Some Physical Systems Based on 2-D Granular Model: From Locomotive Organs to Asteroid Construction
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Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications, Osaka University, Japan, 9 August 2017
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Some Physical Systems Based on 2-D Granular Model: From Locomotive Organs to Asteroid Construction
- 1. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 1 Some Physical Systems Based on 2-D Granular Model: From Locomotive Organs to Asteroid Construction S. Viridi1,2,* , A. Purqon1 , R. Mauludin3 , N. Nuraini4 , V. Suendo5 , F. Haryanto1 , B. Dermawan6 , S. N. Khotimah1 , Widayani1 , M. A. Martoprawiro5 , Suprijadi1,2 , M. Abdullah1, L.Hendrajaya1 1 Phyiscs Department, Institut Teknologi Bandung, Jalan Ganesa 10, Bandung 40132, Indonesia 2 Research Center for Nanosciences and Nanotechnology, Jalan Ganesa 10, Bandung 40132, Indonesia 3 School of Pharmacy, Institut Teknologi Bandung, Jalan Ganesa 10, Bandung 40132, Indonesia 4 Mathematics Department, Institut Teknologi Bandung, Jalan Ganesa 10, Bandung 40132, Indonesia 5 Chemistry Department, Institut Teknologi Bandung, Jalan Ganesa 10, Bandung 40132, Indonesia 6 Astronomy Department, Institut Teknologi Bandung, Jalan Ganesa 10, Bandung 40132, Indonesia *dudung@fi.itb.ac.id
- 2. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 2 Outline • Molecular dynamics method • Some physical systems: Locomotive organ, Tablet dissolution, Particle deposition, Yeast colony development, Tree vibration model, Rotary kiln, Asteroid construction • Summaries
- 3. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 3 Molecular dynamics method
- 4. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 4 Molecular dynamics method • Newton’s second law of motion • Euler algorithm ( ) ( ) ( ) ( ) ( )[ ] ( ) ( )[ ] ∑≠ + = ij i iiijijiij i m tvtrFtvtvtrtrF ta ,,,, ( ) ( ) ( ) ttatvttv iii ∆+=∆+ ( ) ( ) ( ) tttvtrttr iii ∆∆++=∆+
- 5. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 5 Locomotive organ
- 6. Motion based on pressure • Force due to cell swelling and shrinking • Systems of cells: 1, 2, and 3 Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 6 S. Viridi, N. Nuraini, "Self-Motion Mechanism of Chained Spherical Grains Cells", in Symposium on Biomathematics-2013, edited by H. Arimura et al., AIP Conference Proceedings 1587, American Institute of Physics, Melville, NY, 2014, pp. 123-126. ∫= i i ApdF
- 7. Results Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 7 no displacement
- 8. Motion based on friction • Spring force for "muscle“ • Drag force from fluid environment Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 8 ( ) ijijijijij rlrkS ˆ−−= ( ) fi fi dfi vv vv CAD − − = 2 2 1 ρ S. Viridi, N. Nuraini, "Simulation of Single Microorganism Motion in Fluid based on Granular Model", in Symposium on Biomathematics-2015, edited by Y. Takeuchi and M. Apri, AIP Conference Proceedings 1723, American Institute of Physics, Melville, NY, 2016, pp. 030022.
- 9. In phase or out of phase? Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 9 http://www.uky.edu/Classes/ENT/574/insects/ soybean_insects/gcw/gcw_images.htm in phase with muscle oscillation out of phase with muscle oscillation
- 10. Results (φD – φS = π/2) Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 10
- 11. Multiple locomotive organ • How about multiple organ? Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 11 N. Nuraini, S. Viridi, F. Haryanto, S. N. Khotimah, "Molecular Dynamics Simulation of Microorganism Motion in Fluid Based on Granular Model in the Case of Multiple Simple Push-Pull filaments", in Symposium on Biomathematics-2016, edited by B. Benyamin and Kasbawati, AIP Conference Proceedings 1825, American Institute of Physics, Melville, NY, 2017, pp. 020016.
- 12. Results: Δφj,j+1 = 2π/M Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 12
- 13. Re..: M = 4, φj/T = 0.3, 0.4, 0.5, 0.6 Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 13
- 14. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 14 Tablet dissolution
- 15. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 15 Model • Cluster of particles > ≤− = ,,0 ,,ˆ2 Gij Gijij ij ji G ij Rr Rrr r mm k G S. Viridi, Suprijadi, R. Mauludin, H. Hertiasa, "Modeling of Two-Dimension Solid Dissolution Based on Granular Particle Interaction: A Simple Approach for Tablet Dissolution Simulation in 2-D", ICPAPS, Yogyakarta, Indonesia, 7-8 September 2015, viXra:1510.0403 | 2015-10-27.
- 16. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 16 Model (cont.) • Interaction between clusters of particles ij ij NijijNij v dt d rkN ˆˆ ξ γξ −=
- 17. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 17 Dissolution mechanism • Fluid particles erode the aggregate (tablet)
- 18. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 18 Results
- 19. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 19
- 20. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 20 Particle deposition
- 21. Model • Sudden "sticky" force >> other forces Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 21 S. Viridi, Suprijadi, V. Suendo, "Simulasi Deposisi Berdasarkan Penumbuhan Butiran Menggunakan Dinamika Molekular", Research and Development on Nanotechnology in Indonesia 2 (2), 68-79 (2015).
- 22. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 22 Results
- 23. Results (cont.) Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 23
- 24. Porosity of (3-d) particle system • Short range repulsive force between grains • Gravitation Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 24 R. R. Septiawan, S. Viridi, Suprijadi, "The Effect of Particle Size Ratio on Porosity of a Particles Deposition Process", Key Engineering Materials 675-676 (6), 647-650 (2016). ij ij NijijNij v dt d rkN ˆˆ ξ γξ −= gmG ii =
- 25. Results: Binary mixture Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 25
- 26. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 26 Yeast colony development
- 27. Model • Similar attractive force as previous • repulsion force Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 27 D Aprianti, S. N. Khotimah, S. Viridi, "Budding Yeast Colony Growth Study Based on Circular Granular Cell", Journal of Physics: Conference Series 739 (1), 012026 (2016). ij ij ji Gij r r mm kG ˆ2 −= ij ij NijijNij v dt d rkN ˆˆ ξ γξ −=
- 28. Model (cont.) • also viscous force • and new cell birth and growth Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 28 ii vDD ηπ3−=
- 29. Results Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 29
- 30. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 30 D. Aprianti, F. Haryanto, A. Purqon, S. N. Khotimah, S. Viridi, "Study of Budding Yeast Colony Formation and its Characterizations by using Circular Granular Cell", Journal of Physics: Conference Series 694 (1), 012079 (2016). θ1=π/4, θ2=0, π/4, θ3=π/2, 5π/4, π, θ4=0, π/2, π, 3π/2
- 31. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 31 Tree vibration model
- 32. Tree model Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 32 S. Viridi, P. Patana, S. A. Subrata, H. Hertiasa, M. Abdullah, "In Searching of Trees Natural Vibration Frequency Based on Granular Particles Interactions and Vibration", Proceedings of International Seminar on Biological Sciences (ISBS 2015), Eds. P. Paton et al., Medan, Indonesia, 17 October 2015, pp. 113-122.
- 33. Forces • Gravitation • Drag force from wind • Bending force among three particles Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 33 gmG ii = ( )wii vvDD −−= ηπ3 ( ) ( )ijkijjkij ij B ijkij ij B ijk rrr r c r r c B θτ ˆˆ1ˆ 2 ˆ ⋅−×−=×=
- 34. Results Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 34
- 35. Results (cont.) Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 35
- 36. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 36 Rotary kiln
- 37. Model • Normal force • Gravitation • Rotating liner Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 37 R. Sari, P. M. Widartiningsih, M. A. Martoprawiro, L. Hendrajaya, S. Viridi, "Simulation of Semi-Autogenous Grinding (SAG) Mill using Circular- Disks-based Model", ICCSE 2017, Indonesia, Bandung, 10-12 July 2017. ij ij NijijN N ij v dt d rkF ˆˆ ξ γξ −= gmG ii =
- 38. Results Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 38
- 39. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 39 Asteroid construction
- 40. Model • Attractive force (similar as previous) • and repulsion force Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 40 S. Viridi, B. Dermawan, "Cluster compaction of two-dimension spherical particles binary mixture as model of forming process of an asteroid", Journal of Physics: Conference Series 771 (1), 012028 (2016). ij ij ji G G r r mm kFij ˆ2 −= ij ij NijijN N ij v dt d rkF ˆˆ ξ γξ −=
- 41. Forces range Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 41
- 42. Results Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 42
- 43. Monodispersed system Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 43 S. Viridi, B. Dermawan, "Tumbukan Tak-Elastik Partikel sebagai Model Terbentuknya Asteroid", Spektra: Jurnal Fisika dan Aplikasinya 2 (1), 53-60 (2017).
- 44. Attractive force between intruder? Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 44 P. M. Widartiningsih, S. N. Khotimah, B. Dermawan, S. Viridi, "Simulasi Pembentukan Asteroid dengan Variasi Massa dan Ukuran Partikel", SENFA 2017, Indonesia, Jatinangor, 22 Juli 2017.
- 45. Evolution Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 45
- 46. Final distance between intruders Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 46
- 47. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 47 Summaries
- 48. Summaries • A (2-d) granular based model can be used in some of physical systems with different scales • But it is still lack of experiment confirmation Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 48
- 49. Acknowledgment • Visit to Osaka University is supported by research scheme PUPT from Kemenristekdikti of Republik Indonesia in year 2017 with principal investigator Prof. Bobby Eka Gunara Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 49
- 50. Osaka University, Japan, 9 August 2017 Quantum Engineering Design Workshop on Materials Design and Instrumentation for Clean Energy Applications 50 Thank you