PEER 1 Offers NVIDIA GPU to Accelerate High Performance Applications PEER 1 has teamed up with NVIDIA the creator of the GPU and a world leader in visual computing, to provide high performance GPU Cloud applications. NVIDIA’s GPUs are well known for making customer software run faster and PEER 1 is offering a number of services that run on NVIDA’s GPUs. PEER 1’s cloud service is built on NVIDIA Telsa GPU’s delivering supercomputing performance in the cloud to solve much tougher problems. Click here to find out how PEER 1 and NVIDIA can transform your business.

1. ––
Accelerating High Performance Applications

2. Strategic Focus on Applications
Senior-level relationship and market
managers
Dedicated technical resources
More than 150 people devoted to
libraries, tools, application porting
and market development
Worldwide focus

3. Reaching a Broad Range of Markets
Scientific computing Creative pro Education / research

4. Strategic Partners
CAD/ CAM/ CAE/ EDA Computational Computational Defence & Digital Physical Seismic
CAID chemistry Finance Intelligence Content Sciences processing
creation and
visualization
Autodesk Ansys Amber MATLAB Ikena Adobe Quda (L-QCD) Schlumberger
Dassault Dassault NAMD Mathematica Intergraph Autodesk M&E WRF Landmark
Systemes: Systemes:
CATIA Simulia
Solidworks
PTC Nastran Gromacs NAG ESRI Avid ACUSA Paradigm
Siemens LSTC Lammps Murex Manifold MainConcept HOMME
Synopsys GAMESS Sony HYCOM

5. Leading MD Applications
Features
Application GPU Perf Release Status Notes
Supported
PMEMD : Single and multi-GPUs.
AMBER Explicit & Implicit 8X V11 Released Expect 2x more performance in
Solvent V11 patch release (shortly)
Implicit (5x), Explicit Single GPU released, Next release: 2H2011
GROMACS (2x) Solvent
2x-5x Version 4.5.4 Better Explicit, MPI
Lennard-Jones, Gay-
LAMMPS Berne
6x Released Single and multi-GPU.
Non-bond force
NAMD calculation
2x-7x Released, v2.8 Single and multi-GPU.
GPU Perf compared against Multi-core x86 CPU socket.
GPU Perf benchmarked on GPU supported features
and may be a kernel to kernel perf comparison

6. Additional MD/MM Applications Ramping
Features
Application GPU Perf Release Status Notes
Supported
TBD, 4-29X Single GPU.
Abalone “Simulations” (on 1060 GPU)
Released
Agile Molecule, Inc.
Production bio-molecular
“µ-sec long
Written for use on dynamics (MD) software specially
ACEMD GPUs
trajectories on Released
optimized to run on single and
workstation”
multi-GPUs
Two-body Forces, Link-
V 4.0 Source only Next release: 2H2011
DL_POLY cell Pairs, Ewald SPME 4x Results Published Multi-GPU, multi-node supported
forces, Shake VV
HOOMD- Written for use on 2X Released, Version
Single and multi-GPU.
(32 CPU cores vs.
GPUs 0.9.2
Blue 2 10XX GPUs)
GPU Perf compared against Multi-core x86 CPU socket.
GPU Perf benchmarked on GPU supported features
and may be a kernel to kernel perf comparison

7. Viz and “Docking” Applications
Related Features
GPU Perf Release Status Notes
Applications Supported
Visualization from Visage
3D visualization of
Imaging. Next release, 5.4, will
Amira 5® volumetric data and N/A Released, Version 5.3.3
use GPU for general purpose
surfaces
processing in some functions
Core GPU accelerated Up to
Released, Suite 2011
Single and multi-GPUs.
application 5000X Schrodinger, Inc.
Hopping
Real-time shape
Single and multi-GPUs.
FastROCS similarity 800-3000X Released
Open Eyes Scientific Software
searching/comparison
High quality rendering,
large structures (100 million atoms),
GPU acceleration for
100-125X or Visualization from University of
VMD computationally demanding analysis
and visualization tasks, multiple
GPU support for very fast display of
greater
Released, Version 1.9
Illinois at Urbana-Champaign
molecular orbitals arising in
quantum chemistry calculations
GPU Perf compared against Multi-core x86 CPU socket.
GPU Perf benchmarked on GPU supported features
and may be a kernel to kernel perf comparison

8. Quantum Chemistry
Features GPU
Application Release Status Notes
Supported Perf
Libqc with Rys
Single GPU supported in 10/1/10
Quadrature Algorithm,
release.
GAMESS-US integral evaluation, 2.5X Released
Multi-GPU supported in
closed shell Fock
July 2011 release.
matrix construction
Triples part of Reg-
Development GPGPU
CCSD(T), CCSD & 3-8X Date TBA,
NWChem EOMCCSD task projected in development
benchmarks: www.nwchem-
sw.org
schedulers
Date TBA,
Various features 8-14x
Q-CHEM including RI-MP2 projected
In development Significant porting already
44-650X Single and Multi-GPU.
“Full GPU-based vs. Completely redesigned to exploit
TeraChem solution” GAMESS
Version 1.45 released
massive GPU parallelism
CPU ver.
GPU Perf compared against Multi-core x86 CPU socket.
GPU Perf benchmarked on GPU supported features
and may be a kernel to kernel perf comparison

9. Material Science
Features GPU
Application Release Status Notes
Supported Perf
BigDFT - 50% of the http://inac.cea.fr/L_Sim/BigDFT
Abinit program (short 6-30X Released June 2009 /news.html
convolutions)
Quantum- PWscf package: linear
algebra (matrix
Created by Irish Centre for High-
Espresso/ multiply), explicit TBD Released May 5, 2011
End Computing
computational kernels,
PWscf 3D FFTs
GPU Perf compared against Multi-core x86 CPU socket.
GPU Perf benchmarked on GPU supported features
and may be a kernel to kernel perf comparison

10. Bioinformatics
CUDA-BLASTP HEX Protein Docking
CUDA-EC Jacket (MATLAB Plugin)
CUDA-MEME MUMmerGPU
CUDASW++ (Smith-Waterman) MUMmerGPU++
DNADist SARUMAN
GPU Blast SeqNFind
GPU-HMMER UGENE
Additional details can be found at Tesla Bio Workbench:
http://www.nvidia.com/object/tesla_bio_workbench.html

11. Structural Mechanics
Application GPU Features GPU Perf Release Status Notes
ANSYS Mechanical Linear eqn solvers 2x Total Today, release 13 SP2 FE implicit, single-GPU
Abaqus/Standard Linear eqn solver 2x Total Today, release 6.11 FE implicit, single-GPU
IMPETUS Afea Explicit solver, SPH 10x SPH, 2x Total Today, release 1.0 FE explicit, multi-GPU
LS-DYNA implicit Linear eqn solver 3x Total Planned for 2011 FE implicit, multi-GPU
MD Nastran Linear eqn solvers 2x Solver Planned for 2011 FE implicit, multi-GPU
Marc Linear eqn solver 1.5x Total Planned for 2011 FE implicit, single-GPU
RADIOSS Implicit Linear eqn solver 1.5x Total Demonstration FE implicit, single-GPU
PAM-CRASH implicit Linear eqn solver 1.5x Total Demonstration FE implicit, single-GPU
NX Nastran Linear eqn solver 1.4x Total Demonstration FE implicit, single-GPU
GPU Perf compared against Multi-core x86 CPU socket.
GPU Perf benchmarked on GPU supported features and may be a kernel to kernel perf comparison

12. Fluid Dynamics
Application GPU Features GPU Perf Release Status Notes
Altair AcuSolve Linear eqn solver 2x Total Today, release 1.8 FE unstructured NS, multi-GPU
Autodesk Moldflow Linear eqn solver 2x Total Today, release 2011 FE unstructured NS, single-GPU
FluiDyna LBultra LBM, particle CFD 20x Total Today, release 1.0 Structured LBM, multi-GPU
FluiDyna Culises- Linear eqn solvers 3x Solver Today, release 1.0 Unstructured NS, single-GPU
OpenFOAM Solver
Vratis SpeedIT- Linear eqn solvers 3x Solver Today, release 1.2 Unstructured NS, multi-GPU
OpenFOAM Solver
Prometech MPS, particle CFD 4x-9x Total Q3CY11 release 2.5 Particle based, multi-GPU
Particleworks
Sandia NL S3D Chemistry kernel 8x SP, 5x DP kernel Demonstration Structured grid DNS, multi-GPU
Turbostream Explicit solver 19x Total Today, release 2.0 Structured grid NS, multi-GPU
SD++ (Jameson) Explicit solver 16x Total Planned for 2011 FE unstructured NS, multi-GPU
GPU Perf compared against Multi-core x86 CPU socket.
FEFLO (Lohner) Explicit solver 2x Total Planned for 2011 FE unstructured NS, multi-GPU
GPU Perf benchmarked on GPU supported features and may be a kernel to kernel perf comparison

13. Electromagnetics
Features
Application GPU Perf Release Status Notes
Supported
Single & multi-GPU;
Agilent EMPro FDTD 6X 2011.07 Released
EMPro 2011 PR
Transient (FIT) 9X on 1 GPU
CST Microwave Single & multi-GPU;
solver; Combined MPI to 20X+ on 4 2011 Released
www.cst.com/perf
Studio & GPU computing GPUs
Single and multi-GPU;
Remcom XFdtd FDTD 30-300X XF7 Released
XStream GPU acceleration
FDTD; Single and multi-GPU;
SPEAG SEMCAD X Acceleware
100X 14.4.3 Released
www.speag.com/perf
GPU Performance compared against quad-core x86 CPU socket;
Remcom XFdtd GPU performance compared against single core CPU

14. Climate/ Weather/ Ocean
Application GPU Features GPU Perf Production Status Notes
WSM5, WSM3, Ice
WRF Microphysics models
4x-6x Models Today, release 3.2 single-GPU
ASUCA Most routines 12x Total In production at JMA multi-GPU
NIM Most routines 7x Dynamics Limited production multi-GPU
HIRLAM Dynamical core 3x Solver Planned for 2011 multi-GPU
HOMME Models 3x Models Planned for 2011 single-GPU
CAM Linear eqn solver 2x Solver Planned for 2011 single-GPU
10x Models, 3x
GEOS-5 Most routines
Dynamics
Demonstration multi-GPU
MITgcm Linear eqn solver 3x solver Demonstration single-GPU
HYCOM Linear eqn solver 2x solver Demonstration single-GPU
GPU Perf compared against Multi-core x86 CPU socket.
GPU Perf benchmarked on GPU supported features and may be a kernel to kernel perf comparison