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STRUCTRAL ELUCIDATION BY
NMR(Proton)
1
By: Nilam Ghadagepatil.
M. Pharm 1st sem.
(PHARM. QUALITY
ASSURANCE)
Guided by: Prof. Amol Bansode.
Date:21-feb-2022
INDEX
1.Intoduction
2.NMR spectroscopy types.
3.Priniciple.
4.1 H NMR.
5. Structural Elucidation.
Application.
2
3
 Introduction :
NMR : Nuclear Magnetic Resonance(NMR) is spectroscopy
technique which is based on the absorption of electromagnetic
radiation in the radio frequency region 4 to 900 Mhz by nuclei of
the atoms.
P NMR : Proton Nuclear Magnetic Resonance spectroscopy is
one of the most powerful tools for elucidating the number of
hydrogen or proton in the compound.
 NMR Spectroscopy
1.Proton(1H) nuclear magnetic resonance (PMR or 1H-
NMR) .
2.Carbon (13C)nuclear magnetic resonance(13C-NMR).
3.Two Dimensional NMR (2D-NMR).
4
Principle of 1H NMR :
The principle behind NMR is that many
nuclei have spin and all nuclei are
electrically charged. If an external
magnetic field is applied ,an energy
transfer is possible between the base
energy to higher energy level.
5
• When proton is not in electric field proton are arranged in randomly.
• When electric field is applied proton arrange in antiparallel or parallel.
• Parallel =+1/2
Antiparallel=-1/2
6
7
 Chemical shift
The position on the plot at which the nuclei absorbs is
called the chemical shift .
or
A Chemical Shift is defined as difference in parts per
million(ppm) between the resonance frequency of the
observed proton and tetramethylsilane (TMS) hydrogens.
The NMR spectrum is plot of intensity of NMR signals VS
magnetic field in reference to TMS. 8
 Shielding of proton: High electron density around a nucleus
shields the nucleus from the external magnetic field and signal
are up field in the NMR spectrum.
 Deshielding of proton: Lower electron density around a nucleus
Deshields the nucleus from the external magnetic field and the
signals are downfield in the NMR spectrum.
9
Example:
A.R-CH2-R (alkyl) electron donating-up
field
A B
B.R-CH2-Cl(Halogen)
electron withdrawing-downfield
10
 1 H -NMR
•Nuclear Magnetic resonance spectroscopy
•Study of nucleus
11
O
OH
CH3
CH3
H3C
WHAT IS INSIDE THE NUCLEUS
12
1 Nucleus=Protons + Neutrons
2 These protons and neutrons spin around their own axis.
3. Each spin has magnitude of ½.
4. Magnitude of the spin of nucleus is because of Protons and
Neutrons(overall spin of the nucleus depend on spin of P and N)
5. If these spins are paired against each other , the nucleus of that atom
posses NO overall spin.
• If the number of neutrons and the number of protons
are both even , then the nucleus has No spin
• If the number of neutrons and the number of protons are
both odd then the nucleus has an integer spin (i.e.1,2,3)
• If the number of neutrons plus the number of protons is
odd ,then the nucleus has a half-integer
spin(1/2,3/2,5/2).so,1
1H and 6
13C can be studied
13
Nucleus of 12C=6P+6 N
Nucleus of 13 C=6P+7N
14
P+N
1H-NMR=PROTON NMR=PMR
In the nucleus of hydrogen there is only one proton ,which is
responsible for the overall spin of hydrogen nucleus. So when
we study hydrogen nucleus means we are studying the spinning
proton hence we call it as proton NMR or PMR .
Spin Quantum Number: Spin quantum number describes the
angular momentum of an electron.
15
1H-NMR spectrum :
16
4.Peak Multiplicity/Peak splitting : Due to spin –spin coupling . Based on N+1 rule .
Intensity of the peaks in multiplets is calculated using pascal triangle
3.Position of signal : Range of chemical shift value at which the peak will appear in
NMR spectrum
2.Intensity of signals: Height of the peak due to number of protons
(hydrogen ) represented by each peak.
1.Number of peak in 1H-NMR: Number of sets of equivalent protons
1.Number of peak in 1H-NMR spectrum : Number of sets of
chemically equivalent protons
• Protons in different environments give different NMR signals.
• Protons in same chemical environment are called as equivalent
protons and such equivalent protons give the same NMR signal
17
H3C
O
CH3
H3C Cl
O
H3C
CH3
6 H Ha Hb Ha Hb Hc
1 peak 2 peak 3 peaks
Intensity of peak : Peak height
1.Number of signals=5
2.Peak intensity= Hc >Ha>Hb/Hd >He
o
OH
CH3
CH3
H3C
3.Position of signals:
• Chemical shift:
He-Electronegative so it is in downfield region
19
O
OH
CH3
CH3
H3C
TMS
20
12 11 10 9 8 7 6 5 4 3 2 1 0
Chemical shift(ppm)
I
n
t
e
n
s
I
t
y
21
4.Peak multiplicity/Peak splitting due to spin spin
coupling:N+1 rule
23
Multiplicity – The Spin-Spin Splitting
• Depending on how many neighbors it has, the signal of a given proton can
be split into lines. The simplest signal consists of one line and is called
a singlet, followed by the doublet, triplet, etc. A signal with more than seven
lines is referred to as a multiplet.
• The number of peaks is obtained by the N+1 rule, where N is the number of
neighboring protons.
• For example, if the proton has one neighbor, it gives a doublet (1+1), if there
are two adjacent protons, we get a triplet (2+1).
24
(1,1,2-trichloroethane)
n+ 1=2+1=3=triplet
n+1=1+1=2=doublet
2. Ethyliodide
n+1=3+1=4=quartet
n+1=2+1=triplet
25
• He=singlet n+1=0+1=1
• Hd=singlet n+1=0+1=1
• Hc =singlet n+1=0+1=1
• Hb=quartet n+1=3+1=4
• Ha=triplet n+1=2+1=3
26
O
OH
CH3
CH3
H3C
27
1H NMR Absorption by type of compound
• A.Alkanes M.Carboxylic Acid
• B.Alkenes N. Amides
• C.Aromatic compounds O. Nitroalkanes
• D.Alkynes
• E.Alkyl Halides
• F.Alcohols
• G.Ethers
• H.Amines
• I.Nitriles
• J.Aldehydes
• K.ketones
• L.Esters
28
Octane
a.1.26
b. 0.88
29
A.ALKANES
B. Alkenes
2-methyl-1-pentene
a.4.68
b.1.980
c.1.703
d.1.47
e.0.90
30
a b c d e
C. Aromatic Compound
alpha- chloro -p-xylene
a.7.363
b.4.558
31
D.Alkynes
1pentyne
a.2.15
b.1.936
c.1.55
d.1.00
32
A B D C
E.Alkyl Halides
1-chlorobutane
a.0.916
b.1.413
c.1.683
c.3.42
33
F.Alcohols
2-methyl-1-propanol
a.3.391
b.2.07
c.1.75
d.0.920
34
G.Ethers
Butyl methyl ether
a .0.9 e.3.4
b.1.5 d.3.5
c.1.7
35
H.Amines:
Propylamine
a.2.653
b.1.45
c.1.24
d.0.92
36
I.Nitriles
Valeronitrile
a.2.342
b.1.63
c.1.50
d.0.959
37
J.Aldehydes:
2methyl-1propanal
a.3.391
b.2.07
c.1.75
d.0920
38
K.Ketones
5-methyl-2-hexanone
a.2.418
b.2.137
c.1.64-1.35
d.0.89
39
40
L.Esters
Isobutyl acetate
a.0.94
b.1.93
c.2.054
d.3.849
41
M. Carboxylic acid
Dimethylmalonic acid
a.1.285
42
Toluene
43
1H-NMR spectrum of primary amine functional
phenol/aniline benzoxazine monomer.
44
COCAINE
Purity measurement of a caffeine sample with TCNB as internal reference. From the peak integrals, the
purity is calculated to be 97.8%.
45
46
APPLICATION
47
• Bacterial identification and metabolic studies
1H NMR spectroscopy has been used for bacterial identification and quantification and for metabolic
pathways studies. Several studies have been conducted for the diagnosis of the bacteria that cause urinary
tract infections (UTI).
• Antimicrobial susceptibility assays
The use of 1H NMR spectroscopy for antimicrobial susceptibly tests has been not highly studied despite its
powerful utility in this area of study [5]. Application of 1H NMR spectroscopy to antimicrobial
susceptibility studies was first carried out on
• Applications in bio fluids
In the last few years, 1H NMR has been used to directly analyse biofluids and to diagnose different
diseases directly from body fluids. In this sense, it has been applied to analyse human microbiota from
faeces and urine samples
• Other types of analyses
The combination of NMR spectroscopy, with the use of isotopically substituted molecules as tracers is a
well‐established protocol in microbiology.
REFEENCE
1. Pavia DL, Lampman GM, Kriz GS. Introduction to Spectroscopy third
edition. Thomson Learning, Inc. 2001. p. 579.
2. Webb GA. NMR Spectroscopy. Annu Reports Prog Chem - Sect C.
1992;89(December):3–36.
3. https://m.chemicalbook.com/SpectrumEN_627-05-4_MS.htm
4. https://www.sciencedirect.com/topics/chemistry/1h-nmr-spectrum
48
49

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Structural Elucidation by 1H NMR

  • 1. STRUCTRAL ELUCIDATION BY NMR(Proton) 1 By: Nilam Ghadagepatil. M. Pharm 1st sem. (PHARM. QUALITY ASSURANCE) Guided by: Prof. Amol Bansode. Date:21-feb-2022
  • 2. INDEX 1.Intoduction 2.NMR spectroscopy types. 3.Priniciple. 4.1 H NMR. 5. Structural Elucidation. Application. 2
  • 3. 3  Introduction : NMR : Nuclear Magnetic Resonance(NMR) is spectroscopy technique which is based on the absorption of electromagnetic radiation in the radio frequency region 4 to 900 Mhz by nuclei of the atoms. P NMR : Proton Nuclear Magnetic Resonance spectroscopy is one of the most powerful tools for elucidating the number of hydrogen or proton in the compound.
  • 4.  NMR Spectroscopy 1.Proton(1H) nuclear magnetic resonance (PMR or 1H- NMR) . 2.Carbon (13C)nuclear magnetic resonance(13C-NMR). 3.Two Dimensional NMR (2D-NMR). 4
  • 5. Principle of 1H NMR : The principle behind NMR is that many nuclei have spin and all nuclei are electrically charged. If an external magnetic field is applied ,an energy transfer is possible between the base energy to higher energy level. 5
  • 6. • When proton is not in electric field proton are arranged in randomly. • When electric field is applied proton arrange in antiparallel or parallel. • Parallel =+1/2 Antiparallel=-1/2 6
  • 7. 7
  • 8.  Chemical shift The position on the plot at which the nuclei absorbs is called the chemical shift . or A Chemical Shift is defined as difference in parts per million(ppm) between the resonance frequency of the observed proton and tetramethylsilane (TMS) hydrogens. The NMR spectrum is plot of intensity of NMR signals VS magnetic field in reference to TMS. 8
  • 9.  Shielding of proton: High electron density around a nucleus shields the nucleus from the external magnetic field and signal are up field in the NMR spectrum.  Deshielding of proton: Lower electron density around a nucleus Deshields the nucleus from the external magnetic field and the signals are downfield in the NMR spectrum. 9
  • 10. Example: A.R-CH2-R (alkyl) electron donating-up field A B B.R-CH2-Cl(Halogen) electron withdrawing-downfield 10
  • 11.  1 H -NMR •Nuclear Magnetic resonance spectroscopy •Study of nucleus 11 O OH CH3 CH3 H3C
  • 12. WHAT IS INSIDE THE NUCLEUS 12 1 Nucleus=Protons + Neutrons 2 These protons and neutrons spin around their own axis. 3. Each spin has magnitude of ½. 4. Magnitude of the spin of nucleus is because of Protons and Neutrons(overall spin of the nucleus depend on spin of P and N) 5. If these spins are paired against each other , the nucleus of that atom posses NO overall spin.
  • 13. • If the number of neutrons and the number of protons are both even , then the nucleus has No spin • If the number of neutrons and the number of protons are both odd then the nucleus has an integer spin (i.e.1,2,3) • If the number of neutrons plus the number of protons is odd ,then the nucleus has a half-integer spin(1/2,3/2,5/2).so,1 1H and 6 13C can be studied 13
  • 14. Nucleus of 12C=6P+6 N Nucleus of 13 C=6P+7N 14 P+N
  • 15. 1H-NMR=PROTON NMR=PMR In the nucleus of hydrogen there is only one proton ,which is responsible for the overall spin of hydrogen nucleus. So when we study hydrogen nucleus means we are studying the spinning proton hence we call it as proton NMR or PMR . Spin Quantum Number: Spin quantum number describes the angular momentum of an electron. 15
  • 16. 1H-NMR spectrum : 16 4.Peak Multiplicity/Peak splitting : Due to spin –spin coupling . Based on N+1 rule . Intensity of the peaks in multiplets is calculated using pascal triangle 3.Position of signal : Range of chemical shift value at which the peak will appear in NMR spectrum 2.Intensity of signals: Height of the peak due to number of protons (hydrogen ) represented by each peak. 1.Number of peak in 1H-NMR: Number of sets of equivalent protons
  • 17. 1.Number of peak in 1H-NMR spectrum : Number of sets of chemically equivalent protons • Protons in different environments give different NMR signals. • Protons in same chemical environment are called as equivalent protons and such equivalent protons give the same NMR signal 17 H3C O CH3 H3C Cl O H3C CH3 6 H Ha Hb Ha Hb Hc 1 peak 2 peak 3 peaks
  • 18. Intensity of peak : Peak height 1.Number of signals=5 2.Peak intensity= Hc >Ha>Hb/Hd >He o OH CH3 CH3 H3C
  • 19. 3.Position of signals: • Chemical shift: He-Electronegative so it is in downfield region 19 O OH CH3 CH3 H3C
  • 20. TMS 20 12 11 10 9 8 7 6 5 4 3 2 1 0 Chemical shift(ppm) I n t e n s I t y
  • 21. 21
  • 22. 4.Peak multiplicity/Peak splitting due to spin spin coupling:N+1 rule 23
  • 23. Multiplicity – The Spin-Spin Splitting • Depending on how many neighbors it has, the signal of a given proton can be split into lines. The simplest signal consists of one line and is called a singlet, followed by the doublet, triplet, etc. A signal with more than seven lines is referred to as a multiplet. • The number of peaks is obtained by the N+1 rule, where N is the number of neighboring protons. • For example, if the proton has one neighbor, it gives a doublet (1+1), if there are two adjacent protons, we get a triplet (2+1). 24
  • 25. • He=singlet n+1=0+1=1 • Hd=singlet n+1=0+1=1 • Hc =singlet n+1=0+1=1 • Hb=quartet n+1=3+1=4 • Ha=triplet n+1=2+1=3 26 O OH CH3 CH3 H3C
  • 26. 27
  • 27. 1H NMR Absorption by type of compound • A.Alkanes M.Carboxylic Acid • B.Alkenes N. Amides • C.Aromatic compounds O. Nitroalkanes • D.Alkynes • E.Alkyl Halides • F.Alcohols • G.Ethers • H.Amines • I.Nitriles • J.Aldehydes • K.ketones • L.Esters 28
  • 30. C. Aromatic Compound alpha- chloro -p-xylene a.7.363 b.4.558 31
  • 34. G.Ethers Butyl methyl ether a .0.9 e.3.4 b.1.5 d.3.5 c.1.7 35
  • 39. 40
  • 43. 1H-NMR spectrum of primary amine functional phenol/aniline benzoxazine monomer. 44
  • 44. COCAINE Purity measurement of a caffeine sample with TCNB as internal reference. From the peak integrals, the purity is calculated to be 97.8%. 45
  • 45. 46
  • 46. APPLICATION 47 • Bacterial identification and metabolic studies 1H NMR spectroscopy has been used for bacterial identification and quantification and for metabolic pathways studies. Several studies have been conducted for the diagnosis of the bacteria that cause urinary tract infections (UTI). • Antimicrobial susceptibility assays The use of 1H NMR spectroscopy for antimicrobial susceptibly tests has been not highly studied despite its powerful utility in this area of study [5]. Application of 1H NMR spectroscopy to antimicrobial susceptibility studies was first carried out on • Applications in bio fluids In the last few years, 1H NMR has been used to directly analyse biofluids and to diagnose different diseases directly from body fluids. In this sense, it has been applied to analyse human microbiota from faeces and urine samples • Other types of analyses The combination of NMR spectroscopy, with the use of isotopically substituted molecules as tracers is a well‐established protocol in microbiology.
  • 47. REFEENCE 1. Pavia DL, Lampman GM, Kriz GS. Introduction to Spectroscopy third edition. Thomson Learning, Inc. 2001. p. 579. 2. Webb GA. NMR Spectroscopy. Annu Reports Prog Chem - Sect C. 1992;89(December):3–36. 3. https://m.chemicalbook.com/SpectrumEN_627-05-4_MS.htm 4. https://www.sciencedirect.com/topics/chemistry/1h-nmr-spectrum 48
  • 48. 49