1) The document discusses reaction kinetics including rate laws, reaction orders, elementary reactions, reaction mechanisms, intermediates, and determining the rate constant and reaction order experimentally.
2) A reaction mechanism consists of a series of elementary reaction steps that convert reactants to products, possibly through intermediates.
3) The rate law for the overall reaction depends on the slowest elementary reaction step, known as the rate determining or rate limiting step.
T21 IB Chemistry- Spectroscopy continued Robert Hughes
This document outlines lessons for a spectroscopy course, including:
1. A review of infrared spectroscopy, mass spectroscopy, and proton NMR spectroscopy.
2. Practice using these techniques to answer exam questions and deduce organic compound structures.
3. Details on high resolution proton NMR, including spin-spin coupling and interpreting splitting patterns.
4. Interpreting NMR spectra to determine functional groups and hydrogen environments.
5. A brief overview of X-ray crystallography and some practice questions reviewing all three techniques.
The course aims to build students' skills in applying spectroscopy methods to organic compound analysis through lessons, examples, and practice questions.
Mendeleev created the periodic table by arranging elements in order of atomic mass, leaving gaps for undiscovered elements. Each column of the periodic table contains elements with similar properties because they have the same number of valence electrons. Elements within the same group have similar chemical properties and tend to form ions with the same charge. Metals are generally good conductors of heat and electricity, while nonmetals are brittle and poor conductors.
This document describes an experiment using proton NMR spectroscopy to study the aquation kinetics of trans-dichlorotetraamminecobalt(III) chloride. The reaction involves one chloride ligand being replaced by a water molecule. Kinetic analysis of NMR peak heights and integrals over time indicates the reaction is first-order. Arrhenius and Eyring parameters are determined and used to calculate the rate constant at 25°C, which agrees with literature values. The positive entropy of activation suggests an associative mechanism for this substitution reaction.
The document discusses qualitative analytical chemistry techniques for separating and identifying cations and anions in aqueous solutions. It provides examples of separation schemes based on differences in solubility rules of metal hydroxides and oxides. Confirmatory tests are described to verify the presence of specific cations like Fe3+, Al3+, Pb2+, and Ni2+ after separation. The document also discusses approaches for distinguishing between common anions using chemical reactions.
1. The chapter introduces organic chemistry and the different functional groups that classify organic compounds.
2. It describes IUPAC nomenclature rules for systematically naming organic structures and explains how to identify substituents.
3. The chapter covers different types of isomerism including structural, stereoisomers, and optical isomers that can exist.
1) The document discusses reaction kinetics including rate laws, reaction orders, elementary reactions, reaction mechanisms, intermediates, and determining the rate constant and reaction order experimentally.
2) A reaction mechanism consists of a series of elementary reaction steps that convert reactants to products, possibly through intermediates.
3) The rate law for the overall reaction depends on the slowest elementary reaction step, known as the rate determining or rate limiting step.
T21 IB Chemistry- Spectroscopy continued Robert Hughes
This document outlines lessons for a spectroscopy course, including:
1. A review of infrared spectroscopy, mass spectroscopy, and proton NMR spectroscopy.
2. Practice using these techniques to answer exam questions and deduce organic compound structures.
3. Details on high resolution proton NMR, including spin-spin coupling and interpreting splitting patterns.
4. Interpreting NMR spectra to determine functional groups and hydrogen environments.
5. A brief overview of X-ray crystallography and some practice questions reviewing all three techniques.
The course aims to build students' skills in applying spectroscopy methods to organic compound analysis through lessons, examples, and practice questions.
Mendeleev created the periodic table by arranging elements in order of atomic mass, leaving gaps for undiscovered elements. Each column of the periodic table contains elements with similar properties because they have the same number of valence electrons. Elements within the same group have similar chemical properties and tend to form ions with the same charge. Metals are generally good conductors of heat and electricity, while nonmetals are brittle and poor conductors.
This document describes an experiment using proton NMR spectroscopy to study the aquation kinetics of trans-dichlorotetraamminecobalt(III) chloride. The reaction involves one chloride ligand being replaced by a water molecule. Kinetic analysis of NMR peak heights and integrals over time indicates the reaction is first-order. Arrhenius and Eyring parameters are determined and used to calculate the rate constant at 25°C, which agrees with literature values. The positive entropy of activation suggests an associative mechanism for this substitution reaction.
The document discusses qualitative analytical chemistry techniques for separating and identifying cations and anions in aqueous solutions. It provides examples of separation schemes based on differences in solubility rules of metal hydroxides and oxides. Confirmatory tests are described to verify the presence of specific cations like Fe3+, Al3+, Pb2+, and Ni2+ after separation. The document also discusses approaches for distinguishing between common anions using chemical reactions.
1. The chapter introduces organic chemistry and the different functional groups that classify organic compounds.
2. It describes IUPAC nomenclature rules for systematically naming organic structures and explains how to identify substituents.
3. The chapter covers different types of isomerism including structural, stereoisomers, and optical isomers that can exist.
- Hard and soft acids and bases (HSAB) can be classified based on their polarizability - hard species have tightly held electron clouds while soft species have loosely held, easily polarized electron clouds.
- Hard acids prefer to interact with hard bases that have donor atoms like N, O, F, while soft acids prefer soft bases with donor atoms like P, S, Se, Cl, Br.
- Examples of hard acids are H+, Li+, Na+, K+ and hard bases are OH-, F-. Soft acids include Cu+, Ag+, Au+ and soft bases include S2-, Se2-.
K4 Organic Chemistry Alkanes And Alkenes (Includes Polymers)Sean Hunt
1) The document discusses organic chemistry concepts including alkanes, alkenes, cracking, and polymerization.
2) Alkanes are saturated hydrocarbons with the general formula CnH2n+2, while alkenes are unsaturated and contain carbon-carbon double bonds.
3) Cracking involves breaking down large hydrocarbon molecules into smaller ones like alkenes using heat and a catalyst. Alkenes can then undergo addition polymerization to form plastics like polyethene, polypropene, and PVC.
[ Visit http://www.wewwchemistry.com ] This is a summary presentation of the introductory topics in Organic Chemistry, prepared according to the Singapore-Cambridge GCE A Level 9647 H2 Chemistry syllabus.
Photoelectric Effect and Photochemical Reactions. Photons of Light and Chemical Reactions. photodissociation of O2. It was found that Stopping voltage is proportional to the frequency of the incident light but independent of the light intensity
The document summarizes the evolution of atomic models from Dalton's billiard ball model in 1803 to the modern quantum mechanical model. It traces the key discoveries and models of Thomson, Rutherford, Bohr, Schrodinger that led to the understanding that electrons occupy discrete energy levels and orbitals around the nucleus rather than definite orbits, described by quantum numbers. The modern atomic model uses orbitals and quantum mechanics to describe the probability of finding electrons in an atom.
This document covers topics related to organic chemistry II, including:
- The general formula and nomenclature of carboxylic acids.
- The preparation of acid chlorides from carboxylic acids and their reactivity. Acid chlorides are more reactive than acids due to the chlorine withdrawing electron density.
- Common reactions of acid chlorides including reduction, Friedel-Crafts acylation, and nucleophilic acyl substitution such as hydrolysis, ammonolysis, and alcoholysis.
Bioinorganic chemistry examines the roles of inorganic elements in biological processes. Metal ions can have structural or catalytic roles. The human body contains 11 essential elements that make up 99% of mass, including bulk metals like sodium, magnesium, and calcium. Transition metals like iron, copper, and zinc are also required in small amounts. Metalloenzymes utilize transition metals as catalytic centers, with iron, zinc, and copper appearing in oxygen-binding proteins, hydrolytic enzymes, and redox enzymes. Porphyrin complexes incorporate metals into their centers and are important in molecules like hemoglobin, myoglobin, and chlorophyll.
The document provides information about amines and amides. It discusses the structures and properties of amines, including their classifications and nomenclature. Primary and secondary amines can form intermolecular hydrogen bonds. Amines react as weak bases and form alkylammonium salts with acids. Amides have high boiling points due to hydrogen bonding between molecules. Amides are named as alkanamides and are prepared from amines through reaction with acid anhydrides or chlorides.
This is useful to the chemical analysis persons. Tittration is one of the basic and standard method for quantitative chemical analysis. This describs the principles of titration, function of indicators, calculation of errors etc.
1. Main group elements, also called representative elements, consist of metals, non-metals, and metalloids.
2. These elements are classified into two main categories: alkali metals (groups IA) and alkaline earth metals (group IIA).
3. Alkali metals include lithium, sodium, potassium, rubidium, cesium, and francium and have an ns1 electronic configuration. Alkaline earth metals include beryllium, magnesium, calcium, strontium, barium, and radium and have an ns2 electronic configuration.
This document provides an outline for a lesson on transition metals and complex ions. It includes:
1) A review of trends in the d-block elements from Topic 3.
2) An explanation of what defines a transition metal and their common properties.
3) A discussion of how transition metals can form complex ions with variable oxidation states and an investigation of complex ions.
4) An explanation of why complex ions are often colored due to d-orbital splitting effects.
1. Alkanes, alkenes, alkynes, and aromatics are classes of organic compounds. Nomenclature systems have evolved over time to systematically name organic structures.
2. The IUPAC system involves identifying the parent chain, numbering it to give substituents the lowest numbers, and naming substituents as prefixes to the parent name.
3. Functional groups like alcohols and carboxylic acids are named by identifying the parent chain, replacing the ending with the functional group suffix, and numbering/naming substituents.
This document provides information on acids, bases, and aromaticity. It defines acids and bases according to Arrhenius, Bronsted-Lowry, and Lewis theories. Acids are substances that produce H+ ions or accept electron pairs, while bases produce OH- ions or donate electron pairs. The document discusses factors that determine acid and base strength such as conjugate base stability, bond strength, resonance, induction, and hybridization effects. It also provides examples of acid-base reactions and uses pKa values to predict reaction equilibrium and relative acidities.
IB Chemistry on Voltaic Cell, Standard Electrode Potential and Standard Hydro...Lawrence kok
This document discusses voltaic cells and the potential differences between half-cells. It explains that connecting two half-cells with different electrode potentials through an external circuit and salt bridge allows electrons to flow spontaneously from the negative half-cell to the positive half-cell. Specifically, it gives the example of a Zn/Cu voltaic cell, where the Zn half-cell acts as the anode undergoing oxidation and the Cu half-cell acts as the cathode undergoing reduction. When connected, the potential difference between the half-cells can be measured as 1.10 volts using a high resistance voltmeter.
This document discusses reversible chemical reactions and chemical equilibrium. It defines key terms like activation energy, exothermic and endothermic reactions, and how factors like temperature, concentration, and catalysts affect the rate and direction of reversible reactions. Specifically, it explains that at chemical equilibrium, the rates of the forward and reverse reactions are equal and application of Le Chatelier's principle describes how the system responds to changes to relieve stress.
- Elimination reactions occur by either an E1 or E2 mechanism. E1 is a one-step reaction involving a carbocation intermediate, while E2 is a concerted, single-step reaction.
- The E1 mechanism is favored by good leaving groups, stable carbocations, and weak bases. It is non-stereospecific and does not occur with primary alkyl halides. The E2 mechanism is favored by strong bases and polar aprotic solvents. It is stereospecific and proceeds through an anti-periplanar transition state.
- Key factors that determine the mechanism include the stability of carbocation intermediates, the strength of the leaving group and base, and steric
Basic principles & questions and answers of organic chemistry Bryar Ali Rus
this is some basic principles and question & answers of previous years of organic chemistry with notes on dr.emad manhal's examination , school of pharmacy , university of sulaimani .
1) The document discusses different types of elimination reactions, including E1, E2, and E1cB mechanisms.
2) E1 reactions involve the generation of a carbocation intermediate, while E2 reactions occur in one step without intermediates. E1cB reactions first form a carbanion intermediate before the leaving group departs.
3) The mechanism depends on factors like the substrate, leaving group, solvent, and strength of the base used. Zaitsev's, Hofmann, and Bredt's rules also influence the regiochemistry of double bond formation.
This document discusses common functional groups found in organic compounds. It defines functional groups as atoms or groups of atoms that confer similar chemical properties and reactivity. The document then lists and provides examples of common functional groups including alkanes, alkenes, alkynes, aromatics, haloalkanes, alcohols, ethers, aldehydes, ketones, carboxylic acids, esters, amines, and amides. It emphasizes that functional groups are important for classifying organic compounds, identifying sites of chemical reactions, and naming organic compounds.
Here are the key characteristics of an effective drug:
1. It must be able to interact with and bind to a specific receptor molecule in the body.
2. It must be able to easily access the receptor site (e.g. orally administered, injected).
3. It must have physical and chemical properties that allow it to be delivered to patients through artificial means like pills, capsules, injections, etc.
4. It must produce a desired therapeutic effect by either activating (agonist) or inhibiting (antagonist) the receptor it binds to.
5. The effect it produces must be safe, predictable and beneficial in treating/preventing disease or relieving symptoms.
6.
This document provides an overview of pharmacokinetics and its applications in drug development and clinical practice. It discusses how pharmacokinetics principles can help in designing new drugs with improved efficacy and safety, optimizing formulations, and developing controlled release products. It also describes how pharmacokinetics aids in understanding drug absorption, distribution, metabolism and excretion, which influences drug effects. Key applications include developing dosage regimens, addressing interactions, and conducting bioavailability/bioequivalence studies. Reference texts on biopharmaceutics and pharmacokinetics are also cited.
- Hard and soft acids and bases (HSAB) can be classified based on their polarizability - hard species have tightly held electron clouds while soft species have loosely held, easily polarized electron clouds.
- Hard acids prefer to interact with hard bases that have donor atoms like N, O, F, while soft acids prefer soft bases with donor atoms like P, S, Se, Cl, Br.
- Examples of hard acids are H+, Li+, Na+, K+ and hard bases are OH-, F-. Soft acids include Cu+, Ag+, Au+ and soft bases include S2-, Se2-.
K4 Organic Chemistry Alkanes And Alkenes (Includes Polymers)Sean Hunt
1) The document discusses organic chemistry concepts including alkanes, alkenes, cracking, and polymerization.
2) Alkanes are saturated hydrocarbons with the general formula CnH2n+2, while alkenes are unsaturated and contain carbon-carbon double bonds.
3) Cracking involves breaking down large hydrocarbon molecules into smaller ones like alkenes using heat and a catalyst. Alkenes can then undergo addition polymerization to form plastics like polyethene, polypropene, and PVC.
[ Visit http://www.wewwchemistry.com ] This is a summary presentation of the introductory topics in Organic Chemistry, prepared according to the Singapore-Cambridge GCE A Level 9647 H2 Chemistry syllabus.
Photoelectric Effect and Photochemical Reactions. Photons of Light and Chemical Reactions. photodissociation of O2. It was found that Stopping voltage is proportional to the frequency of the incident light but independent of the light intensity
The document summarizes the evolution of atomic models from Dalton's billiard ball model in 1803 to the modern quantum mechanical model. It traces the key discoveries and models of Thomson, Rutherford, Bohr, Schrodinger that led to the understanding that electrons occupy discrete energy levels and orbitals around the nucleus rather than definite orbits, described by quantum numbers. The modern atomic model uses orbitals and quantum mechanics to describe the probability of finding electrons in an atom.
This document covers topics related to organic chemistry II, including:
- The general formula and nomenclature of carboxylic acids.
- The preparation of acid chlorides from carboxylic acids and their reactivity. Acid chlorides are more reactive than acids due to the chlorine withdrawing electron density.
- Common reactions of acid chlorides including reduction, Friedel-Crafts acylation, and nucleophilic acyl substitution such as hydrolysis, ammonolysis, and alcoholysis.
Bioinorganic chemistry examines the roles of inorganic elements in biological processes. Metal ions can have structural or catalytic roles. The human body contains 11 essential elements that make up 99% of mass, including bulk metals like sodium, magnesium, and calcium. Transition metals like iron, copper, and zinc are also required in small amounts. Metalloenzymes utilize transition metals as catalytic centers, with iron, zinc, and copper appearing in oxygen-binding proteins, hydrolytic enzymes, and redox enzymes. Porphyrin complexes incorporate metals into their centers and are important in molecules like hemoglobin, myoglobin, and chlorophyll.
The document provides information about amines and amides. It discusses the structures and properties of amines, including their classifications and nomenclature. Primary and secondary amines can form intermolecular hydrogen bonds. Amines react as weak bases and form alkylammonium salts with acids. Amides have high boiling points due to hydrogen bonding between molecules. Amides are named as alkanamides and are prepared from amines through reaction with acid anhydrides or chlorides.
This is useful to the chemical analysis persons. Tittration is one of the basic and standard method for quantitative chemical analysis. This describs the principles of titration, function of indicators, calculation of errors etc.
1. Main group elements, also called representative elements, consist of metals, non-metals, and metalloids.
2. These elements are classified into two main categories: alkali metals (groups IA) and alkaline earth metals (group IIA).
3. Alkali metals include lithium, sodium, potassium, rubidium, cesium, and francium and have an ns1 electronic configuration. Alkaline earth metals include beryllium, magnesium, calcium, strontium, barium, and radium and have an ns2 electronic configuration.
This document provides an outline for a lesson on transition metals and complex ions. It includes:
1) A review of trends in the d-block elements from Topic 3.
2) An explanation of what defines a transition metal and their common properties.
3) A discussion of how transition metals can form complex ions with variable oxidation states and an investigation of complex ions.
4) An explanation of why complex ions are often colored due to d-orbital splitting effects.
1. Alkanes, alkenes, alkynes, and aromatics are classes of organic compounds. Nomenclature systems have evolved over time to systematically name organic structures.
2. The IUPAC system involves identifying the parent chain, numbering it to give substituents the lowest numbers, and naming substituents as prefixes to the parent name.
3. Functional groups like alcohols and carboxylic acids are named by identifying the parent chain, replacing the ending with the functional group suffix, and numbering/naming substituents.
This document provides information on acids, bases, and aromaticity. It defines acids and bases according to Arrhenius, Bronsted-Lowry, and Lewis theories. Acids are substances that produce H+ ions or accept electron pairs, while bases produce OH- ions or donate electron pairs. The document discusses factors that determine acid and base strength such as conjugate base stability, bond strength, resonance, induction, and hybridization effects. It also provides examples of acid-base reactions and uses pKa values to predict reaction equilibrium and relative acidities.
IB Chemistry on Voltaic Cell, Standard Electrode Potential and Standard Hydro...Lawrence kok
This document discusses voltaic cells and the potential differences between half-cells. It explains that connecting two half-cells with different electrode potentials through an external circuit and salt bridge allows electrons to flow spontaneously from the negative half-cell to the positive half-cell. Specifically, it gives the example of a Zn/Cu voltaic cell, where the Zn half-cell acts as the anode undergoing oxidation and the Cu half-cell acts as the cathode undergoing reduction. When connected, the potential difference between the half-cells can be measured as 1.10 volts using a high resistance voltmeter.
This document discusses reversible chemical reactions and chemical equilibrium. It defines key terms like activation energy, exothermic and endothermic reactions, and how factors like temperature, concentration, and catalysts affect the rate and direction of reversible reactions. Specifically, it explains that at chemical equilibrium, the rates of the forward and reverse reactions are equal and application of Le Chatelier's principle describes how the system responds to changes to relieve stress.
- Elimination reactions occur by either an E1 or E2 mechanism. E1 is a one-step reaction involving a carbocation intermediate, while E2 is a concerted, single-step reaction.
- The E1 mechanism is favored by good leaving groups, stable carbocations, and weak bases. It is non-stereospecific and does not occur with primary alkyl halides. The E2 mechanism is favored by strong bases and polar aprotic solvents. It is stereospecific and proceeds through an anti-periplanar transition state.
- Key factors that determine the mechanism include the stability of carbocation intermediates, the strength of the leaving group and base, and steric
Basic principles & questions and answers of organic chemistry Bryar Ali Rus
this is some basic principles and question & answers of previous years of organic chemistry with notes on dr.emad manhal's examination , school of pharmacy , university of sulaimani .
1) The document discusses different types of elimination reactions, including E1, E2, and E1cB mechanisms.
2) E1 reactions involve the generation of a carbocation intermediate, while E2 reactions occur in one step without intermediates. E1cB reactions first form a carbanion intermediate before the leaving group departs.
3) The mechanism depends on factors like the substrate, leaving group, solvent, and strength of the base used. Zaitsev's, Hofmann, and Bredt's rules also influence the regiochemistry of double bond formation.
This document discusses common functional groups found in organic compounds. It defines functional groups as atoms or groups of atoms that confer similar chemical properties and reactivity. The document then lists and provides examples of common functional groups including alkanes, alkenes, alkynes, aromatics, haloalkanes, alcohols, ethers, aldehydes, ketones, carboxylic acids, esters, amines, and amides. It emphasizes that functional groups are important for classifying organic compounds, identifying sites of chemical reactions, and naming organic compounds.
Here are the key characteristics of an effective drug:
1. It must be able to interact with and bind to a specific receptor molecule in the body.
2. It must be able to easily access the receptor site (e.g. orally administered, injected).
3. It must have physical and chemical properties that allow it to be delivered to patients through artificial means like pills, capsules, injections, etc.
4. It must produce a desired therapeutic effect by either activating (agonist) or inhibiting (antagonist) the receptor it binds to.
5. The effect it produces must be safe, predictable and beneficial in treating/preventing disease or relieving symptoms.
6.
This document provides an overview of pharmacokinetics and its applications in drug development and clinical practice. It discusses how pharmacokinetics principles can help in designing new drugs with improved efficacy and safety, optimizing formulations, and developing controlled release products. It also describes how pharmacokinetics aids in understanding drug absorption, distribution, metabolism and excretion, which influences drug effects. Key applications include developing dosage regimens, addressing interactions, and conducting bioavailability/bioequivalence studies. Reference texts on biopharmaceutics and pharmacokinetics are also cited.
This document provides an overview of how pharmacokinetics principles can be applied in drug development and clinical practice. It discusses how pharmacokinetics helps in designing new drugs with improved efficacy and safety, optimizing formulations, and regulating drug dosing. Factors like absorption, distribution, metabolism and excretion that influence drug behavior in the body are considered. The effects of lipophilicity and solubility on absorption and ways to modify pharmacokinetic properties like half-life are summarized. References on biopharmaceutics and pharmacokinetics textbooks are also provided.
This document provides an overview of the role of pharmacokinetics in drug development and clinical practice. It discusses how pharmacokinetic principles can help in designing new drug formulations with improved therapeutic effectiveness and safety. Some key applications mentioned include developing controlled release formulations, predicting drug interactions, and designing dosage regimens. The document also summarizes factors like absorption, distribution, metabolism and elimination that determine a drug's pharmacokinetic profile and how pharmacokinetics can guide dosage adjustments based on individual patient factors.
Three case histories are summarized that provide lessons for medicinal chemists:
1) The first case illustrates the importance of understanding whether animal tumors are caused by chemical toxicity or high-dose pharmacology before killing a clinical project.
2) The second case shows the value of licensing first-of-type clinical compounds from smaller companies to improve treatment of major diseases.
3) The last case emphasizes the need to investigate pharmacokinetics, safety and other properties early in optimization to select compounds best for clinical development. Converging structure-activity relationships for multiple properties can identify optimal candidates before clinical trials.
Introduction:
History & Development:
Physicochemical Properties in relation to biological action:
Ionization
Solubility
Partition Coefficient
Hydrogen Bonding:
Protein Binding:
Chelation:
Bioisosterism:
Optical & Geomentrical Isomerism
Drug Metabolism:
Drug Metabolism Principles: Phase I & Phase II
Factors Affecting Drug Metabolism including steriochemical Aspects
The document provides information on various stages of drug discovery. It discusses (1) the introduction to drug discovery and the stages involved, including concept development, pre-clinical and clinical trials; (2) various approaches to lead discovery, such as random screening, targeted screening, drug metabolism studies, and rational drug design; (3) examples of drugs discovered without an initial lead like penicillin and Librium; and (4) target identification and validation which are important for rational drug design. The document presents an overview of the key concepts and processes in drug discovery.
This document provides an overview of the drug discovery process. It discusses both discovery without a lead, like penicillin and Librium, as well as discovery with a lead. Methods of lead discovery discussed include random screening, non-random screening, drug metabolism studies, clinical observations, and rational drug design approaches. The drug discovery process is long, typically taking 12-15 years and costing $600-800 million to bring a new drug to market. Examples like penicillin, Librium, and other drugs are used to illustrate key concepts and approaches in drug discovery.
This document provides an overview of basic pharmacology concepts including:
1) Pharmacology involves the study of drug action and is divided into pharmacodynamics and pharmacokinetics.
2) Drugs are absorbed through biological membranes by passive diffusion or active transport and undergo distribution to tissues, metabolism in the liver and kidneys, and excretion mainly through urine or feces.
3) Common routes of drug administration include oral, parenteral, inhalational, and topical routes which determine the rate and extent of drug absorption and delivery to the systemic circulation.
The document discusses the process of new drug development, which involves drug discovery through approaches like exploring natural sources, rational design, and combinatorial chemistry. Drugs then undergo preclinical testing in animals to evaluate safety and efficacy. If promising, drugs enter clinical trials in four phases with humans to further assess safety, efficacy, dosing, and side effects. Successful drugs are approved by regulatory agencies and undergo post-marketing surveillance to monitor long-term effects. The overall process from discovery to marketing can take over 10 years and cost over $500 million.
The chemistry of MDMA and various other phenethylaminesRyan Hemming
The document provides an overview of phenethylamines, a class of compounds that includes MDMA. It discusses their chemical structure, with substitutions that can alter effects. MDMA was first synthesized in 1912 but its psychoactive properties were unknown. Alexander Shulgin rediscovered phenethylamines in the 1960s and synthesized over 200, documenting effects. Recreational use of most phenethylamines is now illegal. The document outlines their appearance as solids and methods of intake as pills or powders, which are not always pure and can be cut with other substances.
This document discusses various methods for finding a lead compound in drug discovery research. It describes choosing a drug target and identifying bioassays to test compounds. Key methods for finding a lead compound include screening natural products, existing drugs, and synthetic compound libraries. Computer-aided design and serendipity can also yield lead compounds. The goal is to find a compound that shows the desired activity and can be optimized into a potential drug candidate.
This document provides an overview of different classes of antibiotics, including β-lactam antibiotics (penicillins, cephalosporins, carbapenems, monobactams), aminoglycosides, and tetracyclines. It discusses the origin, classification, mechanisms of action, structure-activity relationships, and examples of drugs within each class. In particular, it focuses on the characteristics and development of penicillins and cephalosporins, which are the most widely used β-lactam antibiotics. It also briefly mentions β-lactamase inhibitors that are often used in combination with other antibiotics to enhance their effectiveness.
The document discusses the application of pharmacokinetics in new drug development and designing dosage forms. Pharmacokinetics helps understand how the body affects a drug after administration through absorption, distribution, metabolism and excretion. It is used in drug design, developing dosage regimens, and improving drug therapy. Pharmacokinetics principles can be applied to developing controlled release drugs and increasing bioavailability. Factors like lipophilicity and solubility affect drug absorption, and properties like volume of distribution and clearance impact half-life. Pharmacokinetics also aids in identifying metabolic pathways and drug-metabolizing enzymes. Protein binding influences pharmacokinetic properties and drug effects.
Pharmaceutics is the science of converting drugs into medicine by developing formulations and dosage forms to deliver drugs to patients in a user-friendly way. Biopharmaceutics studies how the physicochemical properties of drugs and formulations relate to their absorption, distribution, metabolism, and excretion (ADME), as well as pharmacological and toxicological effects. Key factors that influence drug absorption include the drug's state, polymorphism, crystal habit, molecular weight, particle size, solubility, and permeability according to the Biopharmaceutical Classification System (BCS). Understanding these factors is important for developing effective drug products.
1. The document is a detailed lesson plan for a 10th grade science class about biomolecules. It outlines the objectives, content, learning resources, procedures, and assignment for the lesson.
2. The lesson involves students identifying elements in biomolecules, explaining the four major biomolecules (carbohydrates, lipids, proteins, nucleic acids) and their examples/functions.
3. Activities include unscrambling words, identifying biomolecules from pictures, analyzing a video on biomolecules, and grouping to discuss each major biomolecule type. The lesson aims to teach students about the structure and importance of biomolecules.
The document provides information about cephalosporins:
1. Cephalosporins were first isolated in 1948 from fungus Cephalosporium acremonium. They have a similar mechanism of action to penicillins in inhibiting bacterial cell wall synthesis.
2. The basic nucleus is 7-aminocephalosporanic acid. Semisynthetic cephalosporins have advantages over natural penicillins like increased acid stability and broader antimicrobial spectrum.
3. Cephalosporins are classified based on generations from first to fourth, with later generations having broader spectra. Their structures are modified from the 7-ACA nucleus.
PH 1.1 DEFINE and DESCRIBE the Principles of Pharmacology and Pharmacotherape...Dr SURENDRA BOUDDH
This document provides definitions and principles related to pharmacology and pharmacotherapeutics. It defines key terms like pharmacology, pharmacotherapeutics, drug, and medicine. It describes the principles of pharmacology as how exogenously administered drugs interact with the living system, which depends on pharmacokinetics of how the body affects the drug and pharmacodynamics of how the drug affects the body. Principles of pharmacotherapeutics include applying pharmacological knowledge together with disease knowledge for diagnosis, prevention and treatment. Factors like age, sex, genetics, and route of administration can modify a drug's effects.
This document outlines lessons for a 3 week organic chemistry topic. It covers fundamentals of organic chemistry, stereoisomerism including cis/trans, E/Z and optical isomers. It also covers organic reaction types like substitution, addition and oxidation/reduction. Specific lessons cover nucleophilic substitution mechanisms SN1 and SN2, addition reactions to alkenes and benzene, and separating optical isomers. Activities include naming organic compounds, drawing 3D isomer structures, and working through reaction mechanisms and practice questions.
The document outlines lessons on electrochemical cells, including revising redox fundamentals, investigating voltaic cells, determining standard electrode potentials using the hydrogen half-cell, predicting spontaneity of reactions using electrode potentials, the fundamentals of electrolytic cells, and electrolysis of aqueous solutions and applications like electroplating. It provides learning objectives, lesson outlines, starter questions, explanations of concepts, examples of calculations, and directions for demonstrations and practice questions for each topic.
The document outlines a 12 lesson plan on acids and bases, covering core concepts like different acid definitions, pH calculations, buffers, salt hydrolysis, and acid-base titration curves and calculations. Lessons involve quizzes, examples, explanations of concepts, and some practical activities like investigating buffer capacity and generating titration curves. The goal is to help students develop an understanding of acids and bases from a foundational to applied level.
This document provides an outline for lessons on the topic of chemical equilibrium. It includes:
1) Four lessons that cover investigating equilibrium reactions, determining equilibrium constants (Kc), using the ICE method to solve equilibrium problems, and the relationship between Gibbs free energy (ΔG) and equilibrium.
2) Details of activities and assessments at various levels for each lesson, including determining Kc values, using ICE to find equilibrium concentrations, defining Gibbs free energy, and relating ΔG to Kc.
3) Examples of ICE questions to work through in class covering determining Kc from concentrations, finding concentrations from Kc, and cases where Kc is very small.
4) A discussion of
This document provides an outline for 8 lessons on chemical kinetics for an IB Chemistry class. It includes objectives, content, and activities for each lesson. Lesson 1 reviews topic 6. Lessons 2-4 cover rate equations, determining rate experimentally, and evaluating reaction mechanisms. Lesson 5 discusses the rate-determining step. Lessons 6-7 focus on the Arrhenius equation and determining activation energy experimentally. Lesson 8 reviews the topic with exam questions. The lessons provide definitions, examples, and practice problems to help students understand reaction rates, orders, rate laws, mechanisms, and the temperature dependence of reaction rates.
This document provides an outline for lessons on the topics of energetics and thermochemistry. It includes lessons on lattice enthalpy determination using Born-Haber cycles and enthalpies of solution. It also covers entropy, Gibbs free energy, and calculating changes in these properties for chemical reactions. Sample practice problems and review questions are provided to help teach these concepts and allow students to check their understanding.
This document provides an outline for a lesson on covalent bonding and molecular structure. It includes 5 lessons: 1) a review of topic 4, 2) more shapes of molecules up to 5-6 electron domains, 3) deciding the best resonance structure using formal charge, 4) a case study of ozone looking at resonance, polarity and formal charge, and 5) hybridization of orbitals in covalent bonding focusing on carbon. Interactive simulations and videos are embedded to illustrate concepts like Lewis structures, molecular shapes, resonance structures, and hybridization. Practice problems are included throughout to check understanding.
Here is my presentation on Atomic structure, HL content. Please note that I have tried to acknowledge any sources used, in particular the Pearson textbook which I find excellent.
This presentation includes basic of PCOS their pathology and treatment and also Ayurveda correlation of PCOS and Ayurvedic line of treatment mentioned in classics.
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How to Manage Your Lost Opportunities in Odoo 17 CRMCeline George
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An import error occurs when a program fails to import a module or library, disrupting its execution. In languages like Python, this issue arises when the specified module cannot be found or accessed, hindering the program's functionality. Resolving import errors is crucial for maintaining smooth software operation and uninterrupted development processes.
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This presentation was provided by Steph Pollock of The American Psychological Association’s Journals Program, and Damita Snow, of The American Society of Civil Engineers (ASCE), for the initial session of NISO's 2024 Training Series "DEIA in the Scholarly Landscape." Session One: 'Setting Expectations: a DEIA Primer,' was held June 6, 2024.
Pollock and Snow "DEIA in the Scholarly Landscape, Session One: Setting Expec...
Option D medicinal chemistry SL
1. Option D- Medicinal Chemistry
SL & HL- R.Hughes 2017
Note: an excellent precursor to studying this topic is to watch the movie- ‘The constant gardener’
2. Topic outline…..
Lesson 1- Our dependency on drugs….
Lesson 2- Bioavailability- How effective is your drug?
Lesson 3- Making Aspirin (P).
Lesson 4- Purifying Aspirin (P).
Lesson 5- Penicillin- The first antibiotic.
Lesson 6- The ‘innocent’ little poppy.
Lesson 7- Ouch! My stomach hurts
Lesson 8- pH and buffering.
Lesson 9- The war against viruses!
Lesson 10- Green Chemistry☺
4. Lesson 1- Our dependency on drugs.
Level 4: State the definitions for the key terms
of medicinal chemistry.
Level 7: Explain why we have such a lengthy
drug development process and the F.D.A.
Level 5/6: Describe the different ways of
administering drugs and give examples.
5. Starter…..
List off as many medicines/drugs that you can
think of….
Do you think all of these do exactly what they
say they do?
How can we apply science and chemistry to
measure monitor the efficacy of the drugs we
prescribe…...
6. Keyterms(note: pre-print for students)
Metabolism: The intricate balance of thousands of different biochemical reactions
occurring simultaneously in the body.
White blood cells: The body’s natural secondary line of defense against invading
pathogenic microbes (bacteria, fungi & viruses).
Medicine: Substance which improves health.
Drug: may positively improve (therapeutic) or negatively affect your health (side
effect).
Placebo: Preparation with no active ingredient. Can ‘trick’ patient into feeling
better.
Tolerance: when repeated doses of a drug result in smaller physiological effects.
Addiction: Patient/user gets withdrawal symptoms when drug is not available.
7. Keyterms
Bioavailability: The fraction of the administered dosage that reaches the
bloodstream.
First pass effect: Drugs which are taken orally have to first pass through the
digestive system where up to 80% of the drug can be altered/metabolised (by
enzymes), before reaching the bloodstream (resulting in very low bioavailability).
Enzymes: biological catalysts which can speed up the metabolism of drugs in the
body.
Dosing regime: How much and how often.
Pharmaceutics: The science of dosage form design.
Rational drug design- The modern approach of finding new drugs by identifying
target molecules (e.g. receptors) in the body and designing molecules(lead
compounds) to bind to it.
8. The drug development process.
Establishment of the
Food and Drug
administration (F.D.A.)
https://www.youtube.co
m/watch?v=fX2Kj14PzD
0
11. Parenteral modes of administration-
which do you think will have the fastest effect?
Pearson pg. 863
12. And so the pharmaceutical
industry was born…..
13. Lesson 2- Bioavailability- How effective is your drug?
Level 4: Recall the 3 factors which influence the bioavailability of a
drug in the body.
Level 7:Explain how the therapeutic window of a drug influences its
development as a marketable drug.
Level 5/6: Justify why the term toxic dose 50% (T.D. 50) is used for the
upper limit of a drug in humans and not lethal dose 50% (L.D. 50)
14. Starter…..
What do you think is the most lethal poison
known to us?
https://www.youtube.com/watch?v=flv0ql218
-A
15. Bioavailability
• The fraction of the administered
dose that reaches the bloodstream.
• 3 factors influencing it:
1. Mode of administration.
2. Solubility.
3. Functional groups present.
16. 2. Solubility of the drug
Morphine
More polar, less soluble in lipid
environment, therefore finds it hard
to pass across cell membrane of
small intestine.
Better to administer intravenously.
Codine
Less polar, more soluble in lipid
environment e.g. passes across cell
membrane of small intestine.
Can be quite effective as an oral
administration.
17. 3. Functional groups present
Recall covering the following functional groups from T10- Organic chemistry. *Functional groups can
influence: solubility, reactivity, charge and intermolecular bonding of a drug molecule.
Note: The IB are
very specific
when it comes to
the names of
these functional
groups, so be
careful!
18. Dosage - How much and how often?
• Calculations of dosage must take
bioavailability into account, as well
as possible side-effects and
potential problems of tolerance and
addiction.
• Other factors to consider include:
age, sex, weight, diet, environment
and interaction with other drugs the
patient is already taking.
• The main problem is keeping the
levels of drug within the
therapeutic window.
20. The larger the therapeutic
window/index, the safer the drug.
(a)Penecillin (b) Warfarin- blood thinning drug used in rat
poison and for peolpe with blood clotting problems.
24. Lesson 3- Making Aspirin.
Level 4: State the word equation for the
synthesis of aspirin.
Level 7: Explain why a strong acid is used
in this synthesis.
Level 5/6: Outline this reaction using structural
formulae.
25. Fast facts about Aspirin….
1. It was the first non-steroidal anti-inflammatory drug (N.S.A.I.D.) produced in the 1800s
by Bayer pharmaceutical.
2. Made by altering salicylic acid from the bark of the willow tree.
3. After the 1st world war, Germany was forced to give up the rights to solely produce
Aspirin, allowing the allied forces to benefit from its profits.
4. It is considered the most widely used drug in the world with over 100billion standard
tablets being produced each year!!$$$
5. Can be described as an analgesic or antipyretic drug as it ease pain by reducing
inflammation and fever. It controls the inflammatory response by inhibiting the release
of prostaglandins (‘pain molecules’).
6. Its structure is given in section 37 of the data book, along with some other drug
molecules.
26. Aim: To synthesise Aspirin.
•See Pearson method for this practical on scidrive.
Note will take full lesson, get started early!
27. Lesson 4- Purifying Aspirin.
Level 4: State what the steps are in the recrystallisation
process.
Level 7:Interpret the IR spectra of salicylic acid and
aspirin and be able to distinguish them from each
other.
Level 5/6: Describe how aspirin can be chemically
modified into a salt to improve its aqueous
solubility.
28. Aim: To purify a sample of Aspirin.
•See Pearson method for this practical on scidrive.
Note will take full lesson, get started early!
29. Lesson 5- Penicillin-The first antibiotic.
Level 4: Identify the beta-lactam ring in
penicillin.
Level 7: Explain why there is such a strain
on the beta-lactam ring in penicillin.
Level 5/6: Discuss the effects of chemically
modifying the side chain of penicillin.
30. Starter- A brief history of penicillin.
1. Fleming- Discovers the action of the mould.
2. Chain& Florey- Discover how to make large amounts of
penicillin.
3. Hodgkin- Deduces the structure of penicillin G from x-ray
crystallography( in databook section 37).
https://www.youtube.com/watch?v=0ZWjzcsTd5M
31. The structure of penicillin
• In section 37 of d.book.
• Made by combining the amino acids
cystine and valine (who's structures you
can see in section 33).
• Key point of focus is the R group which
can vary from one penicillin antibiotic to
the next.
• The presence of the ‘beta-lactam’ ring.
Taken from pg 877 Pearson.
32. A closer look at the β-Lactam ring.
• 4 atoms make up the ring, 3 C and
1 N. (make this ring with molymods)
• 2 of the carbons are sp3 hybridised
(i.e. have 4 single bonds) should have
bond angles of 109.5°.
• The other carbon is sp2 hybridised
and should have a bond angle of
120°.
• However, the ring is strained because
of the 90° angles between these
atoms- try it and see what happens! From pg 877 Pearson
33. How penicillin works….
• Once the beta-lactam ring breaks, the carbonyl
carbon of the amide group acts like a ‘hook’ in
your body and will hook onto the bacterial
enzyme- transpeptidase.
• This prevents the bacterium from building the
cross links it needs to hold its wall together and
so it bursts and dies!
• Cool fact- The polypeptide chains used to build
the cross-links to strengthen bacterial cell walls
contain the amino acid d-alanine. Only its
optical isomer L-alanine is found in humans, so
penicillin selectively targets bacteria and is
generally not toxic to animals!- Lucky!
From pg 877 Pearson
34. Antibiotic resistance and new generation penicillins
• Because of over-prescription of antibiotics
and unfinished courses of them, we are
encouraging the generation of ‘super-
bugs’
• They are resistant because they have the
enzyme penicillinase/beta-lactamase
which opens the beta-lactam ring and
renders it inactive.
• Next generation penicillin molecules are
developed to prevent this enzyme from
binding to it, by modifying the R group.
e.g. (a)- methicillin and (b) oxacillin.
Note: M.R.S.A.= Methicillin Resistant Staphylococcus
Aureus- what do we do now?!!
From pg 878 Pearson.
38. Lesson 6- The ‘innocent’ little poppy.
Level 4: Compare the structures of
morphine, codeine and diamorphine.
Level 7: Explain the increased potency of diamorphine
compared to morphine based on their chemical
structure and solubility.
Level 5/6: Outline the pros and cons of using
opiates as analgesics.
39. Starter- Where do opioids come from?
https://www.youtube.com/watch?v=5xmeH_E
dPRA
40. Print out (in
colour) for
students with
slide 42 on the
back- from pg
881 Pearson.
Note- all 3
structures are
in section 37 of
d.book
41. The blood-brain barrier (B.B.B.)
• The blood is a predominantly aqueous
environment.
• The brain is surrounded by a fatty
membrane/layer known as the blood-
brain barrier (b.b.b.)
• The best narcotics (pain killers acting on
the brain) are therefore not too polar and
not too non-polar, i.e. ‘just right’ for
crossing this barrier.
• Out of the 3 opiates, Heroin is the best at
crossing the b.b.b. (can you see why from
using section 37 of the d.book?)
42. Deriving codeine and diamorphine from morphine
e.g. CH3I
CH3COOH or
*(CH3CO)2O
Note: *(CH3CO)2O is the condensed formula for ethanoic/acetic
anhydride. Can you remember where else we might have used
this reagent in this topic? Can you draw what it would look like?
Makes it less polar
so crosses bbb
faster, but this group
doesn’t allow it to
bind as well to
opioid receptors.
Much less polar and so
crosses bbb fastest.
However, these two
ethanoate groups must
be returned to OH groups
in the brain if the
molecule is to be able to
bind to the opioid
receptors. A ‘pro-drug’
From pg 882
Pearson
43. A short history of opioids….. 8min.
https://www.youtube.com/watch?v=4MIseokX
cxY
46. Lesson 7- Ouch! My stomach hurts
Level 4: State some of the ways that the
pH of the stomach can change.
Level 7: Explain how Proton pump inhibitors and
H2 receptor inhibitors work to control the pH
of the stomach.
Level 5/6: Write balanced equations for the
neutralisation of HCl using antacids.
47. Starter- stomach acid can be a real pain!
https://www.youtube.com/watch?v=TdK0jRFp
WPQ
Q. So do any of you know why we have stomach acid of pH 1-2
in there in the first place?!
48. A closer look at the structures of the stomach.
1. HCl is generated by parietal cells in the
gastric glands in the lining of the stomach.
2. This gives a pH of 1-2.
3. This kills off *MOST bacteria and allows the
digestive enzymes of the stomach to do
their job.
4. Certain factors can increase this production
of HCl:
● Stress/alcohol/taking
aspirin/caffeine/smoking.
49. Preventing the over-production of HCl in the stomach.
1. Blocking stomach acid production.
• Histamine is a hormone which can
increase the release of HCl in the
stomach.
• It achieves this by binding to ‘H2
’
(histamine receptors) in the parietal
cells of the stomach.
• A drug which blocks/antagonises this
hormone-receptor interaction is
Ranitidine (Zantac) see section 37 of
d. book.
Histamine
Ranitidine
50. Preventing over-production of HCl in the stomach.
2. Blocking stomach acid secretion.
• H+ ions are pumped into the stomach from the
parietal cells across the cell membrane through
a gastric proton pump.
• As H+ ions come across, K+ ions are exchanged
to replace the loss of +ive charge.
• Since there is a lot of H+ already inside the
stomach, this process is against the
concentration gradient and so requires energy
through the hydrolysis of A.T.P.
• Drugs which inhibit this pump include
omeprazole (Prilosec) and esomeprazole
(Nexium).
51. Antacid equations to know…
1. Calcium hydroxide + hydrochloric acid-->
2. Magnesium hydroxide + hydrochloric acid-->
3. Aluminium hydroxide + hydrochloric acid-->
4. Sodium hydrogen carbonate + hydrochloric acid
5. Sodium carbonate + hydrochloric acid
Note: All of the bases are weak bases. Why do you think you
can’t use a strong base?
54. Lesson 8- pH and buffering.
Level 4: Define what a buffer is and why
they are necessary in the body.
Level 7: Explain how the blood buffers
against changes in pH due to drug or
food intake.
Level 5/6: Solve buffer problems using the
Henderson- Hasselbalch equation.
56. The pH of your blood can change…
• The pH of your blood MUST rest
around 7.4.
• Certain drugs, foods, lack of exercise,
can affect this pH.
• A pH lower than 7.4 is known as
‘acidosis’ and above it is known as
‘alkalosis.’ This can result in death!
• A buffer system exists in your blood
to keep the pH around 7.4 despite
small amounts of acid or base being
added to it.
57. What is a buffer?
A solution/system which maintains a certain pH by neutralising
the addition of small amounts of a strong acid/base.
e.g. CH3COOH/CH3COO-
e.g. NH3/NH4
+
58. Making buffer systems.
Way 1:
Weak acid+ conjugate base salt (in solid form or *solution).
Or.
Weak base + conjugate acid salt (in solid form or *solution).
59. Making buffer systems
Way 2:
Add a strong base to a weak acid
( ½ neutralisation/1/2 equivalence point/midpoint)
At this point you will have equal amounts of the weak acid and it’s
conjugate base because:
e.g. CH3COOH + NaOH
Similarly, you can make a buffer system by adding just the right amount of a strong acid to a weak base.
60. The Henderson- Hasselbalch equation
• Henderson (American) & Hasselbalch (Danish) were
studying acidosis in the blood.
• Their equation is in section 1 of the d.book☺
• pKa of weak acids you will find in section 21 of d.book.
• *The concentrations of weak acid and conjugate base
may be diluted if two solutions are being mixed.
• You do not have to worry about dilution factor if a solid
salt of the acid is added to ‘supplement’ the
concentration of weak base.
66. Lesson 9- The war against viruses!
Level 4: Draw a labelled diagram of the
structure of a virus Vs. a bacterium.
Level 7: Compare and contrast the structure of
sialic acid to the two anti-flu drugs.
Level 5/6: Outline why viruses like influenza and
H.I.V. are so difficult to treat.
68. Viruses Vs. Bacteria
• Viruses are much smaller than bacteria.
• They are very difficult to classify as living.
• They are ‘parasitic’ in nature in that they need another living cell to thrive.
• They can contain either DNA or RNA.
69. Viral replication.
• In order to find out ways of stopping viruses, we need to
understand the various steps of its replication and
‘reproductive’ process.
Q. Can you suggest any points at which you could attack
the virus?
1. Stop it from binding to the host cell.
2. Prevent DNA/RNA transcription/copying.
3. Prevent release of newly formed viral particles from
infected cell.
70. Drugs against viral infection
Vaccines- prevention against infection.
• E. Jenner (1800s):
https://www.youtube.com/watch?v=jJwGNPRmyTI
• A small amount of the virus ‘attenuated’ is injected into the
patient in order to illicit a mild immune response.
• The immune system generates antibodies against this
pathogenic particle.
• Immune memory is generated which can deal with the full virus
should it meet it in the future.
• In 1980 the W.H.O. declared smallpox to be eradicated from all
parts of the world!
• Vaccine comes from the Latin word ‘vacca’ (for cow☺)
• Often raises controversy amongst people- should we be obliged
to vaccinate ourselves?- take this quick survey to see what WE
think:
• https://docs.google.com/forms/d/11Em_POw1X4KUJNpdZB8se
Cdf6XCCmPrRig0JgQUA_3Y/edit
Anti-viral – Treatment once infected.
• If a virus has overcome the body’s
immune system, it is very hard to stop!
• They have very little, in terms of
structure, to target.
• They mutate rapidly.
• Multiple drugs have to be administered to
effectively keep the virus ‘at bay’
• Average cost of drug cocktail for HIV is
$12,000 per patient /yr (For the rest of
your life……….)
71. Case study 1- The influenza virus.
• Between 2009-2010 250,000 people died from the
(H1N1) strain of the influenza virus (a.k.a. ‘swine flu’).
• At its height it was declared a pandemic (from the word
pandemonium).
• Some people argue that the situation may have been
over-hyped in order to increase sales of the of the flu
vaccine…….
• Do we really need the ‘flu shot?’
https://www.youtube.com/watch?v=GjzM
MqVFDH0
72. Anti- influenza drugs.
• Target either the H spikes (Hemagglutinin) or the N
spikes (Neuraminidase)- hence the classification of flu
viruses using the H,N nomenclature system (e.g. H1N1)
• Hemagglutinin is the protein the virus uses to dock onto
the host cell.
• The neuraminidase protein is an enzyme which the virus
uses to release itself from the host cell once it has
infected that cell:
73. Neuraminidase is the main target for drugs.
The enzyme- substrate complex.
• Neuraminidase is the enzyme.
• Sialic acid is the substrate.
• Q. what key functional groups have
been highlighted in the picture on
the right?
Structure of Sialic acid
From Pearson pg. 897
74. Anti- flu drugs Substrate- sialic acid
From pg 897 Pearson- note, both of these are in section 37 of d. book.
75. Case study 2- The H.I.V. virus.
• First appeared in 1981.
• Acquired Immunodeficiency Syndrome (A.I.D.S.) results from a H.I.V. infection.
• It has had pandemic status since then.
• Like flu, it can be described as a ‘retro-virus’ as its genetic material is initially in RNA format which must be
converted ‘back’ to DNA format in the host cell before it can replicate.
• This is achieved via reverse transcriptase.
Combination therapy:
https://www.youtube.com/watch?v=EYqsgAQ7yNM
Charlie Sheen and combination therapy:
https://www.youtube.com/watch?v=yvmMB4PBxp0
76. Anti- HIV drugs.
• Very difficult to contain- mutates
far more rapidly than flu.
• Destroys helper T-cells.
• Can lie dormant.
• Combination approach.
• Very expensive- sub-Saharan
countries struggle to afford- (see
‘constant gardener’ movie)
WHO on HIV:
https://www.youtube.com/watch?
v=n61IAf07VAQ
78. Lesson 10- Green chemistry.
Level 4: List off the 3 main forms of chemical
waste which threaten our environment.
Level 7: Explain the 12 principles of green
chemistry.
Level 5/6: Describe how green chemistry has
been applied to the production of Tamiflu.
79. Starter- The 12 principles of green chemistry.
Fun video recap☺
https://www.youtube.com/watch?v=_nvXzxglI
T0
*Print out handout on the 12 principles from Pearson for students.
80. 3 Examples of Chemical waste
1. Solvents from pharma industry (and school
lab experiments!)
2. Nuclear waste.
3. Antibiotic waste.
81. 1. Solvents from the pharma
industry.
Pick 2 solvents from each list and then run it through risk assess – see what it says…..
From Pearson pg. 931
82. 2. Nuclear waste.
Low level waste (L.L.W.)
• Radioactive isotopes with short half
lives e.g. I131 in medical imaging.
• Give off small amounts of ionizing
radiation for a short time e.g. 8 days
for I131.
• Contaminated gloves, shoe covers,
paper towels and implements are
stored for these 8 days and then
disposed off as general waste.
High level waste (H.L.W.)
• Radioactive isotopes with long half
lives e.g. U238.
• Give off large amounts of ionizing
radiation for a very long time e.g. 4.5
billion years U238 !
• Store under water for 5-10 years
initially, then put into heavily
shielded containers and stored under
ground.
Check out this video: https://www.youtube.com/watch?v=HQKT4axR6RU
83. 3. Antibiotic waste.
• In the lesson on penicillin, we learned that bacteria have become resistant to it over the many years that
it has been used- ‘antibiotic resistance’
• We then mentioned that the antibiotic methicillin (a derivative of penicillin) was developed.
• However, we now have the issue of ‘super-bug’ such as M.R.S.A. methicillin resistant staph. Aureus,
which is particularly prevalent in hospitals.
• The spread of antibiotic resistant bacteria is primarily the result of overuse/prescription of antibiotics.
• However, there are other things we are doing which don’t help either:
Nice video on resistance: https://www.youtube.com/watch?v=znnp-Ivj2ek
84. Making Tamiflu from The Chinese star plant.
Green chemistry principle # 7- Use of renewable feedstocks.
• Shikimic acid is the precursor to
Tamiflu.
• Tamiflu is the only known drug to
combat the H5N1 (‘avian flu’)
• The ‘waste bit’ comes from the fact
that we can’t synthesise it in the lab
and so need to grow lots of this plant
or alternatives.
• Can be produced from the
fermentation reactions of bacteria-
being researched by Roche pharma.
85. Why should industries bother?
It eventually becomes government policy, so
those who are ahead of the game, will stay
ahead!
https://www.youtube.com/watch?v=rIE4T2HL
W7c