BASICS OF BIOLOGICAL
   CLASSIFICATION
Prokaryotic Cell
Eukaryotic Cell
 Autotrophs  capture the light energy from
 sunlight and convert it to chemical energy
 they use for food.

 Heterotrophs must get energy by eating
 autotrophs or other heterotrophs.

 Decomposers, aka saprobes, are heterotrophs
  that recycle dead organisms by breaking them
 down.
•Phylogeny
•Classification   •Order
                                 •Systematics
•Taxonomy         •Family
                                 Hypothesis
•Aristotle        •Genus
                                 •Cladistics
•Linnaeus         •Species
                                 •Derived
•Kingdom          •Common name
                                 character
•Phylum           •Scientific
                                 •Cladogram
•Class            name
                                 •Dichotomous
                  •Binomial
                                 Key
                  nomenclature
• Taxonomy is the science of grouping
  and naming organisms.

• Classification the grouping of
  information or objects based on
  similarities.
•We only know about a fraction of the
 organisms that exist or have existed on Earth.

•Taxonomists give a unique scientific name to
 each species they know about whether it’s alive
 today or extinct.

• The scientific name comes from one of two
 “dead” languages – Latin or ancient Greek.

Why use a dead language?
Devil Cat
Ghost Cat
Mountain Lion
Screaming Cat
Puma
Florida Panther
Cougar
•There are at least 50 common names for
 the animal shown on the previous 7 slides.

•Common names vary according to region.

•Soooo……why use a scientific name?
Binomial Nomenclature

•a two name system for writing scientific names.
•The genus name is written first (always Capitalized).

•The species name is written second (never capitalized).

•Both words are
  italicized if typed or underlined if hand written.

Example: Felis concolor or F. concolor

Which is the genus? The species?
"Formal" scientific names should have a third
part, the authority.
    The authority is not italicized or underlined.
The authority is written as an abbreviation of
the last name of the person responsible for
naming the organism. Since Carolus Linnaeus
was the first person to name many plants, the L.
for Linnaeus is very common in plant scientific
names.
An example is Quercus alba L.
Phylogeny, the evolutionary history of an
organism, is the cornerstone of a branch of
biology called systematic taxonomy.

Systematics, as systematic taxonomy is
commonly called, is the study of the
evolution of biological diversity.
A phylogenetic tree is a family tree
that shows a hypothesis about the
evolutionary relationships thought to
exist among groups of organisms. It
does not show the actual evolutionary
history of organisms.

Why a hypothesis?
Phylogenetic trees are usually based on a
combination of these lines of evidence:
     Fossil record

      Morphology

      Embryological patterns of
      development

      Chromosomes and DNA
Fossil
Morphology
Homologous
     Structures
modifies
             homologous
                     structures


Adaptive Radiation -
               Modifies homologous structures
Convergent Evolution
 These animals have evolved similar adaptations
for obtaining food because they occupy similar
niches. What can you infer about their
phylogeny from their geographic locations?
Convergent evolution leads to……….

Analogous Structures -
•Traits that are morphologically and
 functionally similar even though there
 is no common ancestor.
Embryology
Cladistics - is a relatively new
system of phylogenetics
classification that uses shared
derived characters to establish
evolutionary relationships. A
derived character is a feature
that apparently evolved only
within the group under
consideration.
DNA
There are three basic assumptions
in cladistics:

  1.Organisms within a group are
  descended from a common
  ancestor.

  2.There is a bifurcating pattern of
  cladogenesis.

  3.Change in characteristics
  occurs in lineages over time.
A phylogenetic tree based on a
cladistic analysis is called a
cladogram.

What derived character is shared by
all the animals on the cladogram on
the next slide?
The acacia and its
ants are an example
of coevolution. Each
influences the others
evolution.

Can you think of any
other examples of
coevolution?
Punctuated Equilibrium

“instead of a slow, continuous
movement, evolution tends to be
characterized by long periods of virtual
standstill ("equilibrium"), "punctuated" by
episodes of very fast development of new
forms”

The "punctuated equilibrium" theory of Niles
Eldredge and Stephen Jay Gould was proposed
as a criticism of the traditional Darwinian
theory of evolution…what is it called?
The Dichotomous Key
• A key is a device for easily and quickly
identifying
 an unknown organism.

• The dichotomous key is the most widely used
type in biological sciences.

• The user is presented with a sequence of
choices between two
statements, couplets, based on characteristics
of the organism. By always making the correct
choice, the name of the organism will be
revealed.
A. one pair of wings

1.
     B. Two pairs of wings
• Domain Archaea
     – Includes newly discovered cell types
The Three Domains
     – Contains 1 kingdom – the Archaebacteria

•Domain Bacteria
      – Includes other members of old kingdom Monera
      – Has 1 kingdom – the Eubacteria


•Domain Eukarya
– Includes all kingdoms composed of organisms made
  up of eukaryotic cells
         – Protista
         – Fungi
         – Animalia
         – Plantae
The major classification levels,
 from most general to most specific
      (several of these have subdivisions)




A group at any level is a taxon.
Categories within Kingdoms

Kingdoms are divided into groups called phyla

 Phyla are subdivided into classes
   Classes are subdivided into orders
     Orders are subdivided into families

       Families are divided into genera

          Genera contain closely related species

             Species is unique
Taxonomy 1

Taxonomy 1

  • 1.
    BASICS OF BIOLOGICAL CLASSIFICATION
  • 2.
  • 3.
  • 4.
     Autotrophs capture the light energy from sunlight and convert it to chemical energy they use for food.  Heterotrophs must get energy by eating autotrophs or other heterotrophs.  Decomposers, aka saprobes, are heterotrophs that recycle dead organisms by breaking them down.
  • 6.
    •Phylogeny •Classification •Order •Systematics •Taxonomy •Family Hypothesis •Aristotle •Genus •Cladistics •Linnaeus •Species •Derived •Kingdom •Common name character •Phylum •Scientific •Cladogram •Class name •Dichotomous •Binomial Key nomenclature
  • 7.
    • Taxonomy isthe science of grouping and naming organisms. • Classification the grouping of information or objects based on similarities.
  • 8.
    •We only knowabout a fraction of the organisms that exist or have existed on Earth. •Taxonomists give a unique scientific name to each species they know about whether it’s alive today or extinct. • The scientific name comes from one of two “dead” languages – Latin or ancient Greek. Why use a dead language?
  • 9.
  • 10.
  • 11.
  • 12.
  • 13.
  • 14.
  • 15.
  • 16.
    •There are atleast 50 common names for the animal shown on the previous 7 slides. •Common names vary according to region. •Soooo……why use a scientific name?
  • 17.
    Binomial Nomenclature •a twoname system for writing scientific names. •The genus name is written first (always Capitalized). •The species name is written second (never capitalized). •Both words are italicized if typed or underlined if hand written. Example: Felis concolor or F. concolor Which is the genus? The species?
  • 18.
    "Formal" scientific namesshould have a third part, the authority. The authority is not italicized or underlined. The authority is written as an abbreviation of the last name of the person responsible for naming the organism. Since Carolus Linnaeus was the first person to name many plants, the L. for Linnaeus is very common in plant scientific names. An example is Quercus alba L.
  • 19.
    Phylogeny, the evolutionaryhistory of an organism, is the cornerstone of a branch of biology called systematic taxonomy. Systematics, as systematic taxonomy is commonly called, is the study of the evolution of biological diversity.
  • 20.
    A phylogenetic treeis a family tree that shows a hypothesis about the evolutionary relationships thought to exist among groups of organisms. It does not show the actual evolutionary history of organisms. Why a hypothesis?
  • 22.
    Phylogenetic trees areusually based on a combination of these lines of evidence: Fossil record Morphology Embryological patterns of development Chromosomes and DNA
  • 23.
  • 24.
  • 25.
    Homologous Structures
  • 26.
    modifies homologous structures Adaptive Radiation - Modifies homologous structures
  • 28.
    Convergent Evolution Theseanimals have evolved similar adaptations for obtaining food because they occupy similar niches. What can you infer about their phylogeny from their geographic locations?
  • 29.
    Convergent evolution leadsto………. Analogous Structures - •Traits that are morphologically and functionally similar even though there is no common ancestor.
  • 33.
  • 34.
    Cladistics - isa relatively new system of phylogenetics classification that uses shared derived characters to establish evolutionary relationships. A derived character is a feature that apparently evolved only within the group under consideration.
  • 35.
  • 36.
    There are threebasic assumptions in cladistics: 1.Organisms within a group are descended from a common ancestor. 2.There is a bifurcating pattern of cladogenesis. 3.Change in characteristics occurs in lineages over time.
  • 37.
    A phylogenetic treebased on a cladistic analysis is called a cladogram. What derived character is shared by all the animals on the cladogram on the next slide?
  • 39.
    The acacia andits ants are an example of coevolution. Each influences the others evolution. Can you think of any other examples of coevolution?
  • 40.
    Punctuated Equilibrium “instead ofa slow, continuous movement, evolution tends to be characterized by long periods of virtual standstill ("equilibrium"), "punctuated" by episodes of very fast development of new forms” The "punctuated equilibrium" theory of Niles Eldredge and Stephen Jay Gould was proposed as a criticism of the traditional Darwinian theory of evolution…what is it called?
  • 41.
    The Dichotomous Key •A key is a device for easily and quickly identifying an unknown organism. • The dichotomous key is the most widely used type in biological sciences. • The user is presented with a sequence of choices between two statements, couplets, based on characteristics of the organism. By always making the correct choice, the name of the organism will be revealed.
  • 43.
    A. one pairof wings 1. B. Two pairs of wings
  • 44.
    • Domain Archaea – Includes newly discovered cell types The Three Domains – Contains 1 kingdom – the Archaebacteria •Domain Bacteria – Includes other members of old kingdom Monera – Has 1 kingdom – the Eubacteria •Domain Eukarya – Includes all kingdoms composed of organisms made up of eukaryotic cells – Protista – Fungi – Animalia – Plantae
  • 45.
    The major classificationlevels, from most general to most specific (several of these have subdivisions) A group at any level is a taxon.
  • 46.
    Categories within Kingdoms Kingdomsare divided into groups called phyla Phyla are subdivided into classes Classes are subdivided into orders Orders are subdivided into families Families are divided into genera Genera contain closely related species Species is unique