This document discusses in vitro and in vivo models for studying angiogenesis. It describes several in vitro models including cord formation assays, tube formation assays, cell migration assays, cell proliferation assays, and gelatin zymography that are used to study the molecular mechanisms and identify regulators of angiogenesis. Important considerations for developing angiogenesis studies include choosing an appropriate endothelial cell source and extracellular matrix. Several in vivo models are also described such as the rabbit corneal assay, sponge implantation models, matrigel plug assays, and the hind limb ischemia model. Both in vitro and in vivo techniques are important for advancing the understanding and treatment of diseases associated with angiogenesis like cancer.
A new form of cancer treatment using drugs called 'angiogenesis inhibitors' that specifically halt new blood vessel growth and starve a tumor by cutting off its blood supply.
Many healthy foods contain bioactive compounds – specific substances that affect the body in certain ways, such as lowering blood pressure or cholesterol or inhibiting angiogenesis.
angiogenesis, anti angiogenic agents, angiogenic mechanism, types of angiogenesis, wound healing, disorders of angiogenesis, tumour angiogenesis, factors of angiogenesis, theurepeutic angiogenesis, father of tumour angiogenesis, terminology of angiogenesis, angiogenesis in health and disease, diabetic retinopathy, retinopathy of prematurity, macular degeneration, rheumatoid arthritis, arteriogenesis, intussusceptive agiogenesis, angioblasts, angiogenesis inhibitors, william harvey, judah folkman, interferon, thromospondin,sprouting angiogenesis, VEGF,FGF, PDGF, matrix metalloproteinases ,
MULTIFACETED ROLES OF AUTOPHAGY IN CANCER & NEURODEGENERATIVE DISORDERSPHARMA IQ EDUCATION
1. What is Autophagy
2. Overview of the mechanisms lying behind autophagy
3. Mechanism of autophagy
4. Physiological role of autophagy
5. Role of Autophagy in cancer
6. Autophagy in tumor suppression
7. Autophagy in tumor promotion
8. Role of Autophagy in neurodegenerative diseases
9. Mechanism of autophagy in neurodegenerative disorders
10. Conclusion
11. References
12. Thank You
A new form of cancer treatment using drugs called 'angiogenesis inhibitors' that specifically halt new blood vessel growth and starve a tumor by cutting off its blood supply.
Many healthy foods contain bioactive compounds – specific substances that affect the body in certain ways, such as lowering blood pressure or cholesterol or inhibiting angiogenesis.
angiogenesis, anti angiogenic agents, angiogenic mechanism, types of angiogenesis, wound healing, disorders of angiogenesis, tumour angiogenesis, factors of angiogenesis, theurepeutic angiogenesis, father of tumour angiogenesis, terminology of angiogenesis, angiogenesis in health and disease, diabetic retinopathy, retinopathy of prematurity, macular degeneration, rheumatoid arthritis, arteriogenesis, intussusceptive agiogenesis, angioblasts, angiogenesis inhibitors, william harvey, judah folkman, interferon, thromospondin,sprouting angiogenesis, VEGF,FGF, PDGF, matrix metalloproteinases ,
MULTIFACETED ROLES OF AUTOPHAGY IN CANCER & NEURODEGENERATIVE DISORDERSPHARMA IQ EDUCATION
1. What is Autophagy
2. Overview of the mechanisms lying behind autophagy
3. Mechanism of autophagy
4. Physiological role of autophagy
5. Role of Autophagy in cancer
6. Autophagy in tumor suppression
7. Autophagy in tumor promotion
8. Role of Autophagy in neurodegenerative diseases
9. Mechanism of autophagy in neurodegenerative disorders
10. Conclusion
11. References
12. Thank You
These hallmarks constitute an organizing principle for rationalizing the complexities of neoplastic disease. They include sustaining proliferative signaling, evading growth suppressors, resisting cell death, enabling replicative immortality, inducing angiogenesis, and activating invasion and metastasis.
The proteasome is a proteolytic protein that acts as proteolysis in the body and results in the formation of many invaders.
In this ubiquitin-proteasome pathway play a key role in catalysis of protein.
Many targets are available of the proteasome by which proteasome inhibitors act and lead to several processes like apoptosis etc.
It starts with brief introduction about angiogenesis, history of angiogenesis, types and various stages of angiogenesis, followed by its clinical usage.
This presentation naming Role of exosomes in cancer help you find exosomal introduction, composition, functions and their role in cancer growth, metastasis, angiogenesis, cancer diagnosis and therapy
ISEV2014 - Introduction to EV biogenesis and secretion (C. Thery)andyfhill
Slides from ISEV2014 presentation. Introduction to Extracellular Vesicle biogenesis and secretion presented by Clotilde Thery.
For more information go to www.isev.org
These hallmarks constitute an organizing principle for rationalizing the complexities of neoplastic disease. They include sustaining proliferative signaling, evading growth suppressors, resisting cell death, enabling replicative immortality, inducing angiogenesis, and activating invasion and metastasis.
The proteasome is a proteolytic protein that acts as proteolysis in the body and results in the formation of many invaders.
In this ubiquitin-proteasome pathway play a key role in catalysis of protein.
Many targets are available of the proteasome by which proteasome inhibitors act and lead to several processes like apoptosis etc.
It starts with brief introduction about angiogenesis, history of angiogenesis, types and various stages of angiogenesis, followed by its clinical usage.
This presentation naming Role of exosomes in cancer help you find exosomal introduction, composition, functions and their role in cancer growth, metastasis, angiogenesis, cancer diagnosis and therapy
ISEV2014 - Introduction to EV biogenesis and secretion (C. Thery)andyfhill
Slides from ISEV2014 presentation. Introduction to Extracellular Vesicle biogenesis and secretion presented by Clotilde Thery.
For more information go to www.isev.org
IOSR Journal of Pharmacy and Biological Sciences(IOSR-JPBS) is an open access international journal that provides rapid publication (within a month) of articles in all areas of Pharmacy and Biological Science. The journal welcomes publications of high quality papers on theoretical developments and practical applications in Pharmacy and Biological Science. Original research papers, state-of-the-art reviews, and high quality technical notes are invited for publications.
Multiorgan Microdevices for ADME Evaluatio and Drug Design:-
Multi-organ micro-devices are microfluidic devices that gives the information of human metabolism by connecting the fluidic streams from several on-chip in vitro tissue cultures with each other in a physiologically relevant manner. Multi-organ micro-devices can predict tissue-tissue interactions that occur as a result of metabolite travel from one tissue to other tissues in vitro. These systems are capable of simulating human metabolism, including the conversion of a pro-drug to its effective metabolite as well as its subsequent active metabolite and toxic side effects. Since tissue-tissue interactions in the human body can play a significant role in determining the success of new pharmaceuticals, the development and use of multi-organ micro-devices present an opportunity to improve the drug development process. The devices have the potential to predict potential toxic side effects with higher accuracy before a drug enters the expensive and time consuming phase of clinical trials. Further, when operated with human biopsy samples, the devices could be a way for the development of individualized medicine. Since single organ devices are testing platforms for tissues that can later be combined with other tissues within multi-organ devices, we will also mention single organ devices where appropriate in the discussion those seems large area of interest in current research for individualized medicine and drug resistance study.
International Journal of Stem Cell Research and Transplantation (IJST) is an international, Open Access, peer-reviewed journal, which mainly focuses, on the advancements made in the field of cell biology, specifically in the field of Stem Cells.
International Journal of Stem Cell Research and Transplantation (IJST) is a peer-reviewed journal, and is dedicated to providing information with respect to the latest advancements that are being upgraded in our everyday life with respect to the application of Stem cells.
International Journal of Stem Cell Research and Transplantation (IJST) ISSN:2328-3548, is a free, Open Access, Peer-reviewed, exclusive online journal covering areas of Stem cell research, translational work and Clinical studies in the specialty of Stem Cells and Transplantation including allied specialties relevant to the core subject, which is dedicated in publishing high quality manuscripts.
Spleen is an important organ of the reticuloendothelial system. It plays a crucial role in the immunological system of the body. Understanding the consequences and diagnosis of hyposlenic and asplenic states is essential. Splenectomy is performed for a variety of indications ranging from haematological conditions to trauma. Complications of splenectomy include surgical as well as immunological. Overwhelming post splenectomy infection is one of the most dreaded complication with high mortality. The physiological basis of immunological function of the spleen, hyposplenism and complications of splenectomy are presented in this paper.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Comparative structure of adrenal gland in vertebrates
In vitro and in vivo models of angiogenesis
1. In Vitro and in Vivo Models for
Studying Angiogenesis
Vijay Avin BR, Molecular Biomedicine Laboratory, Sahyadri Sceince
College, Shimoga, Karnataka, India
2. Growth of new blood vessels
Advanced cancers can secrete angiogenic
factors (VEGF, bFGF etc).
3.
4.
5. Basic research to elucidate molecular
mechanisms of angiogenesis:
Identify and characterize regulatory pathways that mediate various
steps of angiogenesis such as endothelial cell migration, invasion,
and tubulogenesis.
To develop treatments for cancer and other
diseases associated with angiogenesis:
Identification of compounds that inhibit or stimulate key steps in
the angiogenesis process.
Angiogenesis Research
11. Human Umbilical Vein Endothelial Cells
HUVEC
Most commonly used EC type
for angiogenesis studies
12. ECM provides a physiological substrate that supports key
cellular functions:
• Structural organization of cells and tissue.
• Cell attachment, survival, and proliferation.
• Induction and maintenance of cell differentiation.
• Can influence signal transduction and regulation of
gene expression.
Examples: gelatin, fibronectin, vitronectin, laminin, collagen &
Matrigel
Extracellular Matrix
13. In vitro models for Angiogenesis
Cord Formation Assay
Tube Formation Assay
Cell Migration Assay
Cell Proliferation Assay
Gelatin Zymography
14. Cord Formation Assay
Endothelial cells are incubated in
growth factor containing matrigel
Then they were trypsinized and
resuspended in the same medium
and dispersed onto the matrigel.
Cord formation in each well is
monitored and photographed
using an inverted microscope.
Control
+ Inhibitor
15. The endothelial cells are isolated and cultured in medium in
gelatin coated flasks.
After gelation at 37C for 30 min the gels are overlaid with basal
medium supplemented with test substances at desired
concentrations.
Gels are examined and the tube length is determined for each
well followed by determination of each group by using software.
Tube Formation Assay
17. Cell Proliferation Assay
Control
+ Inhibitor
The proliferation studies are based on
cell counting, thymidine incorporation
(or) Immunohistochemical staining for
proliferation (or) cell death.
Endothelial cells are isolated and
cultured in medium at 37C in a
humidified atmosphere containing 5 %
CO2. Cell proliferation is determined
using a 5-bromo-2'-deoxyuridine (BrdU)
colorimetric assay kit.
18. Gelatin Zymography
MMP
MMP
+
Inhibitor
This assay can also be called as Matrix
Metalloproteinase (MMP) assay.
Gelatin is used as a substrate and is
incorporated into poly acryl amide gels.
Samples are mixed with buffer loaded
onto the gel and electrophoreses.
After electrophoreses the gels are
incubated in activity buffer analyzed by
densitography
20. Rabbit or rat corneal assay
Sponge implantation models
Matrigel plugs
Wound healing assay
In Vivo Models
21. Sponge Implantation Method
This model is used for the evaluation of angiogenesis and
anti- angiogenic agents.
The mechanism involved in this is stimulation of
inflammation by foreign substance leads to the angiogenesis.
22. Sponge implant models
Sterile absorbable gel foam is used as a sponge .
Incision is made at midline of the anaesthetized animal and
gel piece is inserted in to subcutaneously.
At 14th day the animals are sacrificed and gel foams are
harvested and quantification is done for angiogenesis activity.
23. Matrigel plug Assay
Used for the evaluation of both
angiogenic and anti-angiogenic
agents.
The mostly used animal model is
mice.
The mechanism involved in this
model is injection of foreign
substances in to the animal leads to
the stimulation of the inflammatory
cells including macrophages and
neutrophils that leads to the
stimulation of angiogenesis.
Matrigel is a gelatinous material
derived from mouse tumor cells
24. Matrigel plugs
Mice injected with VEGF supplemented Matrigel were left untreated or were
treated with the angiogenesis inhibitor which fully suppresses angiogenesis,
as visible macroscopically and microscopically.
25. Corneal Angiogenesis Assay
A pocket is created in the cornea where
the compound of interest is inserted.
To induce an angiogenic response, a
variety of materials including sponges,
ethylene vinyl copolymer, or Hydron,
containing an angiogenic substance (i.e.
FGF-2 of VEGF) are implanted in
"pockets"
The vascular response can then be
monitored by direct observation using
either a microscope or can be quantified
by computer image analysis after
perfusion of the cornea.
26.
27. Wound Healing Assay
Two circular holes of approximately 5 mm in diameter are
punched with a tissue puncher through the dorsal skin of
an anesthetized mouse.
Wound size, scar formation and re-epithelization of the
wounds should be recorded daily by photography and by
measuring the wound area with calipers.
Treatment can consist of pro-or anti-angiogenic
compounds, and their effects on angiogenesis is
determined post mortem after the regenerated tissue has
been excised, fixed and stained. Transgenic or knock-out
mice can be used, when available, to study the specific
effects of particular genes.
Inflammation, new tissue formation
and remodeling
28. Hind Limb Ischemia Model
This method is mostly used for the evaluation of angiogenesis
substances.
The mechanism involved in this model is haemodynamic changes
leads to the formation of new blood vessels i.e. while large vessels with low
flow tend to augmentation of blood flow which leads to the stimulation of
vascular sprouting and maintain the potency of the newly formed collateral
vessels thereby providing blood flow to the
ischemic tissue
the animals are anaesthetized and incision is making in the skin
overlying the middle portion of the hind limb. Then the proximal end of the
femoral artery is ligating and distal portion of saphenous artery is ligating
and artery and their side branches were dissected free. The femoral artery
and attached side branched are excised and overlying skin is then closed.
30. Fertilized chicken eggs on the second
day of incubation is and incubated at 37C
at constant humidity.
On day 3 small hole is drill at narrow
end and the albumin is withdrawn.
At the 7th day of incubation a small
square window is open in the shell and
test substances are implanted on the top
of the membrane.
The window was sealed and
reincubated. Eggs are incubated up to
appropriate incubation time and
angiogenesis is quantified
31.
32. Xenograft model
On day third window made
and removing 2-3 drops of
albumin
Resealed and kept for
incubation
On day 10 plastic rings
along with cells were placed
and kept for incubation
On day 17th
the eggs were
opened and observed for
the formation of solid
tumor