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HIGH AND LOW COPY NUMBER
PLASMIDS.
PRESENTEDBY
SHABNOORSHAIKH
M.SCPART 1
1203
JOSHUA LEDERBERG
The termplasmidwas first introducedby the American
molecular biologist Joshua Lederberg in 1952.
He was knownfor his workin genetics, artificial
intelligence and space exploration.
He was just 33 years old whenhe won the1958 Nobel
prize that bacteria can mate and exchange genes.
He sharedthe prize withEdward L. Tatumand
George Beadle who won for their work with genetics.
WHAT IS A PLASMID?
Like other organisms, bacteriauses its double stranded DNA as their genetic material.
Thesegenetic material exist naturally in the cytoplasmof thebacterial cells.
In addition to the nucleoidchromosome, bacterial cell often containplasmid as extra
chromosomal hereditarydeterminant.
 A plasmid is a DNA molecule that is separatefrom, and can replicate independently
of, the chromosomal DNA.
They are double strandedand, in many cases, circular.
Plasmids usually occur naturallyin bacteria, but are sometimes foundin eukaryotic
organisms (e.g., the 2- micrometre-ring in Saccharomycescerevisiae).
They are small (a few thousand base pairs) usually carry few genes.
PlasmidDNA in bacteriummay be 0.1 – 5%of total DNA.
GENERAL COMPONENTS OF PLASMID
Origin of replication:-50-100 bp seq where replicationis initiated.
Selectable marker:- antibioticresistant gene.
Multiple cloning site:- seq that
can be cleavedby restriction enzymes
for cloning purposes.
Repressor gene:- for regulationof copies.
PLASMIDCOPY NUMBER
Copy number is a parameter of bacterialpopulation.
Generallydefinedas theratio of number of moles of plasmidDNA to the number of
mole of chromosomal DNA in the cell.
It varies in rapidly growing bacterial culture.
Copy number is controlledby genes on the plasmidand by interactions between the
host and the plasmid.
It is primarily determinedby the replicon.
CLASSIFICATION OF PLASMIDS.
Plasmids may be classified on the basis of the number of copies foundin the
host cell.
Low copynumber- stringent copy number.
Moderate copy number.
High copy number- relaxedcopynumber.
STRINGENT PLASMIDS
Theseplasmids exists in small numbers
that is 1-4copies per cell.
Its replicationis closely tiedto host cell
chromosomal DNA replication.
Here plasmidDNA replicates only onceor
twice before cell division
Usually large plasmids havelow copy number.
RELAXEDPLASMIDS.
Theseplasmids existsin large numbers that
is more than100 copies per cell.
Its replicationis not dependent on host
cell’s chromosomal DNA replication.
Here plasmidDNA replicates repeatedlyuntil
the proper number is reached.
Usually small plasmids havehigh copynumber.
They are used for expressionof clonedgene
toget higher yields.
EXAMPLES OF PLASMIDS WITHTHEIR COPY NUMBER.
PLASMID APPROXCOPY NUMBER
F 1
P1 prophage 1
RK2 4-7
pBR322 16
pUC18 30-50
plj101 40-300
ADVANTAGES AND DISADVANTAGES.
 ADVANTAGES:-
Readilyisolated fromcells.
Can be reintroduced intoa bacterial cell.
Single restriction site for 1 or more res enzymes.
Multiple copynumber so that amplification of the plasmid DNAbecomes easy.
 DISADVANTAGES:-
Small size hence cannot acceptlarge fragments.
Largerthe size lower its replication rate.
REFERENCES
GENE BIOTECHNOLOGY by S.N. JOGDAND.
PLANTBIOTECHNOLOGYby B.D. SINGH.
 http://www.molecular-plant-biotechnology.info/bacterial-vectors/classification-of-
plasmids
High and low copy number of plasmids

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High and low copy number of plasmids

  • 1. HIGH AND LOW COPY NUMBER PLASMIDS. PRESENTEDBY SHABNOORSHAIKH M.SCPART 1 1203
  • 2. JOSHUA LEDERBERG The termplasmidwas first introducedby the American molecular biologist Joshua Lederberg in 1952. He was knownfor his workin genetics, artificial intelligence and space exploration. He was just 33 years old whenhe won the1958 Nobel prize that bacteria can mate and exchange genes. He sharedthe prize withEdward L. Tatumand George Beadle who won for their work with genetics.
  • 3. WHAT IS A PLASMID? Like other organisms, bacteriauses its double stranded DNA as their genetic material. Thesegenetic material exist naturally in the cytoplasmof thebacterial cells. In addition to the nucleoidchromosome, bacterial cell often containplasmid as extra chromosomal hereditarydeterminant.
  • 4.  A plasmid is a DNA molecule that is separatefrom, and can replicate independently of, the chromosomal DNA. They are double strandedand, in many cases, circular. Plasmids usually occur naturallyin bacteria, but are sometimes foundin eukaryotic organisms (e.g., the 2- micrometre-ring in Saccharomycescerevisiae). They are small (a few thousand base pairs) usually carry few genes. PlasmidDNA in bacteriummay be 0.1 – 5%of total DNA.
  • 5. GENERAL COMPONENTS OF PLASMID Origin of replication:-50-100 bp seq where replicationis initiated. Selectable marker:- antibioticresistant gene. Multiple cloning site:- seq that can be cleavedby restriction enzymes for cloning purposes. Repressor gene:- for regulationof copies.
  • 6. PLASMIDCOPY NUMBER Copy number is a parameter of bacterialpopulation. Generallydefinedas theratio of number of moles of plasmidDNA to the number of mole of chromosomal DNA in the cell. It varies in rapidly growing bacterial culture. Copy number is controlledby genes on the plasmidand by interactions between the host and the plasmid. It is primarily determinedby the replicon.
  • 7. CLASSIFICATION OF PLASMIDS. Plasmids may be classified on the basis of the number of copies foundin the host cell. Low copynumber- stringent copy number. Moderate copy number. High copy number- relaxedcopynumber.
  • 8. STRINGENT PLASMIDS Theseplasmids exists in small numbers that is 1-4copies per cell. Its replicationis closely tiedto host cell chromosomal DNA replication. Here plasmidDNA replicates only onceor twice before cell division Usually large plasmids havelow copy number.
  • 9. RELAXEDPLASMIDS. Theseplasmids existsin large numbers that is more than100 copies per cell. Its replicationis not dependent on host cell’s chromosomal DNA replication. Here plasmidDNA replicates repeatedlyuntil the proper number is reached. Usually small plasmids havehigh copynumber. They are used for expressionof clonedgene toget higher yields.
  • 10. EXAMPLES OF PLASMIDS WITHTHEIR COPY NUMBER. PLASMID APPROXCOPY NUMBER F 1 P1 prophage 1 RK2 4-7 pBR322 16 pUC18 30-50 plj101 40-300
  • 11. ADVANTAGES AND DISADVANTAGES.  ADVANTAGES:- Readilyisolated fromcells. Can be reintroduced intoa bacterial cell. Single restriction site for 1 or more res enzymes. Multiple copynumber so that amplification of the plasmid DNAbecomes easy.  DISADVANTAGES:- Small size hence cannot acceptlarge fragments. Largerthe size lower its replication rate.
  • 12. REFERENCES GENE BIOTECHNOLOGY by S.N. JOGDAND. PLANTBIOTECHNOLOGYby B.D. SINGH.  http://www.molecular-plant-biotechnology.info/bacterial-vectors/classification-of- plasmids