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![IBM | spark.tc
Parquet Data Source
Configuration
spark.sql.parquet.filterPushdown=true
spark.sql.parquet.mergeSchema=true
spark.sql.parquet.cacheMetadata=true
spark.sql.parquet.compression.codec=[uncompressed,snappy,gzip,lzo]
DataFrames
val gendersDF = sqlContext.read.format("parquet")
.load("file:/root/pipeline/datasets/dating/genders.parquet")
gendersDF.write.format("parquet").partitionBy("gender")
.save("file:/root/pipeline/datasets/dating/genders.parquet")
SQL
CREATE TABLE genders USING parquet
OPTIONS
(path "file:/root/pipeline/datasets/dating/genders.parquet")](https://image.slidesharecdn.com/cassandrasummitsept2015sparkafterdark-150923230637-lva1-app6891/75/Cassandra-Summit-Sept-2015-Real-Time-Advanced-Analytics-with-Spark-and-Cassandra-Recommendations-Machine-Learning-Graph-Processing-29-2048.jpg)
Uploaded byChris Fregly
Cassandra Summit Sept 2015 - Real Time Advanced Analytics with Spark and Cassandra Recommendations Machine Learning Graph Processing
The document presents a talk by Chris Fregly from IBM about real-time advanced analytics with Apache Spark and Cassandra, covering various topics such as recommendations, dataframes, and the Catalyst optimizer. It includes details about meetups, audience interaction, and a live demo for generating dating recommendations using machine learning techniques. Additionally, it discusses performance tuning techniques and provides information on creating custom data sources and integrating with various databases.
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Cassandra Summit Sept 2015 - Real Time Advanced Analytics with Spark and Cassandra Recommendations Machine Learning Graph Processing
- 1. IBM | spark.tc CassandraSummit 2015 Real time Advanced Analytics with Spark and Cassandra Chris Fregly, Principal Data Solutions Engineer IBM Spark Technology Center Sept 24, 2015 Power of data. Simplicity of design. Speed of innovation.
- 2. IBM | spark.tc Whoam I? Streaming Platform Engineer Not a Photographer or Model Streaming Data Engineer Netflix Open Source Committer Data Solutions Engineer Apache Contributor Principal Data Solutions Engineer IBM Technology Center
- 3. IBM | spark.tc AdvancedApache Spark Meetup (Organizer) Total Spark Experts: ~1000 Mean RSVPs per Meetup: ~300 Mean Attendance: ~50-60% of RSVPs I’m lucky to work for a company/boss that let’s me do this full-time! Come work with me! We’ll kick ass!
- 4. IBM | spark.tc Recentand Future Meetups Spark-Cassandra Connector w/ Russell Spitzer (DataStax) & Me Sept 21st, 2015 <-- Great turnout and interesting questions! Project Tungsten Data Structs+Algos: CPU & Memory Optimizations Nov 12th, 2015 Text-based Advanced Analytics and Machine Learning Jan 14th, 2016 ElasticSearch-Spark Connector w/ Costin Leau (Elastic.co) & Me Feb 16th, 2016 Spark Internals Deep Dive Mar 24th, 2016 Spark SQL Catalyst Optimizer Deep Dive Apr 21st, 2016
- 5. IBM | spark.tc Topicsof this Talk ① Recommendations ② Live Interactice Demo! ③ DataFrames ④ Catalyst Optimizer and Query Plans ⑤ Data Sources API ⑥ Creating and Contributing Custom Data Source ① Partitions, Pruning, Pushdowns ① Native + Third-Party Data Source Impls ① Spark SQL Performance Tuning
- 6. Live, Interactive Demo! SparkAfter Dark Generating High-Quality Dating Recommendations Real-time Advanced Analytics Machine Learning, Graph Processing
- 7. IBM | spark.tc Recommendations Non-Personalized “ColdStart” Problem Top K PageRank Personalized User-User, User-Item, Item-Item Collaborative Filtering
- 8. IBM | spark.tc Typesof User Feedback Explicit ratings, likes Implicit searches, clicks, hovers, views, scrolls, pauses Used to train models for future recommendations
- 9. IBM | spark.tc Similarity ①Euclidean:linear measure Suffers from magnitude bias ②Cosine: angle measure Adjust for magnitude bias ③Jaccard: Set intersection / union Suffers from popularity bias ④Log Likelihood Adjust for popularity bias Ali Matei Reynold Patrick Andy Kimberly 1 1 1 1 Leslie 1 1 Meredith 1 1 1 Lisa 1 1 1 Holden 1 1 1 1 1
- 10. IBM | spark.tc ComparingSimilarity All-pairs Similarity aka. Pair-wise Similarity, Similarity join Naïve Implementation O(m * n^2) shuffle; m = rows, n = cols Clever Approximate Reduce m: Sampling and bucketing Reduce n: Sparse matrix, factor out frequent vals (0?) Locality Sensitive Hashing
- 11. IBM | spark.tc AudienceParticipation Required!! Instructions for you ①Navigate to sparkafterdark.com ②Click on 3 actors & 3 actresses -> You are here -> github.com/fluxcapacitor/ hub.docker.com/r/fluxcapacitor/pipeline/
- 12. IBM | spark.tc DataFrames Inspiredby R and Pandas DataFrames Cross language support SQL, Python, Scala, Java, R Levels performance of Python, Scala, Java, and R Generates JVM bytecode vs serialize/pickle objects to Python DataFrame is Container for Logical Plan Transformations are lazy and represented as a tree Catalyst Optimizer creates physical plan DataFrame.rdd returns the underlying RDD if needed Custom UDF using registerFunction() New, experimental UDAF support Use DataFrames instead of RDDs!!
- 13. IBM | spark.tc CatalystOptimizer Converts logical plan to physical plan Manipulate & optimize DataFrame transformation tree Subquery elimination – use aliases to collapse subqueries Constant folding – replace expression with constant Simplify filters – remove unnecessary filters Predicate/filter pushdowns – avoid unnecessary data load Projection collapsing – avoid unnecessary projections Hooks for custom rules Rules = Scala Case Classes val newPlan = MyFilterRule(analyzedPlan) Implements oas.sql.catalyst.rules.Rule Apply to any plan stage
- 14. IBM | spark.tc PlanDebugging gendersCsvDF.select($"id", $"gender").filter("gender != 'F'").filter("gender != 'M'").explain(true) Requires explain(true) DataFrame.queryExecution.logical DataFrame.queryExecution.analyzed DataFrame.queryExecution.optimizedPlan DataFrame.queryExecution.executedPlan
- 15. IBM | spark.tc PlanVisualization & Join/Aggregation Metrics Effectiveness of Filter Cost-based Optimization is Applied Peak Memory for Joins and Aggs Optimized CPU-cache-aware Binary Format Minimizes GC & Improves Join Perf (Project Tungsten) New in Spark 1.5!
- 16. IBM | spark.tc DataSources API Execution (o.a.s.sql.execution.commands.scala) RunnableCommand (trait/interface) ExplainCommand(impl: case class) CacheTableCommand(impl: case class) Relations (o.a.s.sql.sources.interfaces.scala) BaseRelation (abstract class) TableScan (impl: returns all rows) PrunedFilteredScan (impl: column pruning and predicate pushdown) InsertableRelation (impl: insert or overwrite data using SaveMode) Filters (o.a.s.sql.sources.filters.scala) Filter (abstract class for all filter pushdowns for this data source) EqualTo GreaterThan StringStartsWith
- 17. IBM | spark.tc Creatinga Custom Data Source Study Existing Native and Third-Party Data Source Impls Native: JDBC (o.a.s.sql.execution.datasources.jdbc) class JDBCRelation extends BaseRelation with PrunedFilteredScan with InsertableRelation Third-Party: Cassandra (o.a.s.sql.cassandra) class CassandraSourceRelation extends BaseRelation with PrunedFilteredScan with InsertableRelation
- 18. IBM | spark.tc Contributinga Custom Data Source spark-packages.org Managed by Contains links to externally-managed github projects Ratings and comments Spark version requirements of each package Examples https://github.com/databricks/spark-csv https://github.com/databricks/spark-avro https://github.com/databricks/spark-redshift
- 19.
- 20. IBM | spark.tc DemoDataset (from previous Spark After Dark talks) RATINGS ======== UserID,ProfileID,Rating (1-10) GENDERS ======== UserID,Gender (M,F,U) <-- Totally --> Anonymous
- 21. IBM | spark.tc Partitions Partitionbased on data usage patterns /genders.parquet/gender=M/… /gender=F/… <-- Use case: access users by gender /gender=U/… Partition Discovery On read, infer partitions from organization of data (ie. gender=F) Dynamic Partitions Upon insert, dynamically create partitions Specify field to use for each partition (ie. gender) SQL: INSERT TABLE genders PARTITION (gender) SELECT … DF: gendersDF.write.format(”parquet").partitionBy(”gender”).save(…)
- 22. IBM | spark.tc Pruning PartitionPruning Filter out entire partitions of rows on partitioned data SELECT id, gender FROM genders where gender = ‘U’ Column Pruning Filter out entire columns for all rows if not required Extremely useful for columnar storage formats Parquet, ORC SELECT id, gender FROM genders
- 23. IBM | spark.tc Pushdowns Predicate(aka Filter) Pushdowns Predicate returns {true, false} for a given function/condition Filters rows as deep into the data source as possible Data Source must implement PrunedFilteredScan
- 24. IBM | spark.tc CassandraPushdown Rules Determines which filter predicates can be pushed down to Cassandra. * 1. Only push down no-partition key column predicates with =, >, <, >=, <= predicate * 2. Only push down primary key column predicates with = or IN predicate. * 3. If there are regular columns in the pushdown predicates, they should have * at least one EQ expression on an indexed column and no IN predicates. * 4. All partition column predicates must be included in the predicates to be pushed down, * only the last part of the partition key can be an IN predicate. For each partition column, * only one predicate is allowed. * 5. For cluster column predicates, only last predicate can be non-EQ predicate * including IN predicate, and preceding column predicates must be EQ predicates. * If there is only one cluster column predicate, the predicates could be any non-IN predicate. * 6. There is no pushdown predicates if there is any OR condition or NOT IN condition. * 7. We're not allowed to push down multiple predicates for the same column if any of them * is equality or IN predicate. spark-cassandra-connector/…/o.a.s.sql.cassandra.PredicatePushDown.scala
- 25. Native Spark SQLData Sources
- 26. IBM | spark.tc SparkSQL Native Data Sources - Source Code
- 27. IBM | spark.tc JSONData Source DataFrame val ratingsDF = sqlContext.read.format("json") .load("file:/root/pipeline/datasets/dating/ratings.json.bz2") -- or -- val ratingsDF = sqlContext.read.json ("file:/root/pipeline/datasets/dating/ratings.json.bz2") SQL Code CREATE TABLE genders USING json OPTIONS (path "file:/root/pipeline/datasets/dating/genders.json.bz2") Convenience Method
- 28. IBM | spark.tc JDBCData Source Add Driver to Spark JVM System Classpath $ export SPARK_CLASSPATH=<jdbc-driver.jar> DataFrame val jdbcConfig = Map("driver" -> "org.postgresql.Driver", "url" -> "jdbc:postgresql:hostname:port/database", "dbtable" -> ”schema.tablename") df.read.format("jdbc").options(jdbcConfig).load() SQL CREATE TABLE genders USING jdbc OPTIONS (url, dbtable, driver, …)
- 29. IBM | spark.tc ParquetData Source Configuration spark.sql.parquet.filterPushdown=true spark.sql.parquet.mergeSchema=true spark.sql.parquet.cacheMetadata=true spark.sql.parquet.compression.codec=[uncompressed,snappy,gzip,lzo] DataFrames val gendersDF = sqlContext.read.format("parquet") .load("file:/root/pipeline/datasets/dating/genders.parquet") gendersDF.write.format("parquet").partitionBy("gender") .save("file:/root/pipeline/datasets/dating/genders.parquet") SQL CREATE TABLE genders USING parquet OPTIONS (path "file:/root/pipeline/datasets/dating/genders.parquet")
- 30. IBM | spark.tc ORCData Source Configuration spark.sql.orc.filterPushdown=true DataFrames val gendersDF = sqlContext.read.format("orc") .load("file:/root/pipeline/datasets/dating/genders") gendersDF.write.format("orc").partitionBy("gender") .save("file:/root/pipeline/datasets/dating/genders") SQL CREATE TABLE genders USING orc OPTIONS (path "file:/root/pipeline/datasets/dating/genders")
- 31.
- 32. IBM | spark.tc CSVData Source (Databricks) Github https://github.com/databricks/spark-csv Maven com.databricks:spark-csv_2.10:1.2.0 Code val gendersCsvDF = sqlContext.read .format("com.databricks.spark.csv") .load("file:/root/pipeline/datasets/dating/gender.csv.bz2") .toDF("id", "gender") toDF() defines column names
- 33. IBM | spark.tc AvroData Source (Databricks) Github https://github.com/databricks/spark-avro Maven com.databricks:spark-avro_2.10:2.0.1 Code val df = sqlContext.read .format("com.databricks.spark.avro") .load("file:/root/pipeline/datasets/dating/gender.avro")
- 34. IBM | spark.tc RedshiftData Source (Databricks) Github https://github.com/databricks/spark-redshift Maven com.databricks:spark-redshift:0.5.0 Code val df: DataFrame = sqlContext.read .format("com.databricks.spark.redshift") .option("url", "jdbc:redshift://<hostname>:<port>/<database>…") .option("query", "select x, count(*) my_table group by x") .option("tempdir", "s3n://tmpdir") .load() Copies to S3 for fast, parallel reads vs single Redshift Master bottleneck
- 35. IBM | spark.tc ElasticSearchData Source (Elastic.co) Github https://github.com/elastic/elasticsearch-hadoop Maven org.elasticsearch:elasticsearch-spark_2.10:2.1.0 Code val esConfig = Map("pushdown" -> "true", "es.nodes" -> "<hostname>", "es.port" -> "<port>") df.write.format("org.elasticsearch.spark.sql”).mode(SaveMode.Overwrite) .options(esConfig).save("<index>/<document>")
- 36. IBM | spark.tc CassandraData Source (DataStax) Github https://github.com/datastax/spark-cassandra-connector Maven com.datastax.spark:spark-cassandra-connector_2.10:1.5.0-M1 Code ratingsDF.write.format("org.apache.spark.sql.cassandra") .mode(SaveMode.Append) .options(Map("keyspace"->"dating","table"->"ratings")) .save()
- 37. IBM | spark.tc RESTData Source (Databricks) Coming Soon! https://github.com/databricks/spark-rest? Michael Armbrust Spark SQL Lead @ Databricks
- 38. IBM | spark.tc DynamoDBData Source (IBM Spark Tech Center) Coming Soon! https://github.com/cfregly/spark-dynamodb Me Erlich
- 39. IBM | spark.tc SparkSQLPerformance Tuning (oas.sql.SQLConf) spark.sql.inMemoryColumnarStorage.compressed=true Automatically selects column codec based on data spark.sql.inMemoryColumnarStorage.batchSize Increase as much as possible without OOM – improves compression and GC spark.sql.inMemoryPartitionPruning=true Enable partition pruning for in-memory partitions spark.sql.tungsten.enabled=true Code Gen for CPU and Memory Optimizations (Tungsten aka Unsafe Mode) spark.sql.shuffle.partitions Increase from default 200 for large joins and aggregations spark.sql.autoBroadcastJoinThreshold Increase to tune this cost-based, physical plan optimization spark.sql.hive.metastorePartitionPruning Predicate pushdown into the metastore to prune partitions early spark.sql.planner.sortMergeJoin Prefer sort-merge (vs. hash join) for large joins spark.sql.sources.partitionDiscovery.enabled & spark.sql.sources.parallelPartitionDiscovery.threshold
- 40. IBM | spark.tc Freg-a-paloozaUpcoming World Tour ① New York Strata (Sept 29th – Oct 1st) ② London Spark Meetup (Oct 12th) ③ Scotland Data Science Meetup (Oct 13th) ④ Dublin Spark Meetup (Oct 15th) ⑤ Barcelona Spark Meetup (Oct 20th) ⑥ Madrid Spark Meetup (Oct 22nd) ⑦ Amsterdam Spark Summit (Oct 27th – Oct 29th) ⑧ Delft Dutch Data Science Meetup (Oct 29th) ⑨ Brussels Spark Meetup (Oct 30th) ⑩ Zurich Big Data Developers Meetup (Nov 2nd) High probability I’ll end up in jail
- 41. IBM Spark TechCenter is Hiring! Only Fun, Collaborative People - No Erlichs! IBM | spark.tc Sign up for our newsletter at Thank You! Power of data. Simplicity of design. Speed of innovation. Chris Fregly @cfregly
- 42. Power of data.Simplicity of design. Speed of innovation. IBM Spark