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Physiology of the cell
by
H. Khorrami Ph.D.
http://www.scribd.com/khorrami4
https://www.slideshare.net/khorrami4
khorrami4@yahoo.com
Contents:
• Plasma membrane
• Transport across membrane
• Membrane potential: resting & action potential
• Refractory period
• Chronaxie, rheobase, length constant,
• Synapses, electrical & chemical
• EPSP, IPSP
• Adaptation, plasticity, post tetanus potentiation, long term potentiation
• Lateral inhibition, synaptic fatigue,
• Receptive field
• Summation: temporal, spacial
• Signal transduction
• Apoptosis & necrosis
• Muscle fiber, neuromuscular junction, contraction, twitch, motor unit,
• Isometric & isotonic contraction
• Muscle metabolism, fatigue
Inner life of the cell
Cell membrane
• Two layer phospholipids ( 45% of weight)
• 2 × 1.7 + 0.1 nm
• Proteins ( 55% of weight)
• + 2 × 2nm
• Structural
• Integral
• Channel
• Pump
• Enzymes
• Receptors
• Orphan
• Non-orphan
• Carbohydrates
Properties of membranes
• Hydrophobic barriers between aqueous
compatments(cytosol & organelles)
• Flexible, formed into different shapes
• Selectively permeable to small molecules, not
charged or large
• Specialized protein complexes to control
impermeant molecules
• Store energy as concentration gradients
– Voltage(nerve cells)
– PH, K, Na and Ca gradients
Lipids 42%
• Phospholipid
• Cholesterol
• Glycolipid
Membrane lipids
Phospholipids
Lipids
Fatty acids
Omega-3
Common name Lipid name Chemical name
Hexadecatrienoic acid (HTA) 16:3 (n-3)
all-cis 7,10,13-
hexadecatrienoic acid
Alpha-linolenic acid (ALA) 18:3 (n-3)
all-cis-9,12,15-octadecatrienoic
acid
Stearidonic acid (SDA) 18:4 (n-3)
all-cis-6,9,12,15,-
octadecatetraenoic acid
Eicosatrienoic acid (ETE) 20:3 (n-3)
all-cis-11,14,17-eicosatrienoic
acid
Eicosatetraenoic acid (ETA) 20:4 (n-3)
all-cis-8,11,14,17-
eicosatetraenoic acid
Eicosapentaenoic acid (EPA,
Timnodonic acid)
20:5 (n-3)
all-cis-5,8,11,14,17-
eicosapentaenoic acid
Heneicosapentaenoic acid (HPA) 21:5 (n-3)
all-cis-6,9,12,15,18-
heneicosapentaenoic acid
Docosapentaenoic acid (DPA,
Clupanodonic acid)
22:5 (n-3)
all-cis-7,10,13,16,19-
docosapentaenoic acid
Docosahexaenoic acid (DHA, Cervonic
acid)
22:6 (n-3)
all-cis-4,7,10,13,16,19-
docosahexaenoic acid
Tetracosapentaenoic acid 24:5 (n-3)
all-cis-9,12,15,18,21-
tetracosapentaenoic acid
Tetracosahexaenoic acid (Nisinic acid) 24:6 (n-3)
all-cis-6,9,12,15,18,21-
tetracosahexaenoic acid
Omega-6
Common name Lipid name Chemical name
Linoleic acid 18:2 (n-6) all-cis-9,12-octadecadienoic acid
Gamma-linolenic acid (GLA) 18:3 (n-6) all-cis-6,9,12-octadecatrienoic acid
Eicosadienoic acid 20:2 (n-6) all-cis-11,14-eicosadienoic acid
Dihomo-gamma-linolenic acid
(DGLA)
20:3 (n-6) all-cis-8,11,14-eicosatrienoic acid
Arachidonic acid (AA) 20:4 (n-6) all-cis-5,8,11,14-eicosatetraenoic acid
Docosadienoic acid 22:2 (n-6) all-cis-13,16-docosadienoic acid
Adrenic acid 22:4 (n-6) all-cis-7,10,13,16-docosatetraenoic acid
Docosapentaenoic acid (Osbond
acid)
22:5 (n-6)
all-cis-4,7,10,13,16-docosapentaenoic
acid
Tetracosatetraenoic acid 24:4 (n-6)
all-cis-9,12,15,18-tetracosatetraenoic
acid
Tetracosapentaenoic acid 24:5 (n-6)
all-cis-6,9,12,15,18-tetracosapentaenoic
acid
Omega-9
Common name Lipid name Chemical name
Oleic acid† 18:1 (n-9) cis-9-octadecenoic acid
Eicosenoic acid† 20:1 (n-9) cis-11-eicosenoic acid
Mead acid 20:3 (n-9)
all-cis-5,8,11-eicosatrienoic
acid
Erucic acid† 22:1 (n-9) cis-13-docosenoic acid
Nervonic acid† 24:1 (n-9) cis-15-tetracosenoic acid
†Monounsaturated
Cholesterol
Glycolipids
Functions of carbohydrates
• Negative surface charge
• Attachment of cells together
• As receptor
• Blood group
• Immune recognition(MHC)
Na: 15
Cl: 4
K: 150
Mg
PO4
+
AA
Fat
Pco2
Protein
PH: 7.00
Na: 145
Cl: 104
K: 5
Ca: 10-3
Hco3
-
Glucose
Po2
PH: 7.40
Osmosis
Osmotic pressure
Osmotic pressure
• Based on decrease in freezing point
• A one molar solute -1.86⁰ C
• Plasma… -0.52o C
• 280mmol /L
• pv=nRT, p×1=1×62.63×310
• A one molar solute 19200mmHg
• Osmotic pressure of plasma?
• 5600mmHg
Could a hyperosmolar solution be isotonic?
• Yes
• Because tonicity depend on permeability of
the membrane
Total body water:
60% of body weight
40-42 L
Intracellular fluid:
40% of body weight
25-28 L
Extracellular fluid:
20% of body weight
14-15 L
Membrane transport
• Diffusion
• Facilitated diffusion
• Active transport
Simple & facilitated diffusion
Simple diffusion Facilitated diffusion
No saturation Saturation(Vmax)
Fast Low velocity
Chemical gradient Carrier protein
Linear correlation Non-linear correlation
Competition
Glucose transporters
transporter tissue function insulin stimulation
• Facilitative glucose transporters
• GT-1 BBB, Rbc, fibroblast glu uptake +
• GT-2 liver,β cell, intestine low-affinity -
• GT-3 brain, fibroblast glu uptake ?
• GT-4 fat, skl. muscle, heart glu uptake +++
• GT-5 small intestine, sperm fruc. transp. ?
• Active glucose transporters
• SGT-1 intestine, kidney intes. renal reabs -
Sodium channel
Active transport
Active Transport
Secondary active transport
• Symport
– Intestine
– Kidney
– Glucose & AA
• Antiport
– Heart
– Rbc
– Kidney
– Calcium, H+, HCO3, Cl- …
• https://www.youtube.com/watch?v=nsggCqbsVxs
• https://www.youtube.com/watch?v=jZd9ZyQH4vQ
Resting Membrane Potential
Goldman equation
Nernst equation
Gradients
Action potential
Threshold
Refractory period
Resting state
Depolarising phase
Repolarizing phase
Undershoot
Blocking the channel
Hypokalemia, Causes
• Alcohol use (excessive)
• Chronic kidney disease
• Diabetic ketoacidosis
• Diarrhea
• Vomiting
• Diuretics (water retention relievers)
• Corticosteroids
• Excessive laxative use
• Excessive sweating
• Folic acid deficiency
• Hyperaldosteronism
Hypokalemia, Sign & Symptoms
• Muscle cramp
• Fatigue
• Arrhythmia
• Constipation
• Myasthenia( muscle weakness)
• Hypertension
• Flaccid paralysis
• Myalgia
• Respiratory depression, respiratory acidosis
• Hyporeflexia
Hyperkalemia, Causes
• Kidney problem
• Medications
• Trauma, Tissue damage, hemolysis
• Alcoholism
• Burns, muscle fiber damage..
• Toxins, hemolysis
• Dehydration
• Heart failure
• Diabetes Type I( insulin dependent)
• Addison’s disease
• Internal bleeding
Hyperkalemia
• Is a life threatening disorder
• Tiredness or weakness
• Numbness or tingling in limbs
• Nausea or vomiting, abdominal pain
• Breathing problems
• Chest pain
• Palpitations, arrhythmia or irregular heartbeats
• If extreme, paralysis or heart failure
Synapse
Comparison of synapses
Electrical Chemical
Bidirectional Unidirectional
No delay Delay (1-2ms)
Fast Slow
Heart, Retina, NS(HC, Thalamus,..) N-M junction, CNS
Electrical vs. Chemical Synapse
Chemical synapse
• Neurotransmitter
• Depolarization of the presynaptic nerve
terminal
• Triggers the release of molecules Interact with
receptors on the postsynaptic neuron
• Excitation or inhibition of the postsynaptic
neuron.
76
Neurotransmitters:
Definition:
• Synthesized by presynaptic neuron
• Released by stimulation
• Microapplication of NT. Mimic the presyn. stimulation
• Presynaptic & microappl. Stim. Must be blocked by
pharmacologic agent
• High affinity uptake mechanism for the substance in
synaptic terminal
release of NT, synapsin
77
Neurotransmitters
• Small molecules
 Ach
 Biogenic amines
Dopamine
Norepinephrine
Epinephrine
5-HT
Histamine
 Amino acids
Aspartate
GABA
Glutamate
Glycine
Homocystein
Taurine
 Nucleotides
Adenosine
ATP
 Retrograde gases
Nitric oxide
Carbon monoxide
• Neuropeptides
 Opioid peptides
Leucine enkephalin
Methionine enkephaline
b - endorphin
Dynorphins
 Pituitary peptide
Oxytocin
Vasopressin
ACTH
TSH
 Gastrointestinal peptides
CCK
Sub-P
Neurotensin
Gastrin
Insulin
Glucagon
Somatostatin
 Others
Angiotensin
Bradykinin
Neuropeptide Y
78
Receptors of NTs
• Ionotropic:
ligand gating i.e. nicotinic
receptor (inhibited by
curare)
• Fast
• Mostly excitatory
• Metabotropic:
work by second
messenger
(G protein)
• Slow
• Excitatory or inhibitory
Neuropharmacology of some receptors
Neurotransmitter Receptor subtype Agonist Antagonist
Acetylcholine(Ach) Nicotinic receptor(
in N-M)
Muscarinic
receptor(in
Parasympathetic
NS, heart)
Nicotine
Muscarine,
pilocarpin,..
Curare
Atropine
Glutamate AMPA
NMDA
AMPA
NMDA
CNQX
AP5
GABA GABAA
GABAB
Muscimol
Baclofen
Bicuculine
Phaclofen
Acetylcholine receptors
Name Location Blocked by Agonists
Muscarinic End of postgang.
parasym
Atropine Metacholine
Carbachol
Betanechol
Pilocarpine
Nicotinic Autonomic ganglia
Adrenal medulla
N-M junction
Scopolamine
Hexamethonium
Tubocurarine
Nicotine
Curare
Amanita muscarina
https://www.youtube.com/watch?v=EChrlp4a-f4
Catecholamines
Ach (muscarinic receptor)
Drugs on Cholinergic Synapses
Glutamate receptors
Voltage-dependent NMDA
Calcium can trigger
• Enzymatic activity
• Opening of a variety of channels
• Gene expression
• Long-term memory
• Cell death
Excitotoxicity
• High demand of brain cells to oxygen & glucose
• Cardiac arrest, stroke, …..
• Limits of ATP
• Depolarizing the membrane
• Calcium leak into cells
• Glutamate release
• Depolarization
• More calcium
• ……………
• Cell death
TTX

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Cell physiology1.

  • 1. Physiology of the cell by H. Khorrami Ph.D. http://www.scribd.com/khorrami4 https://www.slideshare.net/khorrami4 khorrami4@yahoo.com
  • 2. Contents: • Plasma membrane • Transport across membrane • Membrane potential: resting & action potential • Refractory period • Chronaxie, rheobase, length constant, • Synapses, electrical & chemical • EPSP, IPSP • Adaptation, plasticity, post tetanus potentiation, long term potentiation • Lateral inhibition, synaptic fatigue, • Receptive field • Summation: temporal, spacial • Signal transduction • Apoptosis & necrosis • Muscle fiber, neuromuscular junction, contraction, twitch, motor unit, • Isometric & isotonic contraction • Muscle metabolism, fatigue
  • 3. Inner life of the cell
  • 4.
  • 5.
  • 6. Cell membrane • Two layer phospholipids ( 45% of weight) • 2 × 1.7 + 0.1 nm • Proteins ( 55% of weight) • + 2 × 2nm • Structural • Integral • Channel • Pump • Enzymes • Receptors • Orphan • Non-orphan • Carbohydrates
  • 7.
  • 8.
  • 9.
  • 10. Properties of membranes • Hydrophobic barriers between aqueous compatments(cytosol & organelles) • Flexible, formed into different shapes • Selectively permeable to small molecules, not charged or large • Specialized protein complexes to control impermeant molecules • Store energy as concentration gradients – Voltage(nerve cells) – PH, K, Na and Ca gradients
  • 11.
  • 12.
  • 13. Lipids 42% • Phospholipid • Cholesterol • Glycolipid
  • 17.
  • 18.
  • 20. Omega-3 Common name Lipid name Chemical name Hexadecatrienoic acid (HTA) 16:3 (n-3) all-cis 7,10,13- hexadecatrienoic acid Alpha-linolenic acid (ALA) 18:3 (n-3) all-cis-9,12,15-octadecatrienoic acid Stearidonic acid (SDA) 18:4 (n-3) all-cis-6,9,12,15,- octadecatetraenoic acid Eicosatrienoic acid (ETE) 20:3 (n-3) all-cis-11,14,17-eicosatrienoic acid Eicosatetraenoic acid (ETA) 20:4 (n-3) all-cis-8,11,14,17- eicosatetraenoic acid Eicosapentaenoic acid (EPA, Timnodonic acid) 20:5 (n-3) all-cis-5,8,11,14,17- eicosapentaenoic acid Heneicosapentaenoic acid (HPA) 21:5 (n-3) all-cis-6,9,12,15,18- heneicosapentaenoic acid Docosapentaenoic acid (DPA, Clupanodonic acid) 22:5 (n-3) all-cis-7,10,13,16,19- docosapentaenoic acid Docosahexaenoic acid (DHA, Cervonic acid) 22:6 (n-3) all-cis-4,7,10,13,16,19- docosahexaenoic acid Tetracosapentaenoic acid 24:5 (n-3) all-cis-9,12,15,18,21- tetracosapentaenoic acid Tetracosahexaenoic acid (Nisinic acid) 24:6 (n-3) all-cis-6,9,12,15,18,21- tetracosahexaenoic acid
  • 21. Omega-6 Common name Lipid name Chemical name Linoleic acid 18:2 (n-6) all-cis-9,12-octadecadienoic acid Gamma-linolenic acid (GLA) 18:3 (n-6) all-cis-6,9,12-octadecatrienoic acid Eicosadienoic acid 20:2 (n-6) all-cis-11,14-eicosadienoic acid Dihomo-gamma-linolenic acid (DGLA) 20:3 (n-6) all-cis-8,11,14-eicosatrienoic acid Arachidonic acid (AA) 20:4 (n-6) all-cis-5,8,11,14-eicosatetraenoic acid Docosadienoic acid 22:2 (n-6) all-cis-13,16-docosadienoic acid Adrenic acid 22:4 (n-6) all-cis-7,10,13,16-docosatetraenoic acid Docosapentaenoic acid (Osbond acid) 22:5 (n-6) all-cis-4,7,10,13,16-docosapentaenoic acid Tetracosatetraenoic acid 24:4 (n-6) all-cis-9,12,15,18-tetracosatetraenoic acid Tetracosapentaenoic acid 24:5 (n-6) all-cis-6,9,12,15,18-tetracosapentaenoic acid
  • 22. Omega-9 Common name Lipid name Chemical name Oleic acid† 18:1 (n-9) cis-9-octadecenoic acid Eicosenoic acid† 20:1 (n-9) cis-11-eicosenoic acid Mead acid 20:3 (n-9) all-cis-5,8,11-eicosatrienoic acid Erucic acid† 22:1 (n-9) cis-13-docosenoic acid Nervonic acid† 24:1 (n-9) cis-15-tetracosenoic acid †Monounsaturated
  • 23.
  • 26. Functions of carbohydrates • Negative surface charge • Attachment of cells together • As receptor • Blood group • Immune recognition(MHC)
  • 27.
  • 28.
  • 29. Na: 15 Cl: 4 K: 150 Mg PO4 + AA Fat Pco2 Protein PH: 7.00 Na: 145 Cl: 104 K: 5 Ca: 10-3 Hco3 - Glucose Po2 PH: 7.40
  • 32. Osmotic pressure • Based on decrease in freezing point • A one molar solute -1.86⁰ C • Plasma… -0.52o C • 280mmol /L • pv=nRT, p×1=1×62.63×310 • A one molar solute 19200mmHg • Osmotic pressure of plasma? • 5600mmHg
  • 33.
  • 34.
  • 35. Could a hyperosmolar solution be isotonic? • Yes • Because tonicity depend on permeability of the membrane
  • 36. Total body water: 60% of body weight 40-42 L Intracellular fluid: 40% of body weight 25-28 L Extracellular fluid: 20% of body weight 14-15 L
  • 37.
  • 38.
  • 39. Membrane transport • Diffusion • Facilitated diffusion • Active transport
  • 40.
  • 41.
  • 42.
  • 43. Simple & facilitated diffusion Simple diffusion Facilitated diffusion No saturation Saturation(Vmax) Fast Low velocity Chemical gradient Carrier protein Linear correlation Non-linear correlation Competition
  • 44. Glucose transporters transporter tissue function insulin stimulation • Facilitative glucose transporters • GT-1 BBB, Rbc, fibroblast glu uptake + • GT-2 liver,β cell, intestine low-affinity - • GT-3 brain, fibroblast glu uptake ? • GT-4 fat, skl. muscle, heart glu uptake +++ • GT-5 small intestine, sperm fruc. transp. ? • Active glucose transporters • SGT-1 intestine, kidney intes. renal reabs -
  • 48. Secondary active transport • Symport – Intestine – Kidney – Glucose & AA • Antiport – Heart – Rbc – Kidney – Calcium, H+, HCO3, Cl- …
  • 53.
  • 54.
  • 56.
  • 64.
  • 66.
  • 67. Hypokalemia, Causes • Alcohol use (excessive) • Chronic kidney disease • Diabetic ketoacidosis • Diarrhea • Vomiting • Diuretics (water retention relievers) • Corticosteroids • Excessive laxative use • Excessive sweating • Folic acid deficiency • Hyperaldosteronism
  • 68. Hypokalemia, Sign & Symptoms • Muscle cramp • Fatigue • Arrhythmia • Constipation • Myasthenia( muscle weakness) • Hypertension • Flaccid paralysis • Myalgia • Respiratory depression, respiratory acidosis • Hyporeflexia
  • 69. Hyperkalemia, Causes • Kidney problem • Medications • Trauma, Tissue damage, hemolysis • Alcoholism • Burns, muscle fiber damage.. • Toxins, hemolysis • Dehydration • Heart failure • Diabetes Type I( insulin dependent) • Addison’s disease • Internal bleeding
  • 70. Hyperkalemia • Is a life threatening disorder • Tiredness or weakness • Numbness or tingling in limbs • Nausea or vomiting, abdominal pain • Breathing problems • Chest pain • Palpitations, arrhythmia or irregular heartbeats • If extreme, paralysis or heart failure
  • 72. Comparison of synapses Electrical Chemical Bidirectional Unidirectional No delay Delay (1-2ms) Fast Slow Heart, Retina, NS(HC, Thalamus,..) N-M junction, CNS
  • 74.
  • 75. Chemical synapse • Neurotransmitter • Depolarization of the presynaptic nerve terminal • Triggers the release of molecules Interact with receptors on the postsynaptic neuron • Excitation or inhibition of the postsynaptic neuron.
  • 76. 76 Neurotransmitters: Definition: • Synthesized by presynaptic neuron • Released by stimulation • Microapplication of NT. Mimic the presyn. stimulation • Presynaptic & microappl. Stim. Must be blocked by pharmacologic agent • High affinity uptake mechanism for the substance in synaptic terminal release of NT, synapsin
  • 77. 77 Neurotransmitters • Small molecules  Ach  Biogenic amines Dopamine Norepinephrine Epinephrine 5-HT Histamine  Amino acids Aspartate GABA Glutamate Glycine Homocystein Taurine  Nucleotides Adenosine ATP  Retrograde gases Nitric oxide Carbon monoxide • Neuropeptides  Opioid peptides Leucine enkephalin Methionine enkephaline b - endorphin Dynorphins  Pituitary peptide Oxytocin Vasopressin ACTH TSH  Gastrointestinal peptides CCK Sub-P Neurotensin Gastrin Insulin Glucagon Somatostatin  Others Angiotensin Bradykinin Neuropeptide Y
  • 78. 78 Receptors of NTs • Ionotropic: ligand gating i.e. nicotinic receptor (inhibited by curare) • Fast • Mostly excitatory • Metabotropic: work by second messenger (G protein) • Slow • Excitatory or inhibitory
  • 79. Neuropharmacology of some receptors Neurotransmitter Receptor subtype Agonist Antagonist Acetylcholine(Ach) Nicotinic receptor( in N-M) Muscarinic receptor(in Parasympathetic NS, heart) Nicotine Muscarine, pilocarpin,.. Curare Atropine Glutamate AMPA NMDA AMPA NMDA CNQX AP5 GABA GABAA GABAB Muscimol Baclofen Bicuculine Phaclofen
  • 80. Acetylcholine receptors Name Location Blocked by Agonists Muscarinic End of postgang. parasym Atropine Metacholine Carbachol Betanechol Pilocarpine Nicotinic Autonomic ganglia Adrenal medulla N-M junction Scopolamine Hexamethonium Tubocurarine Nicotine
  • 83.
  • 87.
  • 90. Calcium can trigger • Enzymatic activity • Opening of a variety of channels • Gene expression • Long-term memory • Cell death
  • 91.
  • 92.
  • 93. Excitotoxicity • High demand of brain cells to oxygen & glucose • Cardiac arrest, stroke, ….. • Limits of ATP • Depolarizing the membrane • Calcium leak into cells • Glutamate release • Depolarization • More calcium • …………… • Cell death
  • 94. TTX