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ILRI’s Livestock Genetics Program - LiveGene
Visit to CSIRO, Brisbane, 20 February 2018
Karen Marshall, ILRI
ILRI’s mission
ILRI’s mission is to improve food and
nutritional security and to reduce
poverty in developing countries
through research for efficient, safe
and sustainable use of livestock—
ensuring better lives through
livestock
ILRI is part of the CGIAR consortium
(15 centres)
ILRI: Established 1994, currently 700+ staff
Two main campuses (Kenya, Ethiopia), 16 additional offices
ILRI’s Livestock Genetics program
Delivering improved genetics to the world’s
small-scale livestock keepers
Working with partners
LiveGene Objectives
 Determine the most appropriate genetic improvement
strategies for different livestock production systems.
 Design and support implementation of sound breeding
programs and delivery of the desired genetics
 Discover the genes responsible for better productivity and
resilience and use this information in breeding programs
 Support the development of policies and institutional
arrangements that would enable improved access to, and
sustainable use of, livestock genetic resources.
Main species we work on
Goat - Africa
Sheep – Africa
Pig – Africa, Asia
Poultry - Africa
Dairy cattle –
Africa, Asia
Dual purpose cattle –
Africa, Latin America
Main focal livestock systems
Buffalo – Asia
Project highlight – Centre for Tropical
Livestock Genetics and Health
Partnership between ILRI, SRUC and Roslin Institute
of the UoE, aimed at supporting programs on
tropical livestock (via genomics / genetics)
Five programs:
 Dairy Genomics
 Chicken Genomics
 Health Genomics
 Reproduction
 Bioinformatics
New Initiative - CTLGH
Project highlight “Senegal Dairy Genetics”
Dairy production in Senegal
 Senegal dairy production cannot meet
domestic demand – high volumes are
imported
 The Senegalese government is actively
supporting increased local dairy production
- including through the use of genetically
improved animals
 However no evidence-base on the most
appropriate type of dairy animal / dairy
system
Background
Imports relative to
domestic production, 2004
Indigenous Zebu cattle under
traditional management
Cross-breed (Zebu by Bos Taurus) under
improved management –
supplementary feed and shade
provision
Type of dairy systems
Trade-off analysis considering
aspects of:
Breed preferences
Productivity
Profitability
Environmental sustainability
Food quality
Food safety
Equality
Partnered with 220 dairy
keeping households, with
3000+ cattle, over an almost 2
year period to obtain data
Dairy systems (n=7) defined by
breed kept & management level
Methodology
Breed composition determined
using a genomic approach
Collecting data
Collecting data
0
200
400
600
800
1000
1200
1400
1600
0
100,000
200,000
300,000
400,000
500,000
600,000
Indigenous
Zebu
Indigenous
Zebu
Indigenous
Zebu by
Guzerat
Indigenous
Zebu by
Guzerat
Indigenous
Zebu by Bos
Taurus
Indigenous
Zebu by Bos
Taurus
High Bos
Taurus
* ** * ** ** *** ****
Household profit (CFA per cow per annum) Milk yield (liters per annum)
Breed
Management
level
8.0 x household profit
7.5 x milk production
2.4 x household profit
3.2 x milk production
Milk yield and profitability
0
100
200
300
400
500
600
0
50
100
150
200
250
300
350
400
+ ++ + ++ ++ +++ ++++
IZ IZ IZ x GZ IZ x GZ IZ x BT IZ x BT BT
Proteinproduction(kgprotein/herd/year)
GHGemissionsintenisity(kgCO2eq/kgprotein)
Breed group and level of management
Manure CH4
Manure N2O
Feed CO2
Feed N2O
Enteric CH4
Protein yield kg/herd/year
Environmental sustainability:
GHG emissions intensity of protein
0
50
100
150
200
250
300
Aflatoxinlevel(ppb)
Purchased
concentrate
Groundnut
hay
Wheat
bran
Millet
bran
Rice
bran
Groundnut
cake
WHO limit is 5 ppb
Improved management associated with increased use of supplementary
feeds (e.g. up to 10 fold higher use for purchased concentrates) 
associated with milk safety risk (as aflatoxins are passed into milk)
Food safety - aflatoxins
Level of
market
orientation
Control of income from the
sale of milk
%
Women
%
Men
%
Joint
Low 72% 27% 1%
Medium 45% 50% 5%
Control of income from the sale of milk can shift from women to men
as the level of market orientation increases
Equality – gendered impacts
Breed
Management level (*)
Zebu
*
Zebu
**
Zebu x
Guzerat
*
Zebu x
Guzerat
**
Zebu x
Bos
Taurus
**
Zebu x
Bos
Taurus
***
High
Bos
Taurus
****
Breed preference –
male / female famers
+/+ +/+ +/+ +/+ +++/+++ +++/+++ ++/+
Production -
liters milk / annum
175 568 223 640 508 1,315 1,422
Profitability -
CFA / annum/cow
60,235 142,041 65,384 186,670 236,028 479,525 407,441
Environmental sustainability
-GHG EI, kg CO2eq/kg protein
338 190 307 165 188 110 108
Food quality -
milk protein/fat
For milk protein – no difference between breed-types
For milk fat – variation between breed-types, but changing trend on parity
Food safety -
aflatoxin levels in feed
Low Medium Low Medium Medium High
Very
high
Equality -
gendered impacts
Women control income from milk sale in a
majority of households
Women control income from
milk sale in fewer households
Still building on additional aspects of this as resources become available
Trade-off summary
Adoption issues:
Investment cost
Access to cross-bred
semen
Farmer capacity
This system is:
Productive
Profitable
Need to address:
Animal feed supply –
sufficient, safe
Potential negative
impacts on women &
children
Dairy cattle systems comprising cross-bred
animals (Indigenous Zebu by Bos Taurus)
kept under good management
Evidence base currently being shared with stakeholders for more informed
decision making …. Planned phase 2 project on intervention implementation
Recommendations
This presentation is licensed for use under the Creative Commons Attribution 4.0 International Licence.
better lives through livestock
ilri.org
ILRI thanks all donors and organizations which globally support its work through their contributions to
the CGIAR system

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ILRI’s Livestock Genetics Program—LiveGene

  • 1. ILRI’s Livestock Genetics Program - LiveGene Visit to CSIRO, Brisbane, 20 February 2018 Karen Marshall, ILRI
  • 2. ILRI’s mission ILRI’s mission is to improve food and nutritional security and to reduce poverty in developing countries through research for efficient, safe and sustainable use of livestock— ensuring better lives through livestock ILRI is part of the CGIAR consortium (15 centres)
  • 3. ILRI: Established 1994, currently 700+ staff Two main campuses (Kenya, Ethiopia), 16 additional offices
  • 4. ILRI’s Livestock Genetics program Delivering improved genetics to the world’s small-scale livestock keepers Working with partners
  • 5. LiveGene Objectives  Determine the most appropriate genetic improvement strategies for different livestock production systems.  Design and support implementation of sound breeding programs and delivery of the desired genetics  Discover the genes responsible for better productivity and resilience and use this information in breeding programs  Support the development of policies and institutional arrangements that would enable improved access to, and sustainable use of, livestock genetic resources.
  • 6. Main species we work on Goat - Africa Sheep – Africa Pig – Africa, Asia Poultry - Africa Dairy cattle – Africa, Asia Dual purpose cattle – Africa, Latin America Main focal livestock systems Buffalo – Asia
  • 7. Project highlight – Centre for Tropical Livestock Genetics and Health Partnership between ILRI, SRUC and Roslin Institute of the UoE, aimed at supporting programs on tropical livestock (via genomics / genetics) Five programs:  Dairy Genomics  Chicken Genomics  Health Genomics  Reproduction  Bioinformatics New Initiative - CTLGH
  • 8. Project highlight “Senegal Dairy Genetics”
  • 9. Dairy production in Senegal  Senegal dairy production cannot meet domestic demand – high volumes are imported  The Senegalese government is actively supporting increased local dairy production - including through the use of genetically improved animals  However no evidence-base on the most appropriate type of dairy animal / dairy system Background Imports relative to domestic production, 2004
  • 10. Indigenous Zebu cattle under traditional management Cross-breed (Zebu by Bos Taurus) under improved management – supplementary feed and shade provision Type of dairy systems
  • 11. Trade-off analysis considering aspects of: Breed preferences Productivity Profitability Environmental sustainability Food quality Food safety Equality Partnered with 220 dairy keeping households, with 3000+ cattle, over an almost 2 year period to obtain data Dairy systems (n=7) defined by breed kept & management level Methodology Breed composition determined using a genomic approach
  • 14. 0 200 400 600 800 1000 1200 1400 1600 0 100,000 200,000 300,000 400,000 500,000 600,000 Indigenous Zebu Indigenous Zebu Indigenous Zebu by Guzerat Indigenous Zebu by Guzerat Indigenous Zebu by Bos Taurus Indigenous Zebu by Bos Taurus High Bos Taurus * ** * ** ** *** **** Household profit (CFA per cow per annum) Milk yield (liters per annum) Breed Management level 8.0 x household profit 7.5 x milk production 2.4 x household profit 3.2 x milk production Milk yield and profitability
  • 15. 0 100 200 300 400 500 600 0 50 100 150 200 250 300 350 400 + ++ + ++ ++ +++ ++++ IZ IZ IZ x GZ IZ x GZ IZ x BT IZ x BT BT Proteinproduction(kgprotein/herd/year) GHGemissionsintenisity(kgCO2eq/kgprotein) Breed group and level of management Manure CH4 Manure N2O Feed CO2 Feed N2O Enteric CH4 Protein yield kg/herd/year Environmental sustainability: GHG emissions intensity of protein
  • 16. 0 50 100 150 200 250 300 Aflatoxinlevel(ppb) Purchased concentrate Groundnut hay Wheat bran Millet bran Rice bran Groundnut cake WHO limit is 5 ppb Improved management associated with increased use of supplementary feeds (e.g. up to 10 fold higher use for purchased concentrates)  associated with milk safety risk (as aflatoxins are passed into milk) Food safety - aflatoxins
  • 17. Level of market orientation Control of income from the sale of milk % Women % Men % Joint Low 72% 27% 1% Medium 45% 50% 5% Control of income from the sale of milk can shift from women to men as the level of market orientation increases Equality – gendered impacts
  • 18. Breed Management level (*) Zebu * Zebu ** Zebu x Guzerat * Zebu x Guzerat ** Zebu x Bos Taurus ** Zebu x Bos Taurus *** High Bos Taurus **** Breed preference – male / female famers +/+ +/+ +/+ +/+ +++/+++ +++/+++ ++/+ Production - liters milk / annum 175 568 223 640 508 1,315 1,422 Profitability - CFA / annum/cow 60,235 142,041 65,384 186,670 236,028 479,525 407,441 Environmental sustainability -GHG EI, kg CO2eq/kg protein 338 190 307 165 188 110 108 Food quality - milk protein/fat For milk protein – no difference between breed-types For milk fat – variation between breed-types, but changing trend on parity Food safety - aflatoxin levels in feed Low Medium Low Medium Medium High Very high Equality - gendered impacts Women control income from milk sale in a majority of households Women control income from milk sale in fewer households Still building on additional aspects of this as resources become available Trade-off summary
  • 19. Adoption issues: Investment cost Access to cross-bred semen Farmer capacity This system is: Productive Profitable Need to address: Animal feed supply – sufficient, safe Potential negative impacts on women & children Dairy cattle systems comprising cross-bred animals (Indigenous Zebu by Bos Taurus) kept under good management Evidence base currently being shared with stakeholders for more informed decision making …. Planned phase 2 project on intervention implementation Recommendations
  • 20. This presentation is licensed for use under the Creative Commons Attribution 4.0 International Licence. better lives through livestock ilri.org ILRI thanks all donors and organizations which globally support its work through their contributions to the CGIAR system

Editor's Notes

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