The document discusses the GOR method for predicting secondary structure of proteins. GOR assumes amino acids up to 8 residues on each side influence the central residue's secondary structure. It determines frequencies of amino acids in the central position and positions -8 to -1 and +1 to +8 for alpha, beta, and turns. It calculates a score for the central residue being one secondary structure type. The accuracy of GOR is 64%.

1. NAME:S.SUBASRIVAISH
NAVI
REG NO:20UMB020
TOPIC:GOR METHOD

2. GOR-GARNIER OSGUTHROPE
ROBOSON
It is an information theory based
method for the prediction of
secondary structure of protein

3. Assumes amino acids upto 8 residues on each side
influence the ss of the central residue
Frequencies of the amino acid in the central
posistion the window and at -1…,-8 and+1…,+8
determined for alpha and beta turns
Calculate the score that the central residue is one
type of ss
The accuracy is 64%