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Contents
• Introduction
• Classification
• Advantages and Disadvantages
• Method of preparation
• Peptidomimetics Drug Design Principle
• Chemistry and stereochemistry
• Synthesis
• Therapeutic value of peptidomimetics
Introduction
• A small protein – like chain designed to mimic a peptide , have
no peptide bonds and MW<700D
• Arise either from –
 Modification of an existing peptide,
 or by designing similar systems that mimics peptides, such as
peptoids and β-peptides.
• Altered chemical structure is designed to adjust the molecular
properties as, stability or biological activity.
Defination
 Peptidomimetics are
chemical structures derived
from bioactive peptides
which imitate natural
molecules.
 A peptidomimetics is a
small protein – like chain
designed to mimic a
peptide. They typically arise
either from modification of
an existing peptide, or by
designing similar system
that mimic peptides, such
as peptoids and β-peptides .
Classification
Chart No: 1
Class A
• Modified peptides: peptides mainly formed by α-amino acids
with minor side chain or backbone alterations.
Class B
• Modified peptides/ foldamers: peptides with various
backbone and side chain alteration also including foldamers.
Class C
• Structural mimetics: small molecules-like scaffolds that
project substituents in analogy to peptide side chains.
Class D
• Mechanistic mimetics: molecules that mimics the mode of
action of a peptides without direct link to its side chains.
Advantages and Disadvantages
 Advantages of Peptidomimetics as Drugs
1. Conformationally restrained structures
can minimize binding to non-target
receptors and enhance the activity at the
desired receptor.
2. Addition of hydrophobic residues and/or
replacement of amide bonds results in
better transport properties through
cellular membranes.
3. Isosteres, retro-inverso peptides, cyclic
peptides and non-peptidomimetics all
reduce the rate of degradation by
peptidases and other enzymes.
 Disadvantages of Peptides as Drugs
1. Limited stability towards proteolysis
by peptidases in the gastroeintesinal tract
and in serum (t1/2 on the order of
minutes)
2. Poor transport properties from the
intestine to the blood and across the
blood-brain barrie due to high MW and
lack of specific transport systems
3. Rapid excretion through the liver and/or
kidneys
4. Inherent flexibility enables interaction
with multiple receptors besides the target,
and could result in undesired side-effects
Methods of modification
Retro-Inverso Peptidomimetics
Morphine: a Non-peptidomimetics
For Enkephaline
Somatostatine:Early Investigations
Peptidomimetic HIV-1 Protease
Inhibitors
Peptidomimetics Drug Design Principle
Chemistry and Stereochemistry
Synthesis
Therapeutic Value of Peptidomimetics
INNs Brand names Length Sequences Companies Indications Half-life
Daptomycin Cubicin 13 aa N-Decanoyl-Trp-Asp-Asp-
threonylglycyl-ornithyl-Asp-D-
alanyl- aspartylglycyl-D-seryl-
threo-3-methyl- glutamyl-3-
anthraniloyl-alanine[egr]1-
lactone
Cubist
Pharmaceutical
s
Antibiotic used to treat
systemic and life-
threatening infections
caused by Gram-
positive organisms
8–9
hours
Afamelanotid
e
Scenesse 13 aa Ac-Ser-Tyr-Ser-Nle-Glu-His-D-
Phe-Arg- Trp-Gly-Lys-Pro-Val-
NH2
Clinuvel
Pharmaceutical
s
Erythropoietic
porphyries
100 min
Eptifibatide Integrilin 7 aa c[Mpa-homoArg-Gly-Asp-Trp-
Pro-Cys]- NH2
Millennium
Pharms, GSK,
Schering-Plough
Acute coronary
syndrome, unstable
angina undergoing PCI
2.5 hours
Cyclosporine Neoral, Gengraf,
Sandimmune,
Arpimune Me,
Graftin,
Imusporin,
Panimun Bioral
11 aa (3S,6S,9S,12R,15S,18S,21S,24S,
30S,33S)- 30-Ethyl-33-
[(1R,2R,4E)-1-hydroxy-2-
methyl-4-hexen-1-yl]-
6,9,18,24- tetraisobutyl-3,21-
diisopropyl-
1,4,7,10,12,15,19,25,28-
nonamethyl-
1,4,7,10,13,16,19,22,25,28,31-
undecaazacyclotritriacontane-
2,5,8,11,14,17,20,23,26,29,32-
undecone
RGP life
sciences,
Ranbaxy
laboratories,
Cipla limited,
Ecolity, Allergan,
Novartis
Transplant (kidney,
liver, and heart)
rejection, rheumatoid
psoriasis arthritis,
severe
5–18
hours
Recent Advances In Peptidomimetics
i. Peptides vaccines were developed for the
prevention and treatment of pathogenicity
diseases,cancer and autoimmune disorders but
because of low immunogenicity and reduced
bioavailability they have become unsuccessful
peptidomimetics were developed through
chemical alteration of epitope structure to
overcome this side effects.
ii. A new range of AMPs(antimicrobial peptides)
termed’’Peptidomimetics ‘’were developed to
mimic the bactericidal mechanism.
PEPTIDOMIMETICS [M.PHARM, BSC, MSC, B.PHARM]

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PEPTIDOMIMETICS [M.PHARM, BSC, MSC, B.PHARM]

  • 1.
  • 2. Contents • Introduction • Classification • Advantages and Disadvantages • Method of preparation • Peptidomimetics Drug Design Principle • Chemistry and stereochemistry • Synthesis • Therapeutic value of peptidomimetics
  • 3. Introduction • A small protein – like chain designed to mimic a peptide , have no peptide bonds and MW<700D • Arise either from –  Modification of an existing peptide,  or by designing similar systems that mimics peptides, such as peptoids and β-peptides. • Altered chemical structure is designed to adjust the molecular properties as, stability or biological activity.
  • 4. Defination  Peptidomimetics are chemical structures derived from bioactive peptides which imitate natural molecules.  A peptidomimetics is a small protein – like chain designed to mimic a peptide. They typically arise either from modification of an existing peptide, or by designing similar system that mimic peptides, such as peptoids and β-peptides .
  • 5. Classification Chart No: 1 Class A • Modified peptides: peptides mainly formed by α-amino acids with minor side chain or backbone alterations. Class B • Modified peptides/ foldamers: peptides with various backbone and side chain alteration also including foldamers. Class C • Structural mimetics: small molecules-like scaffolds that project substituents in analogy to peptide side chains. Class D • Mechanistic mimetics: molecules that mimics the mode of action of a peptides without direct link to its side chains.
  • 6. Advantages and Disadvantages  Advantages of Peptidomimetics as Drugs 1. Conformationally restrained structures can minimize binding to non-target receptors and enhance the activity at the desired receptor. 2. Addition of hydrophobic residues and/or replacement of amide bonds results in better transport properties through cellular membranes. 3. Isosteres, retro-inverso peptides, cyclic peptides and non-peptidomimetics all reduce the rate of degradation by peptidases and other enzymes.  Disadvantages of Peptides as Drugs 1. Limited stability towards proteolysis by peptidases in the gastroeintesinal tract and in serum (t1/2 on the order of minutes) 2. Poor transport properties from the intestine to the blood and across the blood-brain barrie due to high MW and lack of specific transport systems 3. Rapid excretion through the liver and/or kidneys 4. Inherent flexibility enables interaction with multiple receptors besides the target, and could result in undesired side-effects
  • 15. Therapeutic Value of Peptidomimetics INNs Brand names Length Sequences Companies Indications Half-life Daptomycin Cubicin 13 aa N-Decanoyl-Trp-Asp-Asp- threonylglycyl-ornithyl-Asp-D- alanyl- aspartylglycyl-D-seryl- threo-3-methyl- glutamyl-3- anthraniloyl-alanine[egr]1- lactone Cubist Pharmaceutical s Antibiotic used to treat systemic and life- threatening infections caused by Gram- positive organisms 8–9 hours Afamelanotid e Scenesse 13 aa Ac-Ser-Tyr-Ser-Nle-Glu-His-D- Phe-Arg- Trp-Gly-Lys-Pro-Val- NH2 Clinuvel Pharmaceutical s Erythropoietic porphyries 100 min Eptifibatide Integrilin 7 aa c[Mpa-homoArg-Gly-Asp-Trp- Pro-Cys]- NH2 Millennium Pharms, GSK, Schering-Plough Acute coronary syndrome, unstable angina undergoing PCI 2.5 hours Cyclosporine Neoral, Gengraf, Sandimmune, Arpimune Me, Graftin, Imusporin, Panimun Bioral 11 aa (3S,6S,9S,12R,15S,18S,21S,24S, 30S,33S)- 30-Ethyl-33- [(1R,2R,4E)-1-hydroxy-2- methyl-4-hexen-1-yl]- 6,9,18,24- tetraisobutyl-3,21- diisopropyl- 1,4,7,10,12,15,19,25,28- nonamethyl- 1,4,7,10,13,16,19,22,25,28,31- undecaazacyclotritriacontane- 2,5,8,11,14,17,20,23,26,29,32- undecone RGP life sciences, Ranbaxy laboratories, Cipla limited, Ecolity, Allergan, Novartis Transplant (kidney, liver, and heart) rejection, rheumatoid psoriasis arthritis, severe 5–18 hours
  • 16. Recent Advances In Peptidomimetics i. Peptides vaccines were developed for the prevention and treatment of pathogenicity diseases,cancer and autoimmune disorders but because of low immunogenicity and reduced bioavailability they have become unsuccessful peptidomimetics were developed through chemical alteration of epitope structure to overcome this side effects. ii. A new range of AMPs(antimicrobial peptides) termed’’Peptidomimetics ‘’were developed to mimic the bactericidal mechanism.