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Monitoring and Biodiversity 
Indices 
„Monitoring is commonly defined as the process of gathering 
information about state variables at different points in 
time for the purpose of drawing inferences about changes 
in state (Yoccoz et al. 2001), whereas an indicator is defined 
as a metric that represents that state. Biodiversity 
indicators can be straightforwardmetrics, such as relative 
abundance of species, or they can be composite metrics 
that combine data from a number of different monitoring 
programs (Collen et al. 2009).“ 
Jones et al. 2011: Conservation Biology 25, pp. 450-457
CBD Article 7: I & M
CBD Article 7: I & M
CBD Article 7: I & M 
Each Contracting Party shall, as far as possible and as appropriate, in particular for the 
purposes of Articles 8 to 10: 
(a) Identify components of biological diversity important for its conservation and 
sustainable use having regard to the indicative list of categories set down in Annex I; 
(b) Monitor, through sampling and other techniques, the components of biological 
diversity identified pursuant to subparagraph (a) above, paying particular attention to 
those requiring urgent conservation measures and those which offer the greatest 
potential for sustainable use; 
(c) Identify processes and categories of activities which have or are likely to have 
significant adverse impacts on the conservation and sustainable use of biological 
diversity, and monitor their effects through sampling and other techniques; and 
(d) Maintain and organize, by any mechanism data, derived from identification and 
monitoring activities pursuant to subparagraphs (a), (b) and (c) above
CBD Article 7: I & M 
Annex I. Identification and Monitoring 
1. Ecosystems and habitats: containing high diversity, large numbers of endemic or 
threatened species, or wilderness; required by migratory species; of social, economic, 
cultural or scientific importance; or, which are representative, unique or associated with 
key evolutionary or other biological processes; 
2. Species and communities which are: threatened; wild relatives of domesticated or 
cultivated species; of medicinal, agricultural or other economic value; or social, scientific 
or cultural importance; or importance for research into the conservation and sustainable 
use of biological diversity, such as indicator species; and 
3. Described genomes and genes of social, scientific or economic importance.
CBD Programmes
CBD COP decisions[1 identify 
research needs 
· improvement of basic knowledge and understanding of biodiversity and 
its components; 
· improvement of monitoring systems; 
· improvement of measures of biodiversity 
· improvement of biodiversity valuation 
· improvement of models of change in biodiversity, ecosystem 
functioning and ecosystem services 
· improvement of understanding of thresholds 
· development and refinement of indicators suitable for monitoring 
biodiversity at the global, regional, national and local levels 
· improvement of taxonomic knowledge 
· understanding of ecosystem function and services and their relation to 
human well-being 
[1] Research needs expressed in the COP decisions have been summarized by the Institute for Biodiversity (ibn, www.biodiv.de). This 
information is available from the German Clearing-House Mechanism (CHM), see: http://www.biodiv-chm.de/konvention/fol412327
Indicators according to CBD 
Decision VIII/15
Indicators according to CBD 
Decision VIII/15
Indicators according to CBD 
Decision VIII/15
Sustainable Tropical Forest Management
Sustainable Tropical Forest Management
Early representations of 
wildlife
Basic monitoring schemes: 
collection of specimens 
... or observation: 
• scientific name 
• locality (+ lat/lon) 
• date 
Presence data !
Species concepts 
We intuitively recognize a species as a group of closely similar organisms, such as humans, 
horses or carrots. The scientific definition has varied historically, but one that is often cited today 
is 'a group of morphologically similar organisms of common ancestry that under natural 
conditions are potentially capable of interbreeding.' 
morphological species concept: 
A species is a community, or a number of related communities, whose distinctive morphological 
characters are ... sufficiently definite to entitle it, or them, to a specific name.” 
biological species concept 
AA species is a group of interbreeding natural populations unable to successfully mate or 
reproduce with other such groups, and which occupies a specific niche in nature.” 
phylogenetic species concept 
“A species is the smallest aggregation of populations (sexual) or lineages (asexual) diagnosable 
by a unique combination of character states in comparable individuals”
Development of species descriptions
New Species Descriptions 
Etmopterus viator Straube et al. 2011 
Spektakulärer Fund aus der Tiefsee: Neue Haiart entdeckt 
und wissenschaftlich beschrieben von Dr. Nicolas Straube, Zoologische Staatssammlung 
München (ZSM): 
Straube N., Duhamel, G., Gasco N, Kriwet J & Schliewen UK 
(2011) Description of a new deep-sea Lantern Shark Etmopterus 
viator sp. nov. (Squaliformes: Etmopteridae) from the Southern 
Hemisphere. In: The Kerguelen Plateau: marine ecosystems and 
fisheries G Duhamel & D Welsford D eds.), Société Francaise 
d`Ichthyologie, pp 137-150
How many Species on Earth? 
Erwin´s Estimate 
based on fogging data 
Fogging at the Hainich Forest, Germany. Courtesy: Andreas Floren, University of Würzburg
How many Species on Earth? 
5 – 30 million species? 
Only 1.7 million described...
How many Species on Earth? 
Erwin´s Estimate 
based on fogging data from 19 Luehea seemannii trees 
(Panama), yielding 1,100 beetles 
Est. Number of 
host-specific 
species 
Estimated fraction 
host-specific (%) 
Trophic group Number species 
Herbivores 682 20 140 
Predators 296 5 15 
Fungivores 69 10 7 
Scavengers 96 5 5 
TOTAL 1,100+ 160 
Based on Erwin, T & Scott, JC (1982): Coleopterist´s Bulletin 34, 305and data from May, RM (1986): Nature 324, p. 514
How many Species on Earth? 
Erwin´s Estimate cont´d: 
from 160 host-specific species of canopy beetles 
to 30 million arthropod species in total 
1. Beetles represent 40% of known arthropods: 400 
2. Canopy 2xrich as forest floor 600 
3. 50,000 tropical tree species 
(600x50,000): 30 million
Insect diversity in tropical forests 
www.dorsa.de 
Guess-timates from fogging the canopy: 
30 million (Erwin 1982) - 80 million (Stork 1988) 
Consensus: 5 million - Ratio described/undescribed: 1:3 
.... but how can insect diversity be 
mapped or monitored, if most species 
don´t even have a name?
Undescribed/described species
Present Extinction Rates: 
Current Estimates 
(E.O. Wilson 1990s) 
Suppositions: 
•50 % species localised (endemics) 
•Extinction rate co-varies with forest destruction 
(habitat specialists, destruction massive) 
• 5 million species on Earth (conservative!) 
0.5 x 5,000 000 x 0.007 = 17,500 species per year 
(0.007: forest destruction rate per yr)
Keine Klimafolge: Neuartiges Artensterben 
im 50-Jahre Takt ab 1850, Waldwiese in Thüringen: 
oligotrophente Futterpflanzen erloschen. 
Ausstellung Berliner Sammlungen nach E. Mey
Pursuit of the smallest game...
TYPES OF TOMORROW 
Cerace diehlii 
Heteroc. Sumatr. 12(3): 155-161 
Chironomus sp. WOC 
Eneoptera sp.
Countries of origin of Orthoptera type material deposited in 
German museums 
Deutsche Orthopteren Sammlungen - www.dorsa.de
GBIF –the Global Biodiversity Information 
Facility- was established to redress the 
inequality of data distribution 
Developing World 
Biodiversity 
Developed World 
Biodiversity 
Data
Global Biodiversity Information Facility (GBIF)
GBIF facilitates „Data Papers“
but: GBIF coverage still insufficient: see 
groms.gbif.org
Distribution: 
Expected area 
Outline 
polygon 
distributon 
(cheetah) 
Point distribution 
(Eurasian lynx) 
 Chance observation 
Kills 
Raster cell distributon 
(Iberian lynx) 
 Occupied 
 Not occupied 
Area of occupancy 
Presence/absence data
Advanced monitoring schemes: 
Databases for single individuals: 
otters, gorillas, whales.... 
Humpback fluke identification photos can be 
catalogued with information about the date 
and time of the sighting, pod composition, 
travel direction, and presence / absence of a 
calf. 
More than two thousand humpback 
whales have been individually identified in 
the North Pacific.
Advanced monitoring schemes: 
Movement tracks 
(satellite telemetry) 
Ciconia ciconia - White stork 
appr. 10,000 data points (1991-2003, MPI Ornithology:Berthold et al.)
New technologies: 
Radar 
Radio/Satellite/GPS telemetry 
Genetic fingerprinting/bar-coding 
Isotope markers 
Phototraps 
Acoustic monitoring
Movebank - 
http://www.movebank.org/
Movebank
Bioacoustic monitoring
WWF Living Planet Index 
The LPI is the average of three 
separate indices measuring 
changes in abundance of 
555 terrestrial species, 
323 freshwater species 
267 marine species 
around the world. 
LIVING PLANET 
REPORT 2004
WWF Living Planet Index 
The LPI is the average of three separate 
indices measuring changes in 
abundance of 
555 terrestrial species, 
323 freshwater species 
267 marine species 
around the world. 
LIVING PLANET REPORT 2004
Calculating the Index 
The Living Planet Database (LPD) holds time-series data for over 10,000 populations 
of more than 2000 vertebrate species from around the world.The global LPI is 
calculated using over 7000 of these population time-series which are gathered from a 
variety of sources such as journals, online databases and government reports. 
http://www.zsl.org/science/research-projects/indicators-assessments/calculating-the-index, 
1227,AR.html
Behind the LPI: the GPDD at NERC (Natural 
Environment Research Centre) 
http://www3.imperial.ac.uk/cpb/research/patternsandprocesses/gpdd
Behind the LPI: the GPDD at NERC (Natural 
Environment Research Centre) 
http://www3.imperial.ac.uk/cpb/research/patternsandprocesses/gpdd
Behind the LPI: the GPDD at NERC (Natural 
Environment Research Centre) 
http://www3.imperial.ac.uk/cpb/research/patternsandprocesses/gpdd
comprises conservation 
assessments for nearly 50,000 
species. Around 60% of these 
are vertebrates.
List Index (RLI), which is based 
on the IUCN Red List of 
Threatened Species and is an 
indicator of the relative rate at 
which the conservation status of 
certain species groups change 
over time. 
How is the SRLI calculated? 
Red List Index scoresIn a nutshell, the SRLI uses weight scores based on the Red List status of 
each of the sample species. 
These scores range from 0 (Least Concern) to Extinct/Extinct in the Wild (5). 
Summing these scores across all species and relating them to the worst-case scenario - where all 
species are extinct - gives us an indication of how biodiversity is doing. 
Repeating the assessments over time will then allow us to see whether the extinction risk of 
biodiversity is overall increasing, decreasing or staying the same. 
Red List Calculation For example, this can be seen in the picture at the top of the page which 
shows the RLI for all birds as calculated by Birdlife Internation in collaboration with the IUCN.
Tipping points – H. Mooney, Diversitas 2009
Stock data are monitored for economically 
important species... 
Catch data: Hunting, Whaling and Fishery 
Canadian Cod (Gadus morhua, North Atlantic pop)s Fishery 
Red List: VU; CMS: NL 
From: 
The Collapse of the Canadian Cod Fishery , WebCT Courses at University of Toronto 
http://www.erin.utoronto.ca/~w3env100y/env/ENV100/hum/cod.htm
WWF Living Planet Index 
The LPI is the average of three 
separate indices measuring changes in 
abundance of 
555 terrestrial species, 
323 freshwater species 
267 marine species 
around the world. 
LIVING PLANET REPORT 2004
Hungarian monitoring scheme
International Red List Criteria 
EX 
EW 
CR 
EN 
VU 
DD 
NE 
EXTINCT 
THREATENED 
...but only mammals and birds were sufficiently evaluated!
Global Amphibian Assessment 
The GAA assessed threat status 
and distribution for each of the 
5,743 amphibian species 
known to science. 
35 EXTINCT/EW 
More than 520 scientists from 
over 60 countries contributed to 
the three-year study. 
Results provide a baseline for 
global amphibian conservation, 
and will be used to design 
strategies to save the world’s 
rapidly declining amphibian 
populations 
427 Critically 
Endangered 
The Panamanian golden frog is one of roughly 
110 species of harlequin frog (Atelopus), many of 
which are dying out. Although this species still 
survives, its numbers have fallen significantly.
EuMon Search for insect 
monitoring schemes

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Monitoring and Biodiversity Indices

  • 1. Monitoring and Biodiversity Indices „Monitoring is commonly defined as the process of gathering information about state variables at different points in time for the purpose of drawing inferences about changes in state (Yoccoz et al. 2001), whereas an indicator is defined as a metric that represents that state. Biodiversity indicators can be straightforwardmetrics, such as relative abundance of species, or they can be composite metrics that combine data from a number of different monitoring programs (Collen et al. 2009).“ Jones et al. 2011: Conservation Biology 25, pp. 450-457
  • 4. CBD Article 7: I & M Each Contracting Party shall, as far as possible and as appropriate, in particular for the purposes of Articles 8 to 10: (a) Identify components of biological diversity important for its conservation and sustainable use having regard to the indicative list of categories set down in Annex I; (b) Monitor, through sampling and other techniques, the components of biological diversity identified pursuant to subparagraph (a) above, paying particular attention to those requiring urgent conservation measures and those which offer the greatest potential for sustainable use; (c) Identify processes and categories of activities which have or are likely to have significant adverse impacts on the conservation and sustainable use of biological diversity, and monitor their effects through sampling and other techniques; and (d) Maintain and organize, by any mechanism data, derived from identification and monitoring activities pursuant to subparagraphs (a), (b) and (c) above
  • 5. CBD Article 7: I & M Annex I. Identification and Monitoring 1. Ecosystems and habitats: containing high diversity, large numbers of endemic or threatened species, or wilderness; required by migratory species; of social, economic, cultural or scientific importance; or, which are representative, unique or associated with key evolutionary or other biological processes; 2. Species and communities which are: threatened; wild relatives of domesticated or cultivated species; of medicinal, agricultural or other economic value; or social, scientific or cultural importance; or importance for research into the conservation and sustainable use of biological diversity, such as indicator species; and 3. Described genomes and genes of social, scientific or economic importance.
  • 7. CBD COP decisions[1 identify research needs · improvement of basic knowledge and understanding of biodiversity and its components; · improvement of monitoring systems; · improvement of measures of biodiversity · improvement of biodiversity valuation · improvement of models of change in biodiversity, ecosystem functioning and ecosystem services · improvement of understanding of thresholds · development and refinement of indicators suitable for monitoring biodiversity at the global, regional, national and local levels · improvement of taxonomic knowledge · understanding of ecosystem function and services and their relation to human well-being [1] Research needs expressed in the COP decisions have been summarized by the Institute for Biodiversity (ibn, www.biodiv.de). This information is available from the German Clearing-House Mechanism (CHM), see: http://www.biodiv-chm.de/konvention/fol412327
  • 8. Indicators according to CBD Decision VIII/15
  • 9. Indicators according to CBD Decision VIII/15
  • 10. Indicators according to CBD Decision VIII/15
  • 14. Basic monitoring schemes: collection of specimens ... or observation: • scientific name • locality (+ lat/lon) • date Presence data !
  • 15. Species concepts We intuitively recognize a species as a group of closely similar organisms, such as humans, horses or carrots. The scientific definition has varied historically, but one that is often cited today is 'a group of morphologically similar organisms of common ancestry that under natural conditions are potentially capable of interbreeding.' morphological species concept: A species is a community, or a number of related communities, whose distinctive morphological characters are ... sufficiently definite to entitle it, or them, to a specific name.” biological species concept AA species is a group of interbreeding natural populations unable to successfully mate or reproduce with other such groups, and which occupies a specific niche in nature.” phylogenetic species concept “A species is the smallest aggregation of populations (sexual) or lineages (asexual) diagnosable by a unique combination of character states in comparable individuals”
  • 16. Development of species descriptions
  • 17. New Species Descriptions Etmopterus viator Straube et al. 2011 Spektakulärer Fund aus der Tiefsee: Neue Haiart entdeckt und wissenschaftlich beschrieben von Dr. Nicolas Straube, Zoologische Staatssammlung München (ZSM): Straube N., Duhamel, G., Gasco N, Kriwet J & Schliewen UK (2011) Description of a new deep-sea Lantern Shark Etmopterus viator sp. nov. (Squaliformes: Etmopteridae) from the Southern Hemisphere. In: The Kerguelen Plateau: marine ecosystems and fisheries G Duhamel & D Welsford D eds.), Société Francaise d`Ichthyologie, pp 137-150
  • 18. How many Species on Earth? Erwin´s Estimate based on fogging data Fogging at the Hainich Forest, Germany. Courtesy: Andreas Floren, University of Würzburg
  • 19. How many Species on Earth? 5 – 30 million species? Only 1.7 million described...
  • 20. How many Species on Earth? Erwin´s Estimate based on fogging data from 19 Luehea seemannii trees (Panama), yielding 1,100 beetles Est. Number of host-specific species Estimated fraction host-specific (%) Trophic group Number species Herbivores 682 20 140 Predators 296 5 15 Fungivores 69 10 7 Scavengers 96 5 5 TOTAL 1,100+ 160 Based on Erwin, T & Scott, JC (1982): Coleopterist´s Bulletin 34, 305and data from May, RM (1986): Nature 324, p. 514
  • 21. How many Species on Earth? Erwin´s Estimate cont´d: from 160 host-specific species of canopy beetles to 30 million arthropod species in total 1. Beetles represent 40% of known arthropods: 400 2. Canopy 2xrich as forest floor 600 3. 50,000 tropical tree species (600x50,000): 30 million
  • 22. Insect diversity in tropical forests www.dorsa.de Guess-timates from fogging the canopy: 30 million (Erwin 1982) - 80 million (Stork 1988) Consensus: 5 million - Ratio described/undescribed: 1:3 .... but how can insect diversity be mapped or monitored, if most species don´t even have a name?
  • 24. Present Extinction Rates: Current Estimates (E.O. Wilson 1990s) Suppositions: •50 % species localised (endemics) •Extinction rate co-varies with forest destruction (habitat specialists, destruction massive) • 5 million species on Earth (conservative!) 0.5 x 5,000 000 x 0.007 = 17,500 species per year (0.007: forest destruction rate per yr)
  • 25. Keine Klimafolge: Neuartiges Artensterben im 50-Jahre Takt ab 1850, Waldwiese in Thüringen: oligotrophente Futterpflanzen erloschen. Ausstellung Berliner Sammlungen nach E. Mey
  • 26. Pursuit of the smallest game...
  • 27. TYPES OF TOMORROW Cerace diehlii Heteroc. Sumatr. 12(3): 155-161 Chironomus sp. WOC Eneoptera sp.
  • 28. Countries of origin of Orthoptera type material deposited in German museums Deutsche Orthopteren Sammlungen - www.dorsa.de
  • 29. GBIF –the Global Biodiversity Information Facility- was established to redress the inequality of data distribution Developing World Biodiversity Developed World Biodiversity Data
  • 32. but: GBIF coverage still insufficient: see groms.gbif.org
  • 33. Distribution: Expected area Outline polygon distributon (cheetah) Point distribution (Eurasian lynx)  Chance observation Kills Raster cell distributon (Iberian lynx)  Occupied  Not occupied Area of occupancy Presence/absence data
  • 34.
  • 35. Advanced monitoring schemes: Databases for single individuals: otters, gorillas, whales.... Humpback fluke identification photos can be catalogued with information about the date and time of the sighting, pod composition, travel direction, and presence / absence of a calf. More than two thousand humpback whales have been individually identified in the North Pacific.
  • 36. Advanced monitoring schemes: Movement tracks (satellite telemetry) Ciconia ciconia - White stork appr. 10,000 data points (1991-2003, MPI Ornithology:Berthold et al.)
  • 37. New technologies: Radar Radio/Satellite/GPS telemetry Genetic fingerprinting/bar-coding Isotope markers Phototraps Acoustic monitoring
  • 41. WWF Living Planet Index The LPI is the average of three separate indices measuring changes in abundance of 555 terrestrial species, 323 freshwater species 267 marine species around the world. LIVING PLANET REPORT 2004
  • 42. WWF Living Planet Index The LPI is the average of three separate indices measuring changes in abundance of 555 terrestrial species, 323 freshwater species 267 marine species around the world. LIVING PLANET REPORT 2004
  • 43. Calculating the Index The Living Planet Database (LPD) holds time-series data for over 10,000 populations of more than 2000 vertebrate species from around the world.The global LPI is calculated using over 7000 of these population time-series which are gathered from a variety of sources such as journals, online databases and government reports. http://www.zsl.org/science/research-projects/indicators-assessments/calculating-the-index, 1227,AR.html
  • 44. Behind the LPI: the GPDD at NERC (Natural Environment Research Centre) http://www3.imperial.ac.uk/cpb/research/patternsandprocesses/gpdd
  • 45. Behind the LPI: the GPDD at NERC (Natural Environment Research Centre) http://www3.imperial.ac.uk/cpb/research/patternsandprocesses/gpdd
  • 46. Behind the LPI: the GPDD at NERC (Natural Environment Research Centre) http://www3.imperial.ac.uk/cpb/research/patternsandprocesses/gpdd
  • 47. comprises conservation assessments for nearly 50,000 species. Around 60% of these are vertebrates.
  • 48. List Index (RLI), which is based on the IUCN Red List of Threatened Species and is an indicator of the relative rate at which the conservation status of certain species groups change over time. How is the SRLI calculated? Red List Index scoresIn a nutshell, the SRLI uses weight scores based on the Red List status of each of the sample species. These scores range from 0 (Least Concern) to Extinct/Extinct in the Wild (5). Summing these scores across all species and relating them to the worst-case scenario - where all species are extinct - gives us an indication of how biodiversity is doing. Repeating the assessments over time will then allow us to see whether the extinction risk of biodiversity is overall increasing, decreasing or staying the same. Red List Calculation For example, this can be seen in the picture at the top of the page which shows the RLI for all birds as calculated by Birdlife Internation in collaboration with the IUCN.
  • 49. Tipping points – H. Mooney, Diversitas 2009
  • 50. Stock data are monitored for economically important species... Catch data: Hunting, Whaling and Fishery Canadian Cod (Gadus morhua, North Atlantic pop)s Fishery Red List: VU; CMS: NL From: The Collapse of the Canadian Cod Fishery , WebCT Courses at University of Toronto http://www.erin.utoronto.ca/~w3env100y/env/ENV100/hum/cod.htm
  • 51. WWF Living Planet Index The LPI is the average of three separate indices measuring changes in abundance of 555 terrestrial species, 323 freshwater species 267 marine species around the world. LIVING PLANET REPORT 2004
  • 53. International Red List Criteria EX EW CR EN VU DD NE EXTINCT THREATENED ...but only mammals and birds were sufficiently evaluated!
  • 54. Global Amphibian Assessment The GAA assessed threat status and distribution for each of the 5,743 amphibian species known to science. 35 EXTINCT/EW More than 520 scientists from over 60 countries contributed to the three-year study. Results provide a baseline for global amphibian conservation, and will be used to design strategies to save the world’s rapidly declining amphibian populations 427 Critically Endangered The Panamanian golden frog is one of roughly 110 species of harlequin frog (Atelopus), many of which are dying out. Although this species still survives, its numbers have fallen significantly.
  • 55.
  • 56. EuMon Search for insect monitoring schemes