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Aspergillosis
Zygomycosis
Hyalohyphomycosis
Endemic mycoses
R Lin
Good internet resource
www.drfungus.org
Fungal infections
• Most fungal infections are opportunistic –
candida is the most common, causing skin
and soft tissue infection
– Severe infection (mucous membrane,
oesophagus) in AIDS
– Systemic infection in neutropenic
• Aspergillus
– Opportunistic, and affects the most severely
neutropenic
Aspergillosis
• Found in the air all around us
• Harmless to normal people – we inhale
hundreds of condidia every day
• Opportunistic disease in the
immunocompromised patient
– Severe neutropenia
– Debilitating disease
– Disruption of normal flora
– Antibiotics, steroids
– Abnormal lung e.g. bronchiectasis, cancer
Aspergillus
• >200 species
• Associated with disease: *A. fumigatus,
A. flavus, A. niger
• Less common: A. nidulans, A. terreus,
A. oryzae, A. ustus, A. versicolor
Laboratory identification
• Grows on Sabouraud agar
• Colony – colour: black, yellow, green,
white, red, brown
• 3 structures to recognize
– Mycelium - branching, hyaline, septate
– Condial head
– Condidia : shape and arrange help identify
species
A. fumigatus
A. flavus
A. niger
Spectrum of disease
• Colonization: sinuses, lungs
• Toxicosis: aflatoxin (A. flavus)
• Allergic bronchopulmonary aspergillosis:
sinuses, lungs
• Pulmonary aspergilloma: pre-existing lung
cavity
• Invasive aspergillosis: pulmonary, sinonasal,
central nervous system, endocarditis, renal
• Others e.g. otomycosis (A. niger)
Invasive aspergillosis
• Most commonly in severely neutropenic e.g.
after bone marrow transplant
• Portal of entry: sinuses, lungs
• Difficult to diagnose
– Clinical suspicion, radiology, laboratory tests
• Difficult to treat
– Amphotericin B, voriconazole, itraconazole
– Surgical resection
• Poor outcome
Laboratory investigation
• Microscopy: KOH prep, sputum,
bronchoalveolar lavage
• Histology: lung
• Culture: sputum (contaminant?), BAL,
tissue
• Galactomannan EIA
• PCR: 18sRNA gene, not always useful
Galactomannan EIA
• Monitor post-transplant
• patient 2x / week
• Rising value or high value + symptoms
• False-positives
– Penicillin-containing antibiotic
– Milk, cereals
Zygomycosis
Rhizopus arrhizus (oryzae)
• Title: Characteristic sporangial production
• Disease(s): Zygomycosis
• Legend: Nodal rhizoids, sporangiophore, “umbrella-shaped” collapsed columella, and sporangiospores.
Potato flakes agar tease mount. Color enhanced.
• Genus/Species: Rhizopus arrhizus (oryzae)
• Image Type: Microscopic Morphology
http://www.doctorfungus.org
Mucor species
http://www.doctorfungus.org
• Slide Reference #: GK 593• Genus/Species: Mucor species
• Disease(s): Systemic Zygomycosis
(Mucormycosis)
• Image Type: Microscopic Morphology
Many species
• e.g. Mucor spp., Absidia spp., Rhizopus
spp., Rhizomucor spp., Cunninghamella
spp.
• Widely found in the environment
• Immunocompromised patients at risk
(as for aspergillus), trauma patients
Zygomycosis: disease
• Invade the bloodstream – disseminated
disease
• Local invasion – pulmonary,
rhinocerebral
• Intravenous drug use - cerebral
infection
• Cutaneous – burns, trauma
treatment
• Very high mortality - 96% for
disseminated disease
• Surgery and antifungals
Zygomycosis – laboratory
diagnosis
• Tissue – histology
• Culture from deep sites (beware
contamination!) e.g. rhinocerebral, BSL
• That’s all we have lab tests!
“Hyalohyphomycosis”
• Hyaline septate hyphae
• Non-pigmented
• No differentiating features
• Many species of fungi
• When cultured – some are distinct and
can be identified
e.g. Fusarium sp.
• Common in soil, plant, environment
• Typical macroconidia
• cause
– Keratitis e.g. with contact lens
– Invasive disseminated disease in
neutropenic
– Skin and subcutaneous lesions in
disseminated disease
Fusarium dimerum
• Title: ---
• Disease(s): ---
• Legend: ---
• Genus/Species: Fusarium dimerum
• Image Type: Microscopic Morphology
http://www.doctorfungus.org
e.g. Penicillium marneffei
• Most penicillium harmless
• P. marneffei
– Dimorphic – yeast 37 deg C, mould 25 deg C
– Disseminated to the blood in AIDS patients in
SE Asia
– Fever, skin, liver, spleen, multi-organ
Penicillium marneffei
http://www.doctorfungus.org
• Slide Reference #: GK 488
• Genus/Species: Penicillium marneffei
• Disease(s): Penicilliosis marneffei• Image Type: Macroscopic Morphology
Penicillium marneffei
http://www.doctorfungus.org
• Slide Reference #: GK 489
• Genus/Species: Penicillium marneffei
• Disease(s): Penicilliosis marneffei• Image Type: Microscopic Morphology
Pigmented moulds
• Dihydroxynaphthalene melanin in their
cell walls
• Many many species of fungi
• Many types of infection – skin, brain,
lung etc
• Chronic tissue infections
– chromoblastomycosis
– mycetoma
Curvularia lunata
http://www.doctorfungus.org
• Slide Reference #: GK 472• Genus/Species: Curvularia lunata
• Disease(s): Mycotic keratitis• Image Type: Microscopic Morphology
Madurella grisea
• Title: Mycetoma
• Disease(s): Mycetoma
• Legend: Sclerotium in tissue of the foot, H & E stain.
• Genus/Species: Madurella grisea
• Image Type: Histopathology
http://www.doctorfungus.org
Madurella mycetomatis
• Title: Mycetoma
• Disease(s): Mycetoma
• Legend: Multiple draining sinuses, swollen tissue, and sclerotia are present.
• Genus/Species: Madurella mycetomatis
• Image Type: Clinical Presentation
http://www.doctorfungus.org
ENDEMIC MYCOSES
• Coccidioidomycosis
• Histoplasmosis
• Blastomycosis
• Paracoccidioidomycosis
Endemic mycoses
• thermally dimorphic fungi
– As moulds in the soil
– Yeast forms in the human body (37 deg C)
• Geographic distribution varies
• Inhalation pulmonary INFECTION 
dissemination
• No evidence of transmission among humans
or animals
• Otherwise healthy individuals are infected
Endemic mycoses
• Geographical location is important. Get history
of travel; except histoplasmosis (worldwide)
• Clinical suspicion: liver/spleen/lungs/
mucocutaneous involved
• May have no symptoms
• Route of infection: through lungs or direct
inoculation of skin
• Cause skin lesions, pneumonia, liver/spleen
Tests for systemic mycoses
• Microscopy
• Fungal culture (2 temperatures!)
• Tissue: histopathology
• Serology – often older methods like
immunodiffusion, complement fixation
• Skin test of limited value
• Others: urinary antigen (e.g.
histoplasma)
COCCIDIOIDOMYCOSIS
Aetiology: Coccidioides immitis
Location: Confined to southwestern US,
northern Mexico, Central and South
America
Microscopy
-Tissue 37°C: Spherules filled with
endospores
- 25°C: hyphae, barrel-shaped
arthroconidia
Case history
A 71-year-old male subject regularly spends several winter
months in Arizona to play golf in the sun. Last March he
experienced a gradual onset of fever and a headache,
followed by a non-productive cough, myalgia and profound
fatigue. His local physician diagnosed bronchopneumonia on
chest radiograph, and prescribed azithromycin. The antibiotic
provided no benefit, and ultimately the patient received two
more courses of different empiric antibiotics. He returned
home with continued cough and fatigue, even though the
fever had abated somewhat. Two months following the initial
onset of symptoms, a bronchoscopy was performed, and
cultures grew Coccidioides species.
Other presentations
Months to years following a symptomatic or asymptomatic
infection, the affected lung may show complete resolution or
an area of calcified or uncalcified pulmonary nodule similar
radiographically to cancer. Microscopic examination of
excised tissue identifies the organism. Occasionally the
nodule liquefies to form a thin-walled cavity, which may
close spontaneously or remain and become a nidus for
suprainfection or spontaneous pneumothorax.
Extrapulmonary dissemination can be identified in nearly all
tissues, although skin and soft tissue, bones and meninges
are the most common sites of dissemination. Chronic
fibrocavitary pneumonia is seen infrequently, with chronic
cough and dyspnoea, night sweats and weight loss, and
lung fibrosis with thick-walled cavities.
From BMJ Best Practice
Coccidioides immitis
Coccidioides immitis
Disseminated coccidioidomycosis
Histoplasma capsulatum
HISTOPLASMOSIS
• Aetiology: Histoplasma capsulatum
• Natural reservoir: soil, bat and avian habitats
• Location: May be prevalent all over the world, but
the incidence varies widely
• Microscopy
– Yeast cell in tissue (37°C)
– Hyphae, microconidia and macroconidia
(tuberculate chlamydospore) at 25 °C
Histoplasma capsulatum
Histoplasma
Blastomyces dermatitidis
BLASTOMYCOSIS
• Aetiology: Blastomyces dermatitidis
• Location: America, Africa, Asia
• Microscopy:
– Yeasts at 37°C: bud is attached to the
parent cell by a broad base
– Hyphae and conidia at 25 °C
Blastomycosis
Paracoccidioides brasiliensis
PARACOCCIDIOIDOMYCOSIS
• Aetiology: Paracoccidioides brasiliensis
• Location: Central and South America
• Pathogenesis: Inhalation of conidia
• Microscopy
– At 37°C (in tissue ): multiply budding
yeasts; the buds are attached to the
parent cell by a narrow base
– At 25 °C: hyphae and conidia

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Aspergillus and systemic mycoses

  • 3. Fungal infections • Most fungal infections are opportunistic – candida is the most common, causing skin and soft tissue infection – Severe infection (mucous membrane, oesophagus) in AIDS – Systemic infection in neutropenic • Aspergillus – Opportunistic, and affects the most severely neutropenic
  • 4. Aspergillosis • Found in the air all around us • Harmless to normal people – we inhale hundreds of condidia every day • Opportunistic disease in the immunocompromised patient – Severe neutropenia – Debilitating disease – Disruption of normal flora – Antibiotics, steroids – Abnormal lung e.g. bronchiectasis, cancer
  • 5.
  • 6. Aspergillus • >200 species • Associated with disease: *A. fumigatus, A. flavus, A. niger • Less common: A. nidulans, A. terreus, A. oryzae, A. ustus, A. versicolor
  • 7. Laboratory identification • Grows on Sabouraud agar • Colony – colour: black, yellow, green, white, red, brown • 3 structures to recognize – Mycelium - branching, hyaline, septate – Condial head – Condidia : shape and arrange help identify species
  • 9.
  • 10.
  • 11.
  • 12. Spectrum of disease • Colonization: sinuses, lungs • Toxicosis: aflatoxin (A. flavus) • Allergic bronchopulmonary aspergillosis: sinuses, lungs • Pulmonary aspergilloma: pre-existing lung cavity • Invasive aspergillosis: pulmonary, sinonasal, central nervous system, endocarditis, renal • Others e.g. otomycosis (A. niger)
  • 13.
  • 14. Invasive aspergillosis • Most commonly in severely neutropenic e.g. after bone marrow transplant • Portal of entry: sinuses, lungs • Difficult to diagnose – Clinical suspicion, radiology, laboratory tests • Difficult to treat – Amphotericin B, voriconazole, itraconazole – Surgical resection • Poor outcome
  • 15.
  • 16. Laboratory investigation • Microscopy: KOH prep, sputum, bronchoalveolar lavage • Histology: lung • Culture: sputum (contaminant?), BAL, tissue • Galactomannan EIA • PCR: 18sRNA gene, not always useful
  • 17. Galactomannan EIA • Monitor post-transplant • patient 2x / week • Rising value or high value + symptoms • False-positives – Penicillin-containing antibiotic – Milk, cereals
  • 18.
  • 20. Rhizopus arrhizus (oryzae) • Title: Characteristic sporangial production • Disease(s): Zygomycosis • Legend: Nodal rhizoids, sporangiophore, “umbrella-shaped” collapsed columella, and sporangiospores. Potato flakes agar tease mount. Color enhanced. • Genus/Species: Rhizopus arrhizus (oryzae) • Image Type: Microscopic Morphology http://www.doctorfungus.org
  • 21. Mucor species http://www.doctorfungus.org • Slide Reference #: GK 593• Genus/Species: Mucor species • Disease(s): Systemic Zygomycosis (Mucormycosis) • Image Type: Microscopic Morphology
  • 22. Many species • e.g. Mucor spp., Absidia spp., Rhizopus spp., Rhizomucor spp., Cunninghamella spp. • Widely found in the environment • Immunocompromised patients at risk (as for aspergillus), trauma patients
  • 23. Zygomycosis: disease • Invade the bloodstream – disseminated disease • Local invasion – pulmonary, rhinocerebral • Intravenous drug use - cerebral infection • Cutaneous – burns, trauma
  • 24. treatment • Very high mortality - 96% for disseminated disease • Surgery and antifungals
  • 25. Zygomycosis – laboratory diagnosis • Tissue – histology • Culture from deep sites (beware contamination!) e.g. rhinocerebral, BSL • That’s all we have lab tests!
  • 27. • Hyaline septate hyphae • Non-pigmented • No differentiating features • Many species of fungi • When cultured – some are distinct and can be identified
  • 28. e.g. Fusarium sp. • Common in soil, plant, environment • Typical macroconidia • cause – Keratitis e.g. with contact lens – Invasive disseminated disease in neutropenic – Skin and subcutaneous lesions in disseminated disease
  • 29. Fusarium dimerum • Title: --- • Disease(s): --- • Legend: --- • Genus/Species: Fusarium dimerum • Image Type: Microscopic Morphology http://www.doctorfungus.org
  • 30. e.g. Penicillium marneffei • Most penicillium harmless • P. marneffei – Dimorphic – yeast 37 deg C, mould 25 deg C – Disseminated to the blood in AIDS patients in SE Asia – Fever, skin, liver, spleen, multi-organ
  • 31. Penicillium marneffei http://www.doctorfungus.org • Slide Reference #: GK 488 • Genus/Species: Penicillium marneffei • Disease(s): Penicilliosis marneffei• Image Type: Macroscopic Morphology
  • 32. Penicillium marneffei http://www.doctorfungus.org • Slide Reference #: GK 489 • Genus/Species: Penicillium marneffei • Disease(s): Penicilliosis marneffei• Image Type: Microscopic Morphology
  • 33. Pigmented moulds • Dihydroxynaphthalene melanin in their cell walls • Many many species of fungi • Many types of infection – skin, brain, lung etc • Chronic tissue infections – chromoblastomycosis – mycetoma
  • 34. Curvularia lunata http://www.doctorfungus.org • Slide Reference #: GK 472• Genus/Species: Curvularia lunata • Disease(s): Mycotic keratitis• Image Type: Microscopic Morphology
  • 35. Madurella grisea • Title: Mycetoma • Disease(s): Mycetoma • Legend: Sclerotium in tissue of the foot, H & E stain. • Genus/Species: Madurella grisea • Image Type: Histopathology http://www.doctorfungus.org
  • 36. Madurella mycetomatis • Title: Mycetoma • Disease(s): Mycetoma • Legend: Multiple draining sinuses, swollen tissue, and sclerotia are present. • Genus/Species: Madurella mycetomatis • Image Type: Clinical Presentation http://www.doctorfungus.org
  • 37. ENDEMIC MYCOSES • Coccidioidomycosis • Histoplasmosis • Blastomycosis • Paracoccidioidomycosis
  • 38. Endemic mycoses • thermally dimorphic fungi – As moulds in the soil – Yeast forms in the human body (37 deg C) • Geographic distribution varies • Inhalation pulmonary INFECTION  dissemination • No evidence of transmission among humans or animals • Otherwise healthy individuals are infected
  • 39. Endemic mycoses • Geographical location is important. Get history of travel; except histoplasmosis (worldwide) • Clinical suspicion: liver/spleen/lungs/ mucocutaneous involved • May have no symptoms • Route of infection: through lungs or direct inoculation of skin • Cause skin lesions, pneumonia, liver/spleen
  • 40. Tests for systemic mycoses • Microscopy • Fungal culture (2 temperatures!) • Tissue: histopathology • Serology – often older methods like immunodiffusion, complement fixation • Skin test of limited value • Others: urinary antigen (e.g. histoplasma)
  • 41. COCCIDIOIDOMYCOSIS Aetiology: Coccidioides immitis Location: Confined to southwestern US, northern Mexico, Central and South America Microscopy -Tissue 37°C: Spherules filled with endospores - 25°C: hyphae, barrel-shaped arthroconidia
  • 42. Case history A 71-year-old male subject regularly spends several winter months in Arizona to play golf in the sun. Last March he experienced a gradual onset of fever and a headache, followed by a non-productive cough, myalgia and profound fatigue. His local physician diagnosed bronchopneumonia on chest radiograph, and prescribed azithromycin. The antibiotic provided no benefit, and ultimately the patient received two more courses of different empiric antibiotics. He returned home with continued cough and fatigue, even though the fever had abated somewhat. Two months following the initial onset of symptoms, a bronchoscopy was performed, and cultures grew Coccidioides species.
  • 43. Other presentations Months to years following a symptomatic or asymptomatic infection, the affected lung may show complete resolution or an area of calcified or uncalcified pulmonary nodule similar radiographically to cancer. Microscopic examination of excised tissue identifies the organism. Occasionally the nodule liquefies to form a thin-walled cavity, which may close spontaneously or remain and become a nidus for suprainfection or spontaneous pneumothorax. Extrapulmonary dissemination can be identified in nearly all tissues, although skin and soft tissue, bones and meninges are the most common sites of dissemination. Chronic fibrocavitary pneumonia is seen infrequently, with chronic cough and dyspnoea, night sweats and weight loss, and lung fibrosis with thick-walled cavities. From BMJ Best Practice
  • 48. HISTOPLASMOSIS • Aetiology: Histoplasma capsulatum • Natural reservoir: soil, bat and avian habitats • Location: May be prevalent all over the world, but the incidence varies widely • Microscopy – Yeast cell in tissue (37°C) – Hyphae, microconidia and macroconidia (tuberculate chlamydospore) at 25 °C
  • 51.
  • 52.
  • 53.
  • 55. BLASTOMYCOSIS • Aetiology: Blastomyces dermatitidis • Location: America, Africa, Asia • Microscopy: – Yeasts at 37°C: bud is attached to the parent cell by a broad base – Hyphae and conidia at 25 °C
  • 58. PARACOCCIDIOIDOMYCOSIS • Aetiology: Paracoccidioides brasiliensis • Location: Central and South America • Pathogenesis: Inhalation of conidia • Microscopy – At 37°C (in tissue ): multiply budding yeasts; the buds are attached to the parent cell by a narrow base – At 25 °C: hyphae and conidia

Editor's Notes

  1. Legend: Microscopic morphology of a Mucor sp. showing erect, simple sporangiophores forming a terminal, globose sporangium, packed with sporangiospores and with a well developed subtending columella visible (Slide reference #: GK 591). The sporangial wall then dissolves allowing the release of the sporangiospores which exposes the columella (Slide reference #: GK 592). A collarette (remnants of the sporangial wall) is usually visible at the base of the columella following spore dispersal (Slide reference #: GK 593). Stolons and rhizoids are not produced by species of Mucor .
  2. Legend: Culture of P. marneffei showing distinctive red diffusible pigment. On Sabouraud's dextrose agar at 25°C, colonies are fast growing, suede-like to downy, white with yellowish-green conidial heads. Colonies become greyish-pink to brown with age and produce a diffusible brownish-red to wine red-pigment.
  3. Legend: Microscopic morphology of P. marneffei showing hyaline, smooth-walled conidiophores bearing terminal verticils of 3 to 5 metulae, each bearing 3 to 7 phialides. Conidia are globose to subglobose, 2 to 3µm in diameter, smooth-walled and are produced in basipetal succession from the phialides.
  4. Legend: Microscopic morphology of Curvularia lunata showing pale brown multicelled conidia (phragmoconidia) formed apically through a pore (poroconidia) in a sympodially elongating geniculate conidiophore similar to Drechslera . Conidia are cylindrical or slightly curved, with one of the central cells being larger and darker.