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GraphFrames: Graph
Queries in Spark SQL
Ankur Dave
UC BerkeleyAMPLab
Joint work with Alekh Jindal (Microsoft), Li ErranLi (Uber),
Joseph Gonzalez(UC Berkeley),Matei Zaharia (MIT and Databricks)
+ Graph
Queries
2016
Spark + GraphFrames
Support for Graph Analysis in Spark
+ Graph
Algorithms
2013
Spark + GraphX
Relational
Queries
2009
Spark
Graph Updates +
Anchored
Traversals
Neo4j, etc.
Graph Algorithms vs. Graph Queries
≈
x
PageRank
Alternating Least Squares
Graph Algorithms Graph Queries
Graph Algorithms vs. Graph Queries
Graph Algorithm: PageRank Graph Query: Wikipedia Collaborators
Editor 1 Editor 2 Article 1 Article 2
⇓
Article 1
Article 2
Editor 1
Editor 2
same day} same day}
Graph Algorithms vs. Graph Queries
Graph Algorithm: PageRank
// Iterate until convergence
wikipedia.pregel(
sendMsg = { e =>
e.sendToDst(e.srcRank * e.weight)
},
mergeMsg = _ + _,
vprog = { (id, oldRank, msgSum) =>
0.15 + 0.85 * msgSum
})
Graph Query: Wikipedia Collaborators
wikipedia.find(
"(u1)-[e11]->(article1);
(u2)-[e21]->(article1);
(u1)-[e12]->(article2);
(u2)-[e22]->(article2)")
.select(
"*",
"e11.date – e21.date".as("d1"),
"e12.date – e22.date".as("d2"))
.sort("d1 + d2".desc).take(10)
Separate Systems
Graph Algorithms Graph Queries
Raw Wikipedia
< / >< / >< / >
XML
Text Table
Edit Graph
Edit Table
Frequent
Collaborators
Problem: Mixed Graph Analysis
Hyperlinks PageRank
User Product
User Article
Vandalism
Suspects
User User
User Article
Solution: GraphFrames
Graph Algorithms Graph Queries
Spark SQL
GraphFramesAPI
Pattern Query
Optimizer
GraphFrames API
• Unifies graph algorithms, graph queries, and DataFrames
• Available in Scala and Python
class GraphFrame {
def vertices: DataFrame
def edges: DataFrame
def find(pattern: String): DataFrame
def registerView(pattern: String, df: DataFrame): Unit
def degrees(): DataFrame
def pageRank(): GraphFrame
def connectedComponents(): GraphFrame
...
}
Implementation
Parsed
Pattern
Logical Plan
Materialized
Views
Optimized
Logical Plan
DataFrame
Result
Query String
Graph–Relational
Translation Join Elimination
and Reordering
Spark SQL
View Selection
Graph
Algorithms
GraphX
Graph–Relational Translation
B
D
A
C
Existing
Logical Plan
Output: A,B,C
Src Dst
⋈C=Src
Edge Table
ID Attr
VertexTable
⋈D=ID
Materialized View Selection
GraphX: Triplet view enables efficient message-passing algorithms
Vertices
B
A
C
D
Edges
A B
A C
B C
C D
A
B
Triplet View
A C
B C
C D
Graph
+
Updated
PageRanks
B
A
C
D
A
Materialized View Selection
GraphFrames: User-defined views enable efficient graph queries
Vertices
B
A
C
D
Edges
A B
A C
B C
C D
A
B
Triplet View
A C
B C
C D
Graph
User-Defined Views
PageRank
Community
Detection
…
Graph Queries
Join Elimination
Src Dst
1 2
1 3
2 3
2 5
Edges
ID Attr
1 A
2 B
3 C
4 D
Vertices
SELECT src, dst, attr AS src_attr
FROM edges INNER JOIN vertices ON src = id;
Standard vertex-edgejoin:
SELECT src, dst
FROM edges INNER JOIN vertices ON src = id;
Unnecessaryjoin
can be eliminated if tables satisfy referential
integrity, simplifying graph–relational
translation
Join Reordering
A → B B → A
⋈A, B
B → D
C → B⋈B
B → E⋈B
C → D⋈B
C → E⋈C, D
⋈C, E
Example Query
Left-Deep Plan BushyPlan
A → B B → A
⋈A, B
B → D C → B
⋈B
B → E⋈B
⋈B
⋈B, C
User-Defined View
Evaluation
Faster than Neo4j for unanchored patternqueries
0
0.5
1
1.5
2
2.5
GraphFrames Neo4j
Querylatency,s
AnchoredPatternQuery
0
10
20
30
40
50
60
70
80
GraphFrames Neo4j
Querylatency,s
UnanchoredPatternQuery
Triangle query on 1M edge subgraph of web-Google. Each system configured touse a single core.
Evaluation
Approaches performance of GraphX for graph algorithms using Spark SQL
whole-stage code generation
0
1
2
3
4
5
6
7
GraphFrames GraphX Naïve Spark
Per-iterationruntime,s
PageRankPerformance
Per-iteration performance on web-Google, single 8-core machine. Naïve SparkusesScala RDD API.
Evaluation
Registering the right views cangreatlyimprove performance
Future Work
• Suggest views automatically
• Exploit attribute-based partitioning in optimizer
• Code generationfor single node
Try It Out!
Preview available for Spark 1.4+ at:
https://github.com/graphframes/graphframes
Thanks to Databricks contributors Joseph Bradley,Xiangrui Meng,and Timothy Hunter.
Watch for the release on Spark Packages in the coming weeks.
ankurd@eecs.berkeley.edu

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GraphFrames: Graph Queries in Spark SQL by Ankur Dave

  • 1. GraphFrames: Graph Queries in Spark SQL Ankur Dave UC BerkeleyAMPLab Joint work with Alekh Jindal (Microsoft), Li ErranLi (Uber), Joseph Gonzalez(UC Berkeley),Matei Zaharia (MIT and Databricks)
  • 2. + Graph Queries 2016 Spark + GraphFrames Support for Graph Analysis in Spark + Graph Algorithms 2013 Spark + GraphX Relational Queries 2009 Spark Graph Updates + Anchored Traversals Neo4j, etc.
  • 3. Graph Algorithms vs. Graph Queries ≈ x PageRank Alternating Least Squares Graph Algorithms Graph Queries
  • 4. Graph Algorithms vs. Graph Queries Graph Algorithm: PageRank Graph Query: Wikipedia Collaborators Editor 1 Editor 2 Article 1 Article 2 ⇓ Article 1 Article 2 Editor 1 Editor 2 same day} same day}
  • 5. Graph Algorithms vs. Graph Queries Graph Algorithm: PageRank // Iterate until convergence wikipedia.pregel( sendMsg = { e => e.sendToDst(e.srcRank * e.weight) }, mergeMsg = _ + _, vprog = { (id, oldRank, msgSum) => 0.15 + 0.85 * msgSum }) Graph Query: Wikipedia Collaborators wikipedia.find( "(u1)-[e11]->(article1); (u2)-[e21]->(article1); (u1)-[e12]->(article2); (u2)-[e22]->(article2)") .select( "*", "e11.date – e21.date".as("d1"), "e12.date – e22.date".as("d2")) .sort("d1 + d2".desc).take(10)
  • 7. Raw Wikipedia < / >< / >< / > XML Text Table Edit Graph Edit Table Frequent Collaborators Problem: Mixed Graph Analysis Hyperlinks PageRank User Product User Article Vandalism Suspects User User User Article
  • 8. Solution: GraphFrames Graph Algorithms Graph Queries Spark SQL GraphFramesAPI Pattern Query Optimizer
  • 9. GraphFrames API • Unifies graph algorithms, graph queries, and DataFrames • Available in Scala and Python class GraphFrame { def vertices: DataFrame def edges: DataFrame def find(pattern: String): DataFrame def registerView(pattern: String, df: DataFrame): Unit def degrees(): DataFrame def pageRank(): GraphFrame def connectedComponents(): GraphFrame ... }
  • 10. Implementation Parsed Pattern Logical Plan Materialized Views Optimized Logical Plan DataFrame Result Query String Graph–Relational Translation Join Elimination and Reordering Spark SQL View Selection Graph Algorithms GraphX
  • 11. Graph–Relational Translation B D A C Existing Logical Plan Output: A,B,C Src Dst ⋈C=Src Edge Table ID Attr VertexTable ⋈D=ID
  • 12. Materialized View Selection GraphX: Triplet view enables efficient message-passing algorithms Vertices B A C D Edges A B A C B C C D A B Triplet View A C B C C D Graph + Updated PageRanks B A C D A
  • 13. Materialized View Selection GraphFrames: User-defined views enable efficient graph queries Vertices B A C D Edges A B A C B C C D A B Triplet View A C B C C D Graph User-Defined Views PageRank Community Detection … Graph Queries
  • 14. Join Elimination Src Dst 1 2 1 3 2 3 2 5 Edges ID Attr 1 A 2 B 3 C 4 D Vertices SELECT src, dst, attr AS src_attr FROM edges INNER JOIN vertices ON src = id; Standard vertex-edgejoin: SELECT src, dst FROM edges INNER JOIN vertices ON src = id; Unnecessaryjoin can be eliminated if tables satisfy referential integrity, simplifying graph–relational translation
  • 15. Join Reordering A → B B → A ⋈A, B B → D C → B⋈B B → E⋈B C → D⋈B C → E⋈C, D ⋈C, E Example Query Left-Deep Plan BushyPlan A → B B → A ⋈A, B B → D C → B ⋈B B → E⋈B ⋈B ⋈B, C User-Defined View
  • 16. Evaluation Faster than Neo4j for unanchored patternqueries 0 0.5 1 1.5 2 2.5 GraphFrames Neo4j Querylatency,s AnchoredPatternQuery 0 10 20 30 40 50 60 70 80 GraphFrames Neo4j Querylatency,s UnanchoredPatternQuery Triangle query on 1M edge subgraph of web-Google. Each system configured touse a single core.
  • 17. Evaluation Approaches performance of GraphX for graph algorithms using Spark SQL whole-stage code generation 0 1 2 3 4 5 6 7 GraphFrames GraphX Naïve Spark Per-iterationruntime,s PageRankPerformance Per-iteration performance on web-Google, single 8-core machine. Naïve SparkusesScala RDD API.
  • 18. Evaluation Registering the right views cangreatlyimprove performance
  • 19. Future Work • Suggest views automatically • Exploit attribute-based partitioning in optimizer • Code generationfor single node
  • 20. Try It Out! Preview available for Spark 1.4+ at: https://github.com/graphframes/graphframes Thanks to Databricks contributors Joseph Bradley,Xiangrui Meng,and Timothy Hunter. Watch for the release on Spark Packages in the coming weeks. ankurd@eecs.berkeley.edu