The Human GenomeFrom Peas and fruit flies to humans…
What is a genome???All the genetic information (genes) that make up an organism
What makes us human?Analyze human chromosome…KarotypePicture of all the chromosomes in an organismAutosomesCHROMOSOMES 1-44 (pairs 1-22)Autosomal chromsomesSex chromosomesDetermine a person’s sex (male XY or female XX)Chromosome 45 and 46 (set 23)
Pedigree ChartsShows relationships within a familyGenetic counselors use these to infer the genotypes of family membersLook at each generation different symbols used
Disorders can be recessive or dominant
Recessive disordersDisorder phenylketonuria (PKU)Caused by an autosomal recessive allele on chromosome 12People with this disorder lack the enzyme to break down phenylalanine (amino acid found in milk and many other foods)In newborns, this causes a build up of phenylalanine in tissues during the first few years of life and lead to mental retardationNewborns are commonly tested for PKU and then put on a low phenylalanine diet if they have the disorder
Autosomal Recessive AlleleTay-Sachs DiseaseRecessive allele in Jewish families of central and eastern Europe ancestryLack the enzyme to break down lipids in neural cellsLipid accumulation in brain cellsLeads to nervous system break-down and death in the first few years of life
Autosomal Recessive DisordersCystic FibrosisDo not have the gene that regulates mucus productionExcess mucus in lungs, digestive tract, and liverIncreased susceptibility to disordersLung transplants usually needed after childhood
Autosomal Dominant DisordersYou will express disorder if you are homozygous or heterozygous dominant for that traitYou also have higher chances of passing onto your childrenDwarfism (achondroplasia)Huntington’s DiseaseNervous system disorder
Co-Dominant Alleles DisordersSickle cell anemia1/500 African Americans have the disorderCo-dominant alleleCauses blockages in blood vessels, preventing oxygen from getting to other cells and tissuesBeneficial in central and east Africa because it helped destroy malariaIf you had SCA, your body would destroy the sickle cells to protect itself and in the process, destroy the malaria parasite as well
Sex-Linked DisordersMany sex-linked genes are found on x-chromosomeMany genetic disorders are sex-linkedMales have just ONE x chromosome, so whatever the X chromosome is carrying (dominant or recessive) will be expressedFathers can pass it to their daughters and the disorder can show up in the daughters sons
Sex-linked DisordersRed-green Color-blindness 1/10 men1/100 womenHemophiliaTwo important genes on x-chr control blood clottingPerson with disorder can die from minor cuts Recessive allele in either gene can cause itDuchenne Muscular DystrophyCaused by defective version of a gene for a muscle proteinProgressive weakening and loss of skeletal muscle1/3000 males
X-chromosome InactivationFemales have XX and males have XY…is the second X chr in females needed??British Geneticist Mary Lyon In female cells, one x-chromosome is randomly shut off…this “shut off” chromosome is called a Barr BodyDifferent X-chrm are switched off in different cellsGenerally not found in males b/c X-chrm needs to be ACTIVEOccurs in other mammals as well
Barr bodies in catsGene that controls color of coat spots is located on the X-chrmIn a female, one X-chrm may have the allele for orange spots and the other X-chrm may have the allele for black spotsDifferent cells in different parts of the cat’s body are switched off= different colored spots on different parts of the cat…mix or orange and black spotsMales only have ONE active X-chrm…therefore, will they have different colored spots?No…only psots of ONE color (b/c on ONE active X)This is one way to determine the sex of a cat…cat with black AND orange spots is almost always certainly female
Chromosomal DisordersMechanics of meiosis (where we separate chromosomes) is usually pretty goodBut nobody’s perfect…mistakes happen….Most common problem…Nondisjunction: when homologous chromosomes fail to separate properlyLiterally means “not coming apart”If this occurs, ABNORMAL #s of chromosomes may find their way into gametes and a disorder of chromosome number may result
NondisjunctionIf one of the gametes with an ABNORMAL # ends up getting fertilized, MAJOR problems!!!Trisomy: “three bodies”Occurs when an autosomal chromosome fails to separate during meiosisWhen do chrm separate?Anaphase I and Anaphase 2One gamete ends up with an extra copy of a chromosome and then the fertilized zygote ends up with 3 copies of a chrm instead of 2Example: Downs Syndrome
Down SyndromeExtra copy of chromosome 211/800 baby’s are born with this disorderProduces mild to severe retardationIncreased susceptibility to diseases, slower development, and higher frequency of birth defectsHow can one little extra copy cause so many problems?Scientists are still trying to figure that out…now that they have used gene mapping and identified all the genes on chromosome 21, they can begin experimenting on this problem
Sex Chromosome DisordersWhat happens if nondisjunction happens to the  sex chromosomes???We know we need at least one X chromosome….No embryos have been found with just a Y chromosome so we now X chrm contains vital genes!Turners SyndromeFemales receive only one X chromosomeKarotype 45, XUnable to reproduce, sex organs do not develop at pubertyKlinefelters SyndromeMales receive an extra X chromosomeKarotype 47, XXYPrevents individuals from reproducingCases of individuals with XXXY and XXXXYY chromosome contains “sex determining region” SDR, which gives male characteristics and developmentIf region is absent, embryo develops into female
Turner’s Syndrome
What about an extra Y?Males with 47, XYY produce more male hormones and express a more expressive behaviorMore testosterone=more aggressive behaviorHigher number of men in prison for violent crimes have XYY however there is a large population of men with XYY that do not exhibit (or at least act upon) this aggressionCannot use this as an excuse for aggressive behavior or else criminals would be pleading an extra Y instead of insanity :-o

Human genetics

  • 1.
    The Human GenomeFromPeas and fruit flies to humans…
  • 3.
    What is agenome???All the genetic information (genes) that make up an organism
  • 4.
    What makes ushuman?Analyze human chromosome…KarotypePicture of all the chromosomes in an organismAutosomesCHROMOSOMES 1-44 (pairs 1-22)Autosomal chromsomesSex chromosomesDetermine a person’s sex (male XY or female XX)Chromosome 45 and 46 (set 23)
  • 6.
    Pedigree ChartsShows relationshipswithin a familyGenetic counselors use these to infer the genotypes of family membersLook at each generation different symbols used
  • 8.
    Disorders can berecessive or dominant
  • 10.
    Recessive disordersDisorder phenylketonuria(PKU)Caused by an autosomal recessive allele on chromosome 12People with this disorder lack the enzyme to break down phenylalanine (amino acid found in milk and many other foods)In newborns, this causes a build up of phenylalanine in tissues during the first few years of life and lead to mental retardationNewborns are commonly tested for PKU and then put on a low phenylalanine diet if they have the disorder
  • 11.
    Autosomal Recessive AlleleTay-SachsDiseaseRecessive allele in Jewish families of central and eastern Europe ancestryLack the enzyme to break down lipids in neural cellsLipid accumulation in brain cellsLeads to nervous system break-down and death in the first few years of life
  • 12.
    Autosomal Recessive DisordersCysticFibrosisDo not have the gene that regulates mucus productionExcess mucus in lungs, digestive tract, and liverIncreased susceptibility to disordersLung transplants usually needed after childhood
  • 13.
    Autosomal Dominant DisordersYouwill express disorder if you are homozygous or heterozygous dominant for that traitYou also have higher chances of passing onto your childrenDwarfism (achondroplasia)Huntington’s DiseaseNervous system disorder
  • 14.
    Co-Dominant Alleles DisordersSicklecell anemia1/500 African Americans have the disorderCo-dominant alleleCauses blockages in blood vessels, preventing oxygen from getting to other cells and tissuesBeneficial in central and east Africa because it helped destroy malariaIf you had SCA, your body would destroy the sickle cells to protect itself and in the process, destroy the malaria parasite as well
  • 16.
    Sex-Linked DisordersMany sex-linkedgenes are found on x-chromosomeMany genetic disorders are sex-linkedMales have just ONE x chromosome, so whatever the X chromosome is carrying (dominant or recessive) will be expressedFathers can pass it to their daughters and the disorder can show up in the daughters sons
  • 17.
    Sex-linked DisordersRed-green Color-blindness1/10 men1/100 womenHemophiliaTwo important genes on x-chr control blood clottingPerson with disorder can die from minor cuts Recessive allele in either gene can cause itDuchenne Muscular DystrophyCaused by defective version of a gene for a muscle proteinProgressive weakening and loss of skeletal muscle1/3000 males
  • 18.
    X-chromosome InactivationFemales haveXX and males have XY…is the second X chr in females needed??British Geneticist Mary Lyon In female cells, one x-chromosome is randomly shut off…this “shut off” chromosome is called a Barr BodyDifferent X-chrm are switched off in different cellsGenerally not found in males b/c X-chrm needs to be ACTIVEOccurs in other mammals as well
  • 19.
    Barr bodies incatsGene that controls color of coat spots is located on the X-chrmIn a female, one X-chrm may have the allele for orange spots and the other X-chrm may have the allele for black spotsDifferent cells in different parts of the cat’s body are switched off= different colored spots on different parts of the cat…mix or orange and black spotsMales only have ONE active X-chrm…therefore, will they have different colored spots?No…only psots of ONE color (b/c on ONE active X)This is one way to determine the sex of a cat…cat with black AND orange spots is almost always certainly female
  • 21.
    Chromosomal DisordersMechanics ofmeiosis (where we separate chromosomes) is usually pretty goodBut nobody’s perfect…mistakes happen….Most common problem…Nondisjunction: when homologous chromosomes fail to separate properlyLiterally means “not coming apart”If this occurs, ABNORMAL #s of chromosomes may find their way into gametes and a disorder of chromosome number may result
  • 22.
    NondisjunctionIf one ofthe gametes with an ABNORMAL # ends up getting fertilized, MAJOR problems!!!Trisomy: “three bodies”Occurs when an autosomal chromosome fails to separate during meiosisWhen do chrm separate?Anaphase I and Anaphase 2One gamete ends up with an extra copy of a chromosome and then the fertilized zygote ends up with 3 copies of a chrm instead of 2Example: Downs Syndrome
  • 25.
    Down SyndromeExtra copyof chromosome 211/800 baby’s are born with this disorderProduces mild to severe retardationIncreased susceptibility to diseases, slower development, and higher frequency of birth defectsHow can one little extra copy cause so many problems?Scientists are still trying to figure that out…now that they have used gene mapping and identified all the genes on chromosome 21, they can begin experimenting on this problem
  • 26.
    Sex Chromosome DisordersWhathappens if nondisjunction happens to the sex chromosomes???We know we need at least one X chromosome….No embryos have been found with just a Y chromosome so we now X chrm contains vital genes!Turners SyndromeFemales receive only one X chromosomeKarotype 45, XUnable to reproduce, sex organs do not develop at pubertyKlinefelters SyndromeMales receive an extra X chromosomeKarotype 47, XXYPrevents individuals from reproducingCases of individuals with XXXY and XXXXYY chromosome contains “sex determining region” SDR, which gives male characteristics and developmentIf region is absent, embryo develops into female
  • 27.
  • 29.
    What about anextra Y?Males with 47, XYY produce more male hormones and express a more expressive behaviorMore testosterone=more aggressive behaviorHigher number of men in prison for violent crimes have XYY however there is a large population of men with XYY that do not exhibit (or at least act upon) this aggressionCannot use this as an excuse for aggressive behavior or else criminals would be pleading an extra Y instead of insanity :-o