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Animal Genomics and Biotechnology Education
Were Those the Days?
Animal Ag Then & Now
Alison Van Eenennaam, Ph.D.
Cooperative Extension Specialist
Animal Biotechnology and Genomics
Department of Animal Science
University of California, Davis, USA
Email: alvaneenennaam@ucdavis.edu
Twitter: @BioBeef Blog: http://biobeef.faculty.ucdavis.edu
http://animalscience.ucdavis.edu/animalbiotech
IowaPorkCongress 1/23/2019
http://blogs.egu.eu/network/palaeoblog/files/2012/10/science.jpg
Animal breeders have made remarkable
genetic modifications based solely on
conventional breeding methods
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
Plant and animal breeders have
perhaps the most compelling
sustainability story of all time
https://grist.files.wordpress.com/2015/12/corn-hybrid-yields.jpeg
Chart from Matt DiLeo/USDA
About half of this 369% increase in
production efficiency is attributable to
genetic improvement enabled by AI
VandeHaar, M.J. and St-Pierre, N. (2006). Major Advances in Nutrition: Relevance to the Sustainability
of the Dairy Industry. Journal of Dairy Science 89, 1280-1291.
A
I
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
“In the initial stages of attempting to develop AI
there were several obstacles. The general public
was against research that had anything to do
with sex. Associated with this was the fear that
AI would lead to abnormalities. Finally, it was
difficult to secure funds to support research
because influential cattle breeders opposed AI,
believing that this would destroy their bull
market.”
Artificial insemination was initially
a controversial technology
Foote, R.H. 2002. The history of artificial insemination: Selected notes and notables.
J. Anim. Sci., 80 (E. Suppl.) (2002), pp. E22–E32
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Name the technological innovation
“It is unknown what long term health
consequences may unfold. The studies
are not adequate. Furthermore, this will
likely not be available or cost effective
for small farmers, it will decrease
product acceptance and consumption.”
Quote from the introduction of the
Pasteurized Milk Ordinance
1924
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Name the technological innovation
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Capper, JL and DE Bauman, 2013. The Role of Productivity in Improving the Environmental Sustainability of
Ruminant Production Systems. Annual Review of Animal Biosciences. 1 pp. 9.1–9.21
⅓
Rate of genetic gain in marketed
Holstein bulls has doubled since
2009 genomic selection introduction
http://www.farms.com/news/two-million-genotypes-in-u-s-dairy-database-125448.aspx
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
GENOMICS
The 8-week old body weight of broiler (meat) chickens
has increased from 0.81 kg to 3.14 kg over the period
1957 to 2001, and approximately 80% of this four-fold
increase has been the result of genetic selection.
Havenstein, G., et al. (2003). Growth, livability, and feed conversion of 1957 versus 2001 broilers when fed
representative 1957 and 2001 broiler diets. Poultry Science 82, 1500-1508.
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Animal Biotechnology and Genomics EducationAnimal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
How did chicken breeders achieve
these remarkable improvements?
Balanced conventional selection
Conventional selection (aka science)
• Acts on naturally occurring genetic variation in the population
• Utilize hybrid vigor by implementing 4 way cross
• Very large number of progeny derive from elite breeding stock
• Large pedigrees
• Sophisticated techniques such as genomic selection
• Very comprehensive performance recording for a number of traits
• e.g. Cobb-Vantress records 56 individual observations per
each pedigree candidate
• More than 50% of these 56 individual traits are some
measure of health and fitness of an individual.
Animal Biotechnology and Genomics EducationAnimal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
Broiler breeding - Striking a
balance between economic and
well-being traits
Current breeding programs:
• Improving the efficiency of meat production 2–3%/yr
• Decreasing time to market for 5 lb bird by 0.74 days/yr
• Increasing breast meat yields for 5 lb bird by 0.5%/yr
• Decreasing feed-conversion (lb feed:lb gain) 0.025 /yr
At the same time
• Livability (survival) is improving 0.22%/yr
• Condemnation rates are decreasing 0.7%/yr.
M. N. Katanbaf, J. W. Hardiman; Primary broiler breeding—Striking a balance between economic and well-being
traits, Poultry Science, Volume 89, Issue 4, 1 April 2010, Pages 822–824, https://doi.org/10.3382/ps.2009-00439
Animal Biotechnology and Genomics Education
1961 Today
NumberofAnimals(Inbillions)
6.6B
56B
with Innovation
74.6B
Without innovation = no productivity increase
Current rate of genetic improvement
IowaPorkCongress 1/23/2019
18B less
Globally approximately 56
Billion broilers grown annually
1958: 13.25 lbs feed/5 lb broiler
2008: 8.25 lbs feed/5 lb broiler
Animal Biotechnology and Genomics Education
1988 Grand Champion Bull, National
Polled Hereford Show (frame 10).
1986. "Coblepond New Yorker"
weighed 2529 lbs and measured 65
inches tall at 35 mos. (Frame 10)
when he was Denver Champion.
1953. Grand Champion Angus
Female, International, 1953
1950. Grand Champion Steer,
International, weighing 1025 lbs
Images from Harlan Ritchie’s historical review of type
https://www.msu.edu/~ritchieh/historical/cattletype.html
IowaPorkCongress 1/23/2019
IowaPorkCongress 1/23/2019
US Cattle Inventory 1961 – 2015
Stocks (Thousand Head; blue, left) vs.
Production (Thousand Tonnes; red, right)
Animal Genomics and Biotechnology Education
IowaPorkCongress 1/23/2019
2016 Global Beef Production Numbers
Cattle numbers (Thousand Head; blue, left)
vs. Beef production (Thousand Tonnes; red, right)
Animal Genomics and Biotechnology Education
If I wanted to select for more efficient pig
√ Increase litter size
√ Increase the number of litters per year
√ Increase the amount of lean meat (pork/bacon) per pig
√ Decrease the amount of time needed to get to market
weight
√ Improve the efficiency of feed digestion (feed
conversion ratio)
√ Decrease feed needed to produce a finished pig
(increase growth rate)
Tokach et al 2016 (Performance enhancing technologies in swine production, Animal Frontiers, doi:10.2527/af.2016-0039)
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
U.S. Domestic Pork Production Per
Sow, 1930 - 2015
4200
800
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
If not for pig genetic improvement in
last 35 years…
● Combining increases in sow productivity & market weight, the average U.S.
pig farms are producing > 4,200 lb of live weight /sow/year compared with
~1770 lb in 1980.
● Market pigs require 4% LESS feed today to produce a 17% heavier carcass
● 28% increase in pork production with only a 10% increase in the annual
number of animals harvested
● It would take another 9 million sows (approximately 15
million in total) compared with today’s 6 million sows to
achieve current pork production using 1980 productivity
Tokach et al 2016 (Performance enhancing technologies in swine production, Animal Frontiers, doi:10.2527/af.2016-0039)
1000000 1000000 1000000
1000000 1000000 1000000 1000000 1000000 1000000
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
Crop/species 2017 total
production
2017 Amount
needed at
1950s rate
Additional needed
Soybeans 4,391,553,000 BU
(263,493,180,000 lb)
(119,769,627,000 kg)
82,591,000
Acres
(33,423,392 ha)
202,375,714
Acres
(81,898.546 ha)
~ 120 million
Acres
(~48 million ha)
Corn 14,604,067,000 BU
(817,827,752,000 lb)
(371,739,887,000 kg)
83,136,000
Acres
(33,643,946 ha)
382,305,419
Acres
(155,522,885 ha)
~ 300 million
Acres
(~120 million ha)
Dairy cattle 215,466,000,000 lbs
milk
(97,939,090,900 kg)
9,392,180 head 40,546,857 head ~ 31 million head
Broilers 41,039,000,000 lbs
meat
(18,654,090,900 kg)
8,913,000,000
head
13,324,350,649
head
~ 4.4 billion head
& additional
66.5 billion lbs feed as
less efficient FCR
IowaPorkCongress 1/23/2019
Meat production by country in 2016
Countries listed include the top 5 producing countries for
beef, chicken, pork, sheep and goat meat (FAO, 2018).
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Egg, beef, pork, chicken, fish and milk
production since 1980 and projected to 2050
(FAO 2018; Alexandratos and Bruinsma, 2012).
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
If I wanted to select for more efficient pig
√ Increase litter size
√ Increase the number of litters per year
√ Increase the amount of lean meat (pork/bacon) per pig
√ Decrease the amount of time needed to get to market weight
√ Improve the efficiency of feed digestion (feed conversion ratio)
√ Decrease feed needed to produce a finished pig (increase growth rate)
● Decrease the undigested nutrients coming out the back end in manure
● Improve the health profile of pig products for human consumption
● Select for pigs that do not get sick (improve the health profile of pigs!)
● Reduce the amount of fat and improve piglet survival
Tokach et al 2016 (Performance enhancing technologies in swine production, Animal Frontiers, doi:10.2527/af.2016-0039)
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
What is the problem we are trying to solve?
Phosphorus pollution in pig poop
EnviropigTM (Low-phosphorus manure)
“reduces fecal phosphorus output by up to 75%”
Nature Biotechnology 2001
www.uoguelph.ca/enviropig
Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
What is the problem we are trying to solve?
Improve the fatty acid composition of pork
Omega-3 fatty Acid Pigs
University of Missouri/Massachusetts General Hospital/Harvard Medical School
Heart-healthy pork
and bacon
Nature Biotechnology 2006
Animal Biotechnology and Genomics Education
Lillico et al. 2016. Mammalian interspecies substitution of immune modulatory alleles by
genome editing. Sci Rep 6:21645. Roslin Institute, Scotland
IowaPorkCongress 1/23/2019
Cases of African Swine Fever in domestic pigs in 2017
http://www.oie.int/wahis_2/public/wahid.php/countrymapinteractive
What is the problem we are trying to solve?
Editing for African Swine Fever
Animal Biotechnology and Genomics Education
What is the problem we are trying to solve?
Editing for Porcine Reproductive and
Respiratory Syndrome (PRRS) Virus
IowaPorkCongress 1/23/2019
Whitworth et al. 2016. Gene-edited pigs are
protected from porcine reproductive and
respiratory syndrome virus (PRRSV).
Nature Biotechnology 34:20-22.
University of Missouri, USA
Gene silencing creates PRRS resistance
Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
What is the problem we are trying to solve?
Editing to improve survival of piglets
PNAS 2017
Chinese Academy of Sciences
Low-fat and survivability
Zheng et al. 2017. Reconstitution of UCP1 using CRISPR/Cas9 in the white adipose tissue of pigs decreases fat deposition and
improves thermogenic capacity. Proc Natl Acad Sci U S A. 2017 Nov 7;114(45):E9474-E9482
Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
January 18th, 2017 FDA draft guidance 187
considers all gene edited animals whose genomes
have been “altered intentionally” to be drugs
:
I am not a drug
I am a cow
Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
“This [FDA] regulatory path will result in a lengthy and
expensive approval process, and functionally make any
gene edited animal a living animal drug—and every farm
raising them a drug manufacturing facility. It does not
allow for a risk-based approach that takes into
consideration the familiarity or complexity of the genetic
changes, and the fact that they could be achieved
through conventional breeding techniques (though at
the expense of time and genetic improvement from
decades of animal breeding). The FDA approach is also
out of step with the regulatory pathways under
development in the rest of the world”
National Pork Producers Council
Position paper on “Regulation of Gene Edited Animals”
Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
Please sign this petition if you agree that:
https://tinyurl.com/DNAisNOTaDRUG
https://www.gopetition.com/petitions/harmonize-us-gene-edited-food-regulations.html
0
100
200
300
400
500
600
1980 1990 2002 2015 2030 2050
Totalconsumption(milliont)
Developing - meat
Developed - meat
Developed - milk
Past and projected trends in consumption of meat
and milk in developing and developed countries
(Thornton, P.K. 2010 Livestock production: recent trends, future prospects. Philosophical Transactions of the
Royal Society B: Biological Sciences 365:2853-2867).
Whole Foods Market has announced they are
going to stock slow growing chickens
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
Entering the Whole Foods
“alternative fact” zone
Whole Foods, have committed “to replace fast-growing
chicken breeds with slower-growing breeds ”
Nothing else about how the chickens are being raised is changing,
they are just around for 14 more days before slaughter…..
Why? According to Theo Weening, the global meat buyer for Whole Foods
Market, the slow-growing bird "is a much better, healthier chicken, &
at the same time it's a much [more] flavorful chicken as well ".
Where is the objective, evidence-base to support this assertion?
Why is growing less than 50 grams/day for 58 days better for welfare than
growing at 61 grams/day for 44 days?
And why would this be a much more flavorful chicken if nothing else changed?
Animal Biotechnology and Genomics Education
1961 Today 2050
NumberofAnimals(Inbillions)
6.6B
56B
99.1B
131B
32B less
with Innovation
74.6B
Without innovation = no productivity increase
Current rate of genetic improvement
The impact of innovation on
animal breeding programs
IowaPorkCongress 1/23/2019
18B less
With new breeding methods allowed
175B
76B
Cognitive dissonance: mental discomfort
experienced by a person who simultaneously holds
two or more contradictory beliefs, ideas, or values
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
0
100
200
300
400
500
600
1980 1990 2002 2015 2030 2050
Totalconsumption(milliont)
Developing - meat
Developed - meat
Developing - milk
Developed - milk
Past and projected trends in consumption of meat
and milk in developing and developed countries
(Thornton, P.K. 2010 Livestock production: recent trends, future prospects. Philosophical Transactions of the
Royal Society B: Biological Sciences 365:2853-2867).
Mastitis-resistant cows
(inflammation of mammary gland)
Nature Biotechnology 23:445-451. 2005
www.ars.usda.gov
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Animal Biotechnology and Genomics Education
Lost rBST to the
fearmongering ($$)
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
↑ 7%
GHG
got responsibility?
we don’t either!
Our milk results in 7%
more methane emissions
per glass because we
cater to fearmongering
about safe technology to
increase our sales $$$
Increased methane
/unit milk by 7.3%
Capper JL, Castañeda-Gutiérrez E, Cady RA, Bauman DE. 2008 The environmental impact of
recombinant bovine somatotropin (rbST) use in dairy production. Proc Natl Acad Sci U S A 105:9668-73
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
↑ 7%
GHG
Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
http://www.pewinternet.org/2015/01/29/public-and-scientists-views-on-science-and-society/pi_2015-01-29_science-and-society-00-01/
Image from http://news.nationalgeographic.com/news/2014/06/150129-public-opinion-aaas-health-education-science/
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
http://weknowmemes.com/2012/07/dont-believe-everything-you-read-on-the-internet
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
Iowa State researchers found more articles mentioning GMOs in the U.S.
versions of the Russian-backed news sites RT and Sputnik than five other
American news organizations — Breitbart News, Huffington Post, Fox
News, CNN and MSNBC — combined.
Among the seven news sites, the two Russian news sites produced more
than 50 percent of all GMO-related articles and usually portrayed GMOs
negatively. RT published “nearly all” of the articles where the term GM
appeared as “click bait,” the researchers said.
https://www.desmoinesregister.com/story/money/agriculture/2018/02/25/russia-seeks-
influence-usa-opinion-gmos-iowa-state-research/308338002/
2/26/2018
Animal Biotechnology and Genomics Education
IowaPorkCongress 1/23/2019
What does non-GMO milk mean?
Farmers have to source more expensive
non-GMO feed, despite the fact there is no
detectible difference in the resulting milk
Animal Biotechnology and Genomics Education
• 50% decrease in global insecticide use on cotton as a
result of Bt cotton (~20 million kg active ingredient)
• GM crops reduced GLOBAL pesticide spraying by
618.7 million kg (~8.1%) and, as a result, decreased
the environmental impact associated with (less toxic)
herbicide and insecticide use on these crops by 18.6%.
• Important cuts in fuel use and no till, resulting in a
significant reduction in the release of GHG emissions ~
removing 11.9 million cars from the roads.
Brookes, G. and Barfoot, P., 2017. Environmental impacts of genetically modified (GM) crop use 1996–
2015: impacts on pesticide use and carbon emissions. GM crops & food, 8(2), pp.117-147.
DOI: 10.1080/21645698.2017.1309490
Why should consumers care?
Because GM has facilitated reductions in pesticide use
& environmental footprint of agricultural production
IowaPorkCongress 1/23/2019
Animal Biotechnology and Genomics Education
“We monetarize precluding farmer access to
safe technology which has proven to reduce
GHG emissions & global insecticide use.
WE HARM biodiversity & beneficial insects”
IowaPorkCongress 1/23/2019
GOODBYE
BUTTERFLY
Project
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
There is a need to defend objective truth –
especially around food & agriculture – because
“alternative ag facts” harm sustainability
“Praying on a parent’s
instinctive desire to protect
the health of their children
by using lies to scare them
into paying more money for
absence-labeled foods, or
worse to avoid fresh produce
altogether due to misguided
fears of GMOs or pesticides,
is the most unethical and
disingenuous way to increase
market share imaginable.”
- Alison Van Eenennaam
Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
N O N
UNICORN
Project
V E R I F I E D
I can make money by asking an increased
price for products brandishing absence
labels for something that does not exist!!
#marketinggenius
Animal Biotechnology and Genomics Education
Thanks for inviting me!
My laboratory receives public funding support from the
National Institute of Food and Agriculture and the
Biotechnology Risk Assessment Grant (BRAG) program,
U.S. Department of Agriculture, under award numbers
2011-68004-30367, 2013-68004-20364, 2015-67015-
23316, 2015-33522-24106 and 2017-33522-27097.
Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019

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Were those the days? Agriculture Then and Now

  • 1. Animal Genomics and Biotechnology Education Were Those the Days? Animal Ag Then & Now Alison Van Eenennaam, Ph.D. Cooperative Extension Specialist Animal Biotechnology and Genomics Department of Animal Science University of California, Davis, USA Email: alvaneenennaam@ucdavis.edu Twitter: @BioBeef Blog: http://biobeef.faculty.ucdavis.edu http://animalscience.ucdavis.edu/animalbiotech IowaPorkCongress 1/23/2019 http://blogs.egu.eu/network/palaeoblog/files/2012/10/science.jpg
  • 2. Animal breeders have made remarkable genetic modifications based solely on conventional breeding methods IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 3. Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019 Plant and animal breeders have perhaps the most compelling sustainability story of all time https://grist.files.wordpress.com/2015/12/corn-hybrid-yields.jpeg Chart from Matt DiLeo/USDA
  • 4. About half of this 369% increase in production efficiency is attributable to genetic improvement enabled by AI VandeHaar, M.J. and St-Pierre, N. (2006). Major Advances in Nutrition: Relevance to the Sustainability of the Dairy Industry. Journal of Dairy Science 89, 1280-1291. A I IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 5. “In the initial stages of attempting to develop AI there were several obstacles. The general public was against research that had anything to do with sex. Associated with this was the fear that AI would lead to abnormalities. Finally, it was difficult to secure funds to support research because influential cattle breeders opposed AI, believing that this would destroy their bull market.” Artificial insemination was initially a controversial technology Foote, R.H. 2002. The history of artificial insemination: Selected notes and notables. J. Anim. Sci., 80 (E. Suppl.) (2002), pp. E22–E32 IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 6. Name the technological innovation “It is unknown what long term health consequences may unfold. The studies are not adequate. Furthermore, this will likely not be available or cost effective for small farmers, it will decrease product acceptance and consumption.” Quote from the introduction of the Pasteurized Milk Ordinance 1924 IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education Name the technological innovation
  • 7. IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education Capper, JL and DE Bauman, 2013. The Role of Productivity in Improving the Environmental Sustainability of Ruminant Production Systems. Annual Review of Animal Biosciences. 1 pp. 9.1–9.21 ⅓
  • 8. Rate of genetic gain in marketed Holstein bulls has doubled since 2009 genomic selection introduction http://www.farms.com/news/two-million-genotypes-in-u-s-dairy-database-125448.aspx IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education GENOMICS
  • 9. The 8-week old body weight of broiler (meat) chickens has increased from 0.81 kg to 3.14 kg over the period 1957 to 2001, and approximately 80% of this four-fold increase has been the result of genetic selection. Havenstein, G., et al. (2003). Growth, livability, and feed conversion of 1957 versus 2001 broilers when fed representative 1957 and 2001 broiler diets. Poultry Science 82, 1500-1508. IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 10. Animal Biotechnology and Genomics EducationAnimal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019 How did chicken breeders achieve these remarkable improvements? Balanced conventional selection Conventional selection (aka science) • Acts on naturally occurring genetic variation in the population • Utilize hybrid vigor by implementing 4 way cross • Very large number of progeny derive from elite breeding stock • Large pedigrees • Sophisticated techniques such as genomic selection • Very comprehensive performance recording for a number of traits • e.g. Cobb-Vantress records 56 individual observations per each pedigree candidate • More than 50% of these 56 individual traits are some measure of health and fitness of an individual.
  • 11. Animal Biotechnology and Genomics EducationAnimal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019 Broiler breeding - Striking a balance between economic and well-being traits Current breeding programs: • Improving the efficiency of meat production 2–3%/yr • Decreasing time to market for 5 lb bird by 0.74 days/yr • Increasing breast meat yields for 5 lb bird by 0.5%/yr • Decreasing feed-conversion (lb feed:lb gain) 0.025 /yr At the same time • Livability (survival) is improving 0.22%/yr • Condemnation rates are decreasing 0.7%/yr. M. N. Katanbaf, J. W. Hardiman; Primary broiler breeding—Striking a balance between economic and well-being traits, Poultry Science, Volume 89, Issue 4, 1 April 2010, Pages 822–824, https://doi.org/10.3382/ps.2009-00439
  • 12. Animal Biotechnology and Genomics Education 1961 Today NumberofAnimals(Inbillions) 6.6B 56B with Innovation 74.6B Without innovation = no productivity increase Current rate of genetic improvement IowaPorkCongress 1/23/2019 18B less Globally approximately 56 Billion broilers grown annually 1958: 13.25 lbs feed/5 lb broiler 2008: 8.25 lbs feed/5 lb broiler
  • 13. Animal Biotechnology and Genomics Education 1988 Grand Champion Bull, National Polled Hereford Show (frame 10). 1986. "Coblepond New Yorker" weighed 2529 lbs and measured 65 inches tall at 35 mos. (Frame 10) when he was Denver Champion. 1953. Grand Champion Angus Female, International, 1953 1950. Grand Champion Steer, International, weighing 1025 lbs Images from Harlan Ritchie’s historical review of type https://www.msu.edu/~ritchieh/historical/cattletype.html IowaPorkCongress 1/23/2019
  • 14. IowaPorkCongress 1/23/2019 US Cattle Inventory 1961 – 2015 Stocks (Thousand Head; blue, left) vs. Production (Thousand Tonnes; red, right) Animal Genomics and Biotechnology Education
  • 15. IowaPorkCongress 1/23/2019 2016 Global Beef Production Numbers Cattle numbers (Thousand Head; blue, left) vs. Beef production (Thousand Tonnes; red, right) Animal Genomics and Biotechnology Education
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  • 17. If I wanted to select for more efficient pig √ Increase litter size √ Increase the number of litters per year √ Increase the amount of lean meat (pork/bacon) per pig √ Decrease the amount of time needed to get to market weight √ Improve the efficiency of feed digestion (feed conversion ratio) √ Decrease feed needed to produce a finished pig (increase growth rate) Tokach et al 2016 (Performance enhancing technologies in swine production, Animal Frontiers, doi:10.2527/af.2016-0039) Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
  • 18. U.S. Domestic Pork Production Per Sow, 1930 - 2015 4200 800 Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
  • 19. If not for pig genetic improvement in last 35 years… ● Combining increases in sow productivity & market weight, the average U.S. pig farms are producing > 4,200 lb of live weight /sow/year compared with ~1770 lb in 1980. ● Market pigs require 4% LESS feed today to produce a 17% heavier carcass ● 28% increase in pork production with only a 10% increase in the annual number of animals harvested ● It would take another 9 million sows (approximately 15 million in total) compared with today’s 6 million sows to achieve current pork production using 1980 productivity Tokach et al 2016 (Performance enhancing technologies in swine production, Animal Frontiers, doi:10.2527/af.2016-0039) 1000000 1000000 1000000 1000000 1000000 1000000 1000000 1000000 1000000 Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
  • 20. Crop/species 2017 total production 2017 Amount needed at 1950s rate Additional needed Soybeans 4,391,553,000 BU (263,493,180,000 lb) (119,769,627,000 kg) 82,591,000 Acres (33,423,392 ha) 202,375,714 Acres (81,898.546 ha) ~ 120 million Acres (~48 million ha) Corn 14,604,067,000 BU (817,827,752,000 lb) (371,739,887,000 kg) 83,136,000 Acres (33,643,946 ha) 382,305,419 Acres (155,522,885 ha) ~ 300 million Acres (~120 million ha) Dairy cattle 215,466,000,000 lbs milk (97,939,090,900 kg) 9,392,180 head 40,546,857 head ~ 31 million head Broilers 41,039,000,000 lbs meat (18,654,090,900 kg) 8,913,000,000 head 13,324,350,649 head ~ 4.4 billion head & additional 66.5 billion lbs feed as less efficient FCR IowaPorkCongress 1/23/2019
  • 21. Meat production by country in 2016 Countries listed include the top 5 producing countries for beef, chicken, pork, sheep and goat meat (FAO, 2018). IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 22. Egg, beef, pork, chicken, fish and milk production since 1980 and projected to 2050 (FAO 2018; Alexandratos and Bruinsma, 2012). IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 23. If I wanted to select for more efficient pig √ Increase litter size √ Increase the number of litters per year √ Increase the amount of lean meat (pork/bacon) per pig √ Decrease the amount of time needed to get to market weight √ Improve the efficiency of feed digestion (feed conversion ratio) √ Decrease feed needed to produce a finished pig (increase growth rate) ● Decrease the undigested nutrients coming out the back end in manure ● Improve the health profile of pig products for human consumption ● Select for pigs that do not get sick (improve the health profile of pigs!) ● Reduce the amount of fat and improve piglet survival Tokach et al 2016 (Performance enhancing technologies in swine production, Animal Frontiers, doi:10.2527/af.2016-0039) IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 24. Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019 What is the problem we are trying to solve? Phosphorus pollution in pig poop EnviropigTM (Low-phosphorus manure) “reduces fecal phosphorus output by up to 75%” Nature Biotechnology 2001 www.uoguelph.ca/enviropig
  • 25. Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019 What is the problem we are trying to solve? Improve the fatty acid composition of pork Omega-3 fatty Acid Pigs University of Missouri/Massachusetts General Hospital/Harvard Medical School Heart-healthy pork and bacon Nature Biotechnology 2006
  • 26. Animal Biotechnology and Genomics Education Lillico et al. 2016. Mammalian interspecies substitution of immune modulatory alleles by genome editing. Sci Rep 6:21645. Roslin Institute, Scotland IowaPorkCongress 1/23/2019 Cases of African Swine Fever in domestic pigs in 2017 http://www.oie.int/wahis_2/public/wahid.php/countrymapinteractive What is the problem we are trying to solve? Editing for African Swine Fever
  • 27. Animal Biotechnology and Genomics Education What is the problem we are trying to solve? Editing for Porcine Reproductive and Respiratory Syndrome (PRRS) Virus IowaPorkCongress 1/23/2019 Whitworth et al. 2016. Gene-edited pigs are protected from porcine reproductive and respiratory syndrome virus (PRRSV). Nature Biotechnology 34:20-22. University of Missouri, USA Gene silencing creates PRRS resistance
  • 28. Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019 What is the problem we are trying to solve? Editing to improve survival of piglets PNAS 2017 Chinese Academy of Sciences Low-fat and survivability Zheng et al. 2017. Reconstitution of UCP1 using CRISPR/Cas9 in the white adipose tissue of pigs decreases fat deposition and improves thermogenic capacity. Proc Natl Acad Sci U S A. 2017 Nov 7;114(45):E9474-E9482
  • 29. Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019 January 18th, 2017 FDA draft guidance 187 considers all gene edited animals whose genomes have been “altered intentionally” to be drugs : I am not a drug I am a cow
  • 30. Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019 “This [FDA] regulatory path will result in a lengthy and expensive approval process, and functionally make any gene edited animal a living animal drug—and every farm raising them a drug manufacturing facility. It does not allow for a risk-based approach that takes into consideration the familiarity or complexity of the genetic changes, and the fact that they could be achieved through conventional breeding techniques (though at the expense of time and genetic improvement from decades of animal breeding). The FDA approach is also out of step with the regulatory pathways under development in the rest of the world” National Pork Producers Council Position paper on “Regulation of Gene Edited Animals”
  • 31. Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019 Please sign this petition if you agree that: https://tinyurl.com/DNAisNOTaDRUG https://www.gopetition.com/petitions/harmonize-us-gene-edited-food-regulations.html
  • 32. 0 100 200 300 400 500 600 1980 1990 2002 2015 2030 2050 Totalconsumption(milliont) Developing - meat Developed - meat Developed - milk Past and projected trends in consumption of meat and milk in developing and developed countries (Thornton, P.K. 2010 Livestock production: recent trends, future prospects. Philosophical Transactions of the Royal Society B: Biological Sciences 365:2853-2867).
  • 33. Whole Foods Market has announced they are going to stock slow growing chickens IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 34. Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019 Entering the Whole Foods “alternative fact” zone Whole Foods, have committed “to replace fast-growing chicken breeds with slower-growing breeds ” Nothing else about how the chickens are being raised is changing, they are just around for 14 more days before slaughter….. Why? According to Theo Weening, the global meat buyer for Whole Foods Market, the slow-growing bird "is a much better, healthier chicken, & at the same time it's a much [more] flavorful chicken as well ". Where is the objective, evidence-base to support this assertion? Why is growing less than 50 grams/day for 58 days better for welfare than growing at 61 grams/day for 44 days? And why would this be a much more flavorful chicken if nothing else changed?
  • 35. Animal Biotechnology and Genomics Education 1961 Today 2050 NumberofAnimals(Inbillions) 6.6B 56B 99.1B 131B 32B less with Innovation 74.6B Without innovation = no productivity increase Current rate of genetic improvement The impact of innovation on animal breeding programs IowaPorkCongress 1/23/2019 18B less With new breeding methods allowed 175B 76B
  • 36. Cognitive dissonance: mental discomfort experienced by a person who simultaneously holds two or more contradictory beliefs, ideas, or values Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
  • 37. 0 100 200 300 400 500 600 1980 1990 2002 2015 2030 2050 Totalconsumption(milliont) Developing - meat Developed - meat Developing - milk Developed - milk Past and projected trends in consumption of meat and milk in developing and developed countries (Thornton, P.K. 2010 Livestock production: recent trends, future prospects. Philosophical Transactions of the Royal Society B: Biological Sciences 365:2853-2867).
  • 38. Mastitis-resistant cows (inflammation of mammary gland) Nature Biotechnology 23:445-451. 2005 www.ars.usda.gov IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education
  • 39. Animal Biotechnology and Genomics Education Lost rBST to the fearmongering ($$) Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019 ↑ 7% GHG got responsibility? we don’t either! Our milk results in 7% more methane emissions per glass because we cater to fearmongering about safe technology to increase our sales $$$
  • 40. Increased methane /unit milk by 7.3% Capper JL, Castañeda-Gutiérrez E, Cady RA, Bauman DE. 2008 The environmental impact of recombinant bovine somatotropin (rbST) use in dairy production. Proc Natl Acad Sci U S A 105:9668-73 Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019 ↑ 7% GHG
  • 41. Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019
  • 43. Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019
  • 45. IowaPorkCongress 1/23/2019 Animal Genomics and Biotechnology Education Iowa State researchers found more articles mentioning GMOs in the U.S. versions of the Russian-backed news sites RT and Sputnik than five other American news organizations — Breitbart News, Huffington Post, Fox News, CNN and MSNBC — combined. Among the seven news sites, the two Russian news sites produced more than 50 percent of all GMO-related articles and usually portrayed GMOs negatively. RT published “nearly all” of the articles where the term GM appeared as “click bait,” the researchers said. https://www.desmoinesregister.com/story/money/agriculture/2018/02/25/russia-seeks- influence-usa-opinion-gmos-iowa-state-research/308338002/ 2/26/2018
  • 46. Animal Biotechnology and Genomics Education IowaPorkCongress 1/23/2019 What does non-GMO milk mean? Farmers have to source more expensive non-GMO feed, despite the fact there is no detectible difference in the resulting milk
  • 47. Animal Biotechnology and Genomics Education • 50% decrease in global insecticide use on cotton as a result of Bt cotton (~20 million kg active ingredient) • GM crops reduced GLOBAL pesticide spraying by 618.7 million kg (~8.1%) and, as a result, decreased the environmental impact associated with (less toxic) herbicide and insecticide use on these crops by 18.6%. • Important cuts in fuel use and no till, resulting in a significant reduction in the release of GHG emissions ~ removing 11.9 million cars from the roads. Brookes, G. and Barfoot, P., 2017. Environmental impacts of genetically modified (GM) crop use 1996– 2015: impacts on pesticide use and carbon emissions. GM crops & food, 8(2), pp.117-147. DOI: 10.1080/21645698.2017.1309490 Why should consumers care? Because GM has facilitated reductions in pesticide use & environmental footprint of agricultural production IowaPorkCongress 1/23/2019
  • 48. Animal Biotechnology and Genomics Education “We monetarize precluding farmer access to safe technology which has proven to reduce GHG emissions & global insecticide use. WE HARM biodiversity & beneficial insects” IowaPorkCongress 1/23/2019 GOODBYE BUTTERFLY Project
  • 49. Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019 There is a need to defend objective truth – especially around food & agriculture – because “alternative ag facts” harm sustainability “Praying on a parent’s instinctive desire to protect the health of their children by using lies to scare them into paying more money for absence-labeled foods, or worse to avoid fresh produce altogether due to misguided fears of GMOs or pesticides, is the most unethical and disingenuous way to increase market share imaginable.” - Alison Van Eenennaam
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  • 51. Animal Biotechnology and Genomics EducationIowaPorkCongress 1/23/2019 N O N UNICORN Project V E R I F I E D I can make money by asking an increased price for products brandishing absence labels for something that does not exist!! #marketinggenius
  • 52. Animal Biotechnology and Genomics Education Thanks for inviting me! My laboratory receives public funding support from the National Institute of Food and Agriculture and the Biotechnology Risk Assessment Grant (BRAG) program, U.S. Department of Agriculture, under award numbers 2011-68004-30367, 2013-68004-20364, 2015-67015- 23316, 2015-33522-24106 and 2017-33522-27097. Animal Genomics and Biotechnology EducationIowaPorkCongress 1/23/2019