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PLANT PHYSIOLOGY
SUBMITTED TO,
DR. AGHIL SOORYA. A
ASSISTANT PROFESSOR
DEPT OF BOTANY
ST TERESA’S COLLEGE
SUBMITTED BY,
SILPA SELVARAJ
ROLL NO: 13
I MSC BOTANY
ST TERESA’S COLLEGE
1
INTRODUCTION
 Membranes participate in many aspects of cell structure and function.
 They separate intracellular and extracellular environments.
 Membranes also define the intracellular organelles like mitochondria, chloroplast,
nucleus, lysosome etc.
 These bio membranes have the same basic architecture.
 By preventing the unassisted movement of water soluble molecules, the
phospholipid bilayer act as a permeability barrier.
 The embedded proteins in the membrane helps in the regulated transport of
substances .
2
STRUCTURE OF BIOLOGICAL MEMBRANE
3
PLASMODESMATA
 Singular : plasmodesma.
 It is the microscopic cytoplasmic linkage between two adjacent cells.
 Helps in the communication between cells.
 Regulation of passage of molecules between the plant cells.
 2 types;
 Primary plasmodesmata : forms during cell division.
 Secondary plasmodesmata : between mature cells.
4
 Primary plasmodesmata are formed when fractions of ER are trapped across the
middle lamella as new cell wall is synthesized between two newly dividing cells.
 They eventually becomes cytoplasmic connections between the cells.
5
STRUCTURE OF PLASMODESMATA
 A plant cell contains 1000-1,00,000 plasmodesmata.
 Diameter is approximately ranged from 50-60-nm.
 3 main components;
 Plasma membrane
 Desmotubule
 Cytoplasmic sleeve
6
 1. Plasma membrane
 The plasma membrane portion of the plasmodesmata is continuous extension of the
cell membrane and has a similar phospholipid bilayer structure.
 2. Cytoplasmic sleeve
 It is a fluid filled space and it is the continuous extension of the cytosol.
 Movement of molecules occur through this space.
 3. Desmotubule
 It is a tube of appressed ER.
 Some molecules are known to be transported through desmotubule.
7
 In some cases, around the desmotubule, certain structures are present that may
split the plasmodesma into small channels.
 These structures may be made of myosin or actin .
 Smaller molecules and ions can easily pass through the plasmodesmata by
diffusion without the need of additional energy.
 Larger molecules like proteins, RNA etc can also pass through the cytoplasmic
sleeve diffusively.
8
 Mechanism of pore size regulation
 Accumulation of polysaccharide callose around the neck region to form a collar.
 This reduces the diameter of the pore which is available for the transport.
 Through dilation, active gating or structural remodelling the permeability can be
increased.
 This increase in the size of the pore allows larger molecules like signalling
molecules, RNA protein complexes etc to be transported to the adjacent cells.
 Gene responsible for callus synthesis and deposition is Cals3.
9
PORINS
 Porins are beta barrel proteins that act as a pore through
which molecules can diffuse through.
 They are quite larger in size.
 Involved in passive transport.
 Present on the outer membrane of gram negative bacteria,
outer membrane of mitochondria, outer membrane of
chloroplast etc.
 Eg : aquaporins
10
 Structure
 Porins are composed of beta sheets which are made of beta strands .
 Beta strands are linked together by beta turns on the cytoplasmic side and amino acid
loops on the other side.
 The beta strands lie in antiparallel direction and they form a cylindrical structure called
beta barrel.
 The amino acids of the beta strands bear polar and nonpolar residues.
 Non polar residues face outwards to interact with the non polar lipids.
 Polar residues face inwards to the centre to create the aqueous channel.
 Majority : monomers, but dimeric to octameric porins have been discovered.
PORINS
11
MEMBRANE
POTENTIAL
• It is the difference in the
electrical charge between
the inside and outside of the
membrane.
• Denoted by millivolt. (Mv)
12
 Electrical potential difference across the cell membrane is called membrane
potential.
 Inside the cell is negative and outside is positive. (how? Lets see !)
 On the basis of charge : outer side – positively charged
inner side negatively charged.
 On the basis of ions : outside - Na+ concentration – high.
inside – K+ concentration - high.
13
+++++++++++++++++++++++
+++
- - - - - - - - - - - - - - - - - - - - - - -
- -
Cell membrane
• Outside ;
• Sodium ions - high.
• Chloride ions – high.
• Potassium ions – very low.
• Inside ;
• Potassium ions – high.
• Proteins (A-) – high.
• Sodium ions – very low.
• Chloride ions – very low.
Cell membrane
14
 Sodium has few leakage (non gated) channels, it can mostly move through gated channels.
 Potassium has leakage channels as well as voltage channels.
 As the concentration of potassium ions are more inside the cell and less outside the cell, they will
move to the area of lower concentration via the leakage channels.
 As a result the outer side of the cell membrane becomes more positive.
 Inner side of the cell membrane becomes more negative.
 As K+ leaves the cell, negativity increases on the inside of the cell membrane and electrostatically
attracts K+ ions that have gone to outside.
 This electrostatic force prevents the potassium ions from leaving the cell.
 Passive efflux of K+ > passive influx of Na+ ; helps in establishing and maintaining membrane
potential.
15
ION CHANNELS
 Ion channels are proteins present in the membrane that helps in the transport of
ions across the membrane.
 Highly selective in the type of ion transported.
 Passive mechanism.
 2 types ;
16
 Ligand gated ion channels
 Ligand gated ion channels open or close in response to the binding of a ligand.
 Binding of the ligand causes the opening of the closed channel.
 Ligand – neurotransmitters.
17
 Voltage gated ion channels
 Open and close in response to membrane potential.
 Conformational changes in response to the potential gradient.
 Enables the passage of selected ions.
 E.g. ; potassium ion channels, sodium ion channels etc.
18
POTASSIUM ION CHANNELS
( kv channels)
 Found in almost all species except in some parasites.
 No other ions can pass through this channel except
potassium.
 Consist of 6 transmembrane alpha helices (S1-S6) .
 S1-S4 constitute of voltage sensor .
 S4 act as the major voltage sensor. It contain positively
charged residues which are responsible for the voltage
sensing mechanism.
 S5-S6 constitute the pore domain.
 In between S5 and S6 selectivity filter is present. This
filter ensures that only K+ ions pass through this channel.
19
20
a b
 There are two alternative states ;
 Closed state : voltage sensor is at the lower portion.
 Open state : voltage sensor is pushed upwards.
 So in the open state, the pore is open and K+ ions can pass
through this pore.
21
22
-80 -40 +40 +80
0
Voltage (mV)
Current
(A)
• At a –ve membrane voltage, the
inside of the membrane is highly -
ve.
• So there will an attraction between
the +ve charges in the voltage
sensor and the –ve charge at inside
of the membrane.
• So, the pore will remain in a closed
state.
----------
--
----
-
• At a +ve membrane voltage, the
inside of the membrane would be
positive.
• So there will be a net repulsion
between the +ve charges of the
voltage sensor and the +ve charges
of the inside of the membrane.
• It will push the voltage sensor to
outwards and the pore opens.
+++++++ ++++++
+
REFERENCE
 https://microbenotes.com/plasmodesmata-structure-and-functions.
 https://www.nature.com/articles/nrn727.
 https://www.science.org/doi/10.1126/science.280.5360.69
 https://www.vedantu.com/question-answer/what-are-porins-class-11-biology-
cbse-605aa58fd1abc72e1efaafaa
 https://chem.libretexts.org/Bookshelves/Analytical_Chemistry/Supplemental_Mod
ules_(Analytical_Chemistry)/Electrochemistry/Exemplars/Membrane_Potentials
 Lodish, H.(2000) Molecular cell biology. W.H Freeman and company.
23
Thank you
24

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plasmodesmata, porins, ion channels, membrane potential

  • 1. PLANT PHYSIOLOGY SUBMITTED TO, DR. AGHIL SOORYA. A ASSISTANT PROFESSOR DEPT OF BOTANY ST TERESA’S COLLEGE SUBMITTED BY, SILPA SELVARAJ ROLL NO: 13 I MSC BOTANY ST TERESA’S COLLEGE 1
  • 2. INTRODUCTION  Membranes participate in many aspects of cell structure and function.  They separate intracellular and extracellular environments.  Membranes also define the intracellular organelles like mitochondria, chloroplast, nucleus, lysosome etc.  These bio membranes have the same basic architecture.  By preventing the unassisted movement of water soluble molecules, the phospholipid bilayer act as a permeability barrier.  The embedded proteins in the membrane helps in the regulated transport of substances . 2
  • 4. PLASMODESMATA  Singular : plasmodesma.  It is the microscopic cytoplasmic linkage between two adjacent cells.  Helps in the communication between cells.  Regulation of passage of molecules between the plant cells.  2 types;  Primary plasmodesmata : forms during cell division.  Secondary plasmodesmata : between mature cells. 4
  • 5.  Primary plasmodesmata are formed when fractions of ER are trapped across the middle lamella as new cell wall is synthesized between two newly dividing cells.  They eventually becomes cytoplasmic connections between the cells. 5
  • 6. STRUCTURE OF PLASMODESMATA  A plant cell contains 1000-1,00,000 plasmodesmata.  Diameter is approximately ranged from 50-60-nm.  3 main components;  Plasma membrane  Desmotubule  Cytoplasmic sleeve 6
  • 7.  1. Plasma membrane  The plasma membrane portion of the plasmodesmata is continuous extension of the cell membrane and has a similar phospholipid bilayer structure.  2. Cytoplasmic sleeve  It is a fluid filled space and it is the continuous extension of the cytosol.  Movement of molecules occur through this space.  3. Desmotubule  It is a tube of appressed ER.  Some molecules are known to be transported through desmotubule. 7
  • 8.  In some cases, around the desmotubule, certain structures are present that may split the plasmodesma into small channels.  These structures may be made of myosin or actin .  Smaller molecules and ions can easily pass through the plasmodesmata by diffusion without the need of additional energy.  Larger molecules like proteins, RNA etc can also pass through the cytoplasmic sleeve diffusively. 8
  • 9.  Mechanism of pore size regulation  Accumulation of polysaccharide callose around the neck region to form a collar.  This reduces the diameter of the pore which is available for the transport.  Through dilation, active gating or structural remodelling the permeability can be increased.  This increase in the size of the pore allows larger molecules like signalling molecules, RNA protein complexes etc to be transported to the adjacent cells.  Gene responsible for callus synthesis and deposition is Cals3. 9
  • 10. PORINS  Porins are beta barrel proteins that act as a pore through which molecules can diffuse through.  They are quite larger in size.  Involved in passive transport.  Present on the outer membrane of gram negative bacteria, outer membrane of mitochondria, outer membrane of chloroplast etc.  Eg : aquaporins 10
  • 11.  Structure  Porins are composed of beta sheets which are made of beta strands .  Beta strands are linked together by beta turns on the cytoplasmic side and amino acid loops on the other side.  The beta strands lie in antiparallel direction and they form a cylindrical structure called beta barrel.  The amino acids of the beta strands bear polar and nonpolar residues.  Non polar residues face outwards to interact with the non polar lipids.  Polar residues face inwards to the centre to create the aqueous channel.  Majority : monomers, but dimeric to octameric porins have been discovered. PORINS 11
  • 12. MEMBRANE POTENTIAL • It is the difference in the electrical charge between the inside and outside of the membrane. • Denoted by millivolt. (Mv) 12
  • 13.  Electrical potential difference across the cell membrane is called membrane potential.  Inside the cell is negative and outside is positive. (how? Lets see !)  On the basis of charge : outer side – positively charged inner side negatively charged.  On the basis of ions : outside - Na+ concentration – high. inside – K+ concentration - high. 13 +++++++++++++++++++++++ +++ - - - - - - - - - - - - - - - - - - - - - - - - - Cell membrane
  • 14. • Outside ; • Sodium ions - high. • Chloride ions – high. • Potassium ions – very low. • Inside ; • Potassium ions – high. • Proteins (A-) – high. • Sodium ions – very low. • Chloride ions – very low. Cell membrane 14
  • 15.  Sodium has few leakage (non gated) channels, it can mostly move through gated channels.  Potassium has leakage channels as well as voltage channels.  As the concentration of potassium ions are more inside the cell and less outside the cell, they will move to the area of lower concentration via the leakage channels.  As a result the outer side of the cell membrane becomes more positive.  Inner side of the cell membrane becomes more negative.  As K+ leaves the cell, negativity increases on the inside of the cell membrane and electrostatically attracts K+ ions that have gone to outside.  This electrostatic force prevents the potassium ions from leaving the cell.  Passive efflux of K+ > passive influx of Na+ ; helps in establishing and maintaining membrane potential. 15
  • 16. ION CHANNELS  Ion channels are proteins present in the membrane that helps in the transport of ions across the membrane.  Highly selective in the type of ion transported.  Passive mechanism.  2 types ; 16
  • 17.  Ligand gated ion channels  Ligand gated ion channels open or close in response to the binding of a ligand.  Binding of the ligand causes the opening of the closed channel.  Ligand – neurotransmitters. 17
  • 18.  Voltage gated ion channels  Open and close in response to membrane potential.  Conformational changes in response to the potential gradient.  Enables the passage of selected ions.  E.g. ; potassium ion channels, sodium ion channels etc. 18
  • 19. POTASSIUM ION CHANNELS ( kv channels)  Found in almost all species except in some parasites.  No other ions can pass through this channel except potassium.  Consist of 6 transmembrane alpha helices (S1-S6) .  S1-S4 constitute of voltage sensor .  S4 act as the major voltage sensor. It contain positively charged residues which are responsible for the voltage sensing mechanism.  S5-S6 constitute the pore domain.  In between S5 and S6 selectivity filter is present. This filter ensures that only K+ ions pass through this channel. 19
  • 21.  There are two alternative states ;  Closed state : voltage sensor is at the lower portion.  Open state : voltage sensor is pushed upwards.  So in the open state, the pore is open and K+ ions can pass through this pore. 21
  • 22. 22 -80 -40 +40 +80 0 Voltage (mV) Current (A) • At a –ve membrane voltage, the inside of the membrane is highly - ve. • So there will an attraction between the +ve charges in the voltage sensor and the –ve charge at inside of the membrane. • So, the pore will remain in a closed state. ---------- -- ---- - • At a +ve membrane voltage, the inside of the membrane would be positive. • So there will be a net repulsion between the +ve charges of the voltage sensor and the +ve charges of the inside of the membrane. • It will push the voltage sensor to outwards and the pore opens. +++++++ ++++++ +
  • 23. REFERENCE  https://microbenotes.com/plasmodesmata-structure-and-functions.  https://www.nature.com/articles/nrn727.  https://www.science.org/doi/10.1126/science.280.5360.69  https://www.vedantu.com/question-answer/what-are-porins-class-11-biology- cbse-605aa58fd1abc72e1efaafaa  https://chem.libretexts.org/Bookshelves/Analytical_Chemistry/Supplemental_Mod ules_(Analytical_Chemistry)/Electrochemistry/Exemplars/Membrane_Potentials  Lodish, H.(2000) Molecular cell biology. W.H Freeman and company. 23