medium for the system. Blood transportation is very important in order to supply oxygen to our body, carries carbon dioxide for gaseous exchange, minerals, nutrients, and ensure healthiness. Blood cell composed of White Blood Cells (WBCs), Red Blood Cells (RBCs), platelets, and plasma. There are five types of WBC which are Monocyte, Lymphocyte, Neutrophil, Basophil, and Eusinophil. Each component in the blood cells plays their own role in maintaining living activities and health. The number of each element plays important role to ensure healthiness. Lack or extreme amount of blood cells, and the shape of RBC‘s in the body can cause disease such as leukemia or anemia, and other medical problem. WBCs number is important to conclude human‘s health state. This is due to the number or quantity of this cell determined the individual health condition and indicates diseases which might occur. WBCs involve directly in human body defend system. Knowledge on typical range of WBC counts in Afro-Caribbean adults will be immediate clinical value to physician and the WBC counts in Jamaicans are comparable to those African origin. There are several ecological factors that affect the result obtained which are widespread infections, migrant populations living in the developed countries, and social factor. Therefore, orientation value of WBC must be obtained from their native habitat population for accurate analysis in cell counting. Blood cells sample
  • 2. International Journal of Electrical & Electronics Engineering 10 www.ijeee-apm.com images taking from microscopic can be analyzed to count the number of target cells by manual counting and automatic counting. Manual counting can be very detail but might not accurate due to human error. Meanwhile, computerized technique using software was developed to improve the quality of analysis. However, some problem might occur when system failed to count WBC number precisely due to cell overlapping with other cells. This is due to the technique used was based on the cell size and shape. Incomplete shape of cell in image also will cause problem to count the cell accurately. Research need to be done to overcome the problem by using other technique, or improving existing technique. B. PREVIOUS FINDINGS FOR BLOOD RELATED DISEASES From the clarification on pathology of blood cells, especially on WBC, it can be said that normal quantity of WBC is important to ensure person healthiness. Normal number of WBC in average human adult was about 7000/micro liter, about 1% of total blood cell in the body. Increase in the number of WBC in the body was called leukocytosis, while decrease in the number of WBC was called leucopenia. Leukocytosis was most likely to occur compared to leucopenia. The example of leukocytosis was shown in fig(1), when excessive amount of WBC is recognized in a sample of microscopic blood image. The dark blue cells indicate WBC‘s, while light blue indicates RBC‘s. From the image, it shows that WBC‘s number was high or most likely same as the number of RBC‘s. Meanwhile, the comparison between normal WBC quantity and abnormal WBC numbers can be seen through fig (2). Fig (1): Example of Leukocytosis Fig (2): Comparison between Normal Blood and Leukemia C. PROPOSED METHOD The method mentioned in this paper for WBC extraction and counting is Color based clustering method by focusing on image intensity level. There are several steps needed to be done in this method to get the desired result. fig (3) shows the block diagram of flow processes involved in this research. It shows that this research and study is started by importing the input image into MATLAB workspace (m-file). Then, the image will be transformed into grayscale image by using specific function called grayscale conversion. Then, the grayscale image undergoes next process by using different techniques and functions for further analysis. Meanwhile, for WBC extraction and counting, it only needs contrast adjustment and function for counting the number of WBC by referring to the number of boundaries detected. Below figure shows the flow of the process: The steps involved in the processing of images are as below: Steps for clustering 1.Read the image. 2.Convert image from rgb to lab color space. 3.Combine a&b color space i.e both the color axis while leaving the l i.e intensity axis. 4.Convert data type to double. 5.Arrange the above data into column vector. 6.Define variable which contains total number of clusters. 7.Apply k-means clustering on the above data. Start processing Input cell image (choose image from directory) Image Enhancement  Grayscale Conversion Color Based K-Means Clustering and histogram method to analyze the no. of colored pixels and their intensity Cell Counting by detecting the affected area containing WBCs Output (No. of cells)
  • 3. www.ijeee-apm.com International Journal of Electrical & Electronics Engineering 11 8.Calculate percentage area of the infected part. Steps for object counting 1. Read the image. 2. Extract the blue plane from the image and store it into a variable. 3. Convert image from rgb to gray. 4. Subtract the gray scale image from extracted blue plane image. 5. Calculate the threshold of subtracted image. 6. Convert the subtracted image into black and white image. 7. Calculate all the connected objects. D. EVALUATION OF PROPOSED METHOD The experiment was performed on 50 random images of cancerous blood cells. Some of the examples of the images are below: Table 1: Comparison between Manual and Automatic Counting of WBC‘s No. Sample Manual Counting Automatic Counting 1 Blood Sample Image1 2 3 2 Blood Sample Image2 6 8 3 Blood Sample Image3 2 2 4 Blood Sample Image4 12 14 5 Blood Sample Image5 16 21 6 Blood Sample Image6 71 85 7 Blood Sample Image7 2 3 8 Blood Sample Image8 17 18 9 Blood Sample Image9 6 8 10 Blood Sample Image10 6 9 11 Blood Sample Image11 3 323 12 Blood Sample Image12 6 6 13 Blood Sample Image13 8 129 14 Blood Sample Image14 3 42 15 Blood Sample Image15 Can't be determined 66 16 Blood Sample Image16 6 6 17 Blood Sample Image17 6 6 18 Blood Sample Image18 6 6 19 Blood Sample Image19 3 3 20 Blood Sample Image20 2 60 21 Blood Sample Image21 3 72 22 Blood Sample Image22 9 9 23 Blood Sample Image23 3 3 24 Blood Sample Image24 17 17 25 Blood Sample Image25 Can't be determined 99 26 Blood Sample Image26 11 11 27 Blood Sample Image27 3 3 28 Blood Sample Image28 8 8 29 Blood Sample Image29 5 5 30 Blood Sample Image30 20 20 31 Blood Sample Image31 12 12 32 Blood Sample Image32 4 4 33 Blood Sample Image33 16 16 34 Blood Sample Image34 11 11 35 Blood Sample Image35 8 8 36 Blood Sample Image36 3 3 37 Blood Sample Image37 20 20 38 Blood Sample Image38 4 4 39 Blood Sample Image40 5 6 40 Blood Sample Imag40 Can't be determined 100 41 Blood Sample Image41 3 3 42 Blood Sample Image42 2 2 43 Blood Sample Image43 20 20 44 Blood Sample Image44 8 8 45 Blood Sample Image45 4 11 46 Blood Sample Image46 2 3 47 Blood Sample Image47 3 3 48 Blood Sample Image48 Can't be determined 110 49 Blood Sample Image49 2 2
  • 4. International Journal of Electrical & Electronics Engineering 12 www.ijeee-apm.com 50 Blood Sample Image 50 3 3 E. RESULTS & CONCLUSIONS With the implementation of proposed method, we get the results which calculates the minimum number of pixels detected because there can be huge no. of RBCs, fluid and WBCs and the percentage of RBCs & fluid in the complete cell would be more than the WBCs in the image. So, when calculating the cancerous area, it would be the minimum of the overall area covered by colored pixels. The proposed method can be very helpful in diagnosing the blood cancer at early stage. This method is generalized to detect cancer at initial stage wherein cancerous cells would be lesser. So, here we conclude the results achieved: 1. Number of cells counted manually are same in some of the case because the images are clear and the cells are prominent in size to be captured by human eyes. 2. Number of cells are not same in some of the case where the images do not have WBCs defined in prominent size. They cannot be detected and extracted through naked eyes. Hence, the one detected by color based clustering are actual count of WBC Cells. REFERENCES [1] Data clustering: a reviewAK Jain, MN Murty, PJ Flynn - ACM computing surveys (CSUR), 1999 - dl.acm.org [2] An efficient k-means clustering algorithm : K Alsabti, S Ranka, V Singh - 1997 - surface.syr.edu [3] Mathematical classification and clustering: From how to what and why : B Mirkin - 1998 - Springer [4] Feature weighting in k-means clustering: DS Modha, WS Spangler - Machine learning, 2003 - Springer [5] Constrained clustering: Advances in algorithms, theory, and applications : S Basu, I Davidson, K Wagstaff - 2008 [6] A large scale clustering scheme for kernel k-means: R Zhang, AI Rudnicky - Pattern Recognition, 2002. …, 2002 - ieeexplore.ieee.org [7] Clustering methods for collaborative filtering: LH Ungar, DP Foster - AAAI Workshop on Recommendation Systems, 1998 - aaai.org [8] A contiguity-enhanced k-means clustering algorithm for unsupervised multispectral image segmentation: J Theiler, G Gisler - Proc. SPIE, 1997 - reviews.spiedigitallibrary.org [9] An evolutionary technique based on K-means algorithm for optimal clustering in RN: S Bandyopadhyay, U Maulik - Information Sciences, 2002 – Elsevier.