A workshop hosted by the South African Journal of Science aimed at postgraduate students
and early career researchers with little or no experience in writing and publishing journal
articles.
1. 8 June 2023
9:00 – 15:00
@SAJS_Official @ASSAf_Official
PROGRAMME
9:00 – 9:05 Welcome
9:05 – 10:35 Writing: what the research tells us – Chrissie Boughey
10:40 – 11:40 Writing and submitting a journal article – Leslie Swartz
11:40 – 12:00 Q&A
12:30 – 13:15 Writing for a non-specialist audience – Basil Brooke
13:15 – 14:00 Writing tools, resources and tricks of the trade to help you – Jennifer Fitchett
14:00 – 15:00 Q&A
Writing for a
scholarly journal
2. 8 June 2023
9:00 – 15:00
Basil Brooke
Head of the Vector
Control Reference
Laboratory, NICD
SAJS Outstanding Article
Awardee 2022
Jennifer Fitchett
Professor of Physical
Geography, Wits University
Associate Editor: SAJS
Chrissie Boughey
Emeritus Professor, Centre
for Postgraduate Studies,
Rhodes University
Associate Editor: SAJS
Leslie Swartz
Professor of Psychology,
Stellenbosch University
Editor-in-Chief: SAJS
@SAJS_Official @ASSAf_Official
Meet the presenters
Writing for a
scholarly journal
3. Writing: What the
research tells us
Chrissie Boughey
Emeritus Professor
Rhodes University
8 June 2023
Writing for a
scholarly journal
@SAJS_Official @ASSAf_Official
#AcademicWriting
4. A lot of research on writing
• Focuses on the products of writing (i.e written
texts)
• It analyses texts
• It tells us what the products should look like
• So, it gives us descriptions of what, for example,
journal articles look like
5. The problem is . . .
• That this kind of research doesn’t tell us about how
to produce those perfect texts
• It doesn’t tell us how to address the actual writing
of a text
6. The other side of writing research
• Looks at writers as they write
• Identifies what writers do as they are writing
7. This kind of research on writing
• Began in the 1970s
• Has increasingly become more sophisticated in the
methods it uses
• Has looked at writers writing
• all sorts of different kinds of texts (academic text, fiction,
reports …)
• in a wide range of languages (including writers using
non-alphabetic writing systems)
8. Over time
• It became possible to identify what ‘successful’
writers did and to compare what they did with
what ‘unsuccessful’ writers did
• This gave allowed us to identify successful writing
strategies
• The strategies were then developed into an
‘approach’ to teaching writing
9. So, what did the successful
writers do?
• They wrote for themselves first to find out what
they wanted to say
• They used informal writing strategies (freewriting,
journaling)
• They did not worry about the formalities of writing
(spelling, grammar, punctuation) at this stage
• They wrote in any language
• They used writing as a tool for learning
10. Over time
• They moved into writing for a prospective reader
(the reader of a journal, the examiner of a thesis…)
• As they wrote, they imagined the reactions of this
intended reader to what they were saying (‘If I say
this, they’ll say that, so I can’t say this’)
• Writing thus became a process of drafting and
redrafting a text in response to this imaginary
conversation
11. If they got stuck
• They moved back into the less formal ‘generative’
writing they had used to find out what they wanted
to say in the first place
12. Even at the drafting stage
• They did not pay a great deal of attention to the
form of the writing
13. Finally,
• When they thought they had satisfied or ‘silenced’
their reader they moved into editing their text
• Editing involved a process of polishing the text to
ensure it was technically perfect and stylistically
appropriate
14. The strategies used by successful
writers
• Allow us to identify three stages in a writing
process
15. A writing process
Generative Writing Drafting Editing
Focus on identifying ideas
‘Informal’ writing
No concern for reader
Moves into concern for
reader
Imaginary conversation
Drafting and redrafting
Focus on making
meanings stand up to
critique
Focus on form – on saying
things better at a
linguistic level
Focus on technical aspects
of writing
16. Importantly
• Movement between the three stages was not linear
• Writers began with generative writing
• Moved into drafting but
• If they got stuck went back to generative writing
17. Many writers
• Ignore the generative writing (i.e. using writing as a
tool to find out what they want to say)
• Move straight into writing for an audience
(drafting)
• Even worse, they combine writing for an audience
with editing
19. Freewriting
• Identify a question to answer (‘What’s the
relationship of x to y?’ ‘What does xxx really
mean?)
• Set a time limit (3,5,7 minutes)
• Write without stopping for the entire time
• Don’t worry about spelling, grammar, punctuation
• Write in any language
• When the time is up, stop!
• Read what came out
20. A reading journal
• Typical strategies for reading include highlighting,
underlining and making notes
• These focus on identifying important points, on
understanding and remembering
• Academic writing requires us to make knowledge
claims (statements about what we believe are true) and
to support them with evidence
• This is particularly true of the literature review section
• How does highlighting, underlining or making notes
allow you to identify those knowledge claims?
21. A reading journal
• Open a folder on your computer or buy a notebook
• Write a complete reference for everything you read at
the top of a new file or new page
• Sit somewhere comfortable
• Read without taking notes, highlighting or underlining
• Focus on what the author is saying, what claims they
are making and what the evidence is for those claims
• When you have finished reading, write an entry in your
journal
22. Dear Diary . . .
• How does this text agree or disagree with other
texts I have read?
• How does it relate to my article/study?
• What’s interesting about it?
• What do I agree with/disagree with?
23. Drafting: your audience
• Other sessions in this workshop will help you to
know your audience better
• Ask questions like
• What do they know (so what don’t I need to tell them)?
• What don’t they know (so what do I need to tell them)?
• What objections can they make?
• How does this evidence support the claim I am making?
What’s missing?
• Your aim is to ‘silence’ your reader
24. Editing
• Sit alone in a closed room and read your text aloud
to yourself
• You will often hear mistakes you can’t see
25. Remember
• An article is about presenting new knowledge to
your audience
• What are your knowledge claims?
• How well supported are those claims with
evidence?
26. Writing and
submitting a
journal article
Leslie Swartz
8 June 2023
Writing for a
scholarly journal
@SAJS_Official @ASSAf_Official
#AcademicWriting
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49. Writing for a non-
specialist audience
Basil Brooke
National Institute for
Communicable Diseases
8 June 2023
Writing for a
scholarly journal
@SAJS_Official @ASSAf_Official
#AcademicWriting
50. Take a step back
Think about the context of your field of research:
• In which country do you work?
• Is your field of research academic, applied, operational?
• Is the significance of your work local, regional, global?
• Your work is significant, but do you truly know why?
• What is your work’s benefit?
• To whom is your work significant?
• Are you inclined to understate the value of your work?
• Are you inclined to overstate the value of your work?
• Who are your target audience? (think about this broadly – there are probably
more stakeholders than you think)
• What are the important features of your work that non-specialists really need to
know?
51. Stakeholders
• A stakeholder is anyone who has an interest in your work e.g.,
colleagues, other researchers, senior staff at tertiary institutions,
policy-makers, industry, donors, project funders, NGOs, professional
societies, general interest readers, media channels.
• It is always a good idea to do a stakeholder analysis so that you know
who your audience is.
• A list of stakeholders will enable you to disseminate your work more
effectively, and particular persons in your list may be in a position to
champion your work.
52. Academic research
• Often described as ‘blue-sky’ research i.e. has no
immediate or obvious practical application but
adds to humanity’s knowledge base.
• A good example is deployment of the James
Webb Space Telescope that aims to provide
information on how the universe formed,
amongst other things.
• This is an important frontier in science that will
help us contextualize our existence.
• It will not solve any of the world’s pressing issues
such as food security, pandemic preparedness,
the preservation of biodiversity and global
warming / climate change.
53. Applied research
• This is basically research development of new
technologies and methods that make
production processes, services and
interventions more efficient.
• Examples include the development of vaccines
that help prevent and even eliminate certain
diseases, technologies for harnessing renewable
energy sources, environmentally-friendly
technologies that enhance food production.
• One can even think of artificial intelligence and
drone warfare as forms of applied research.
54. Operational research
• Usually based on the collation and
interpretation of surveillance information i.e.
using population or environmental data (human
communities, populations of other organisms,
environmental indicators) to inform
intervention policies and practices.
• Some examples are census data for the
provision of services, disease surveillance to
inform public health policy and practice,
environmental surveys to inform anti-pollution
initiatives, fauna and flora surveys to inform
biodiversity and conservation initiatives,
geological surveys to inform mining practices.
55. The hourglass – IMRAD
Introduction
Aim objectives
Methods
Results
Discussion conclusions
Abstract
Title
56. Title – try to make it catchy and interesting to
non-specialists
Insecticide resistance in the malaria vector Anopheles arabiensis in
northern KwaZulu-Natal, South Africa
Malaria risk and receptivity: Continuing development of insecticide
resistance in the major malaria vector Anopheles arabiensis in northern
KwaZulu-Natal, South Africa
57. Sections of a manuscript
Introduction
• This section is especially important for non-specialist readers because it gives
them the background they need to understand the objectives of the work, its
context and significance.
• Avoid specialist jargon as far as possible, and where very specific terms and
phrases are used, they should be defined for the reader.
• Begin this section with an introduction to the subject of the manuscript (eg.
malaria in South Africa), followed by the broad context of the subject (malaria is
endemic in some provinces), followed by the specific context of the subject
(malaria control is based on certain methods), followed by those factors that have
the most bearing on the context (malaria vector mosquitoes, control methods,
insecticide resistance), followed by a problem statement (insecticide resistance
threatens to destabilize the effectiveness of the malaria control programmes),
followed by the aim of the project (the aim of this project was to evaluate
insecticide resistance in malaria vector mosquitoes in ?)
• List specific objectives that can be linked to the Methods section
58. Example – stratifying statements
Specialist collaborator: Anopheles gambiae is monophyletic for 2Rb in Namuno
Specialist: Anopheles gambiae is monophyletic for the 2Rb inversion in Namuno
General specialist: Anopheles gambiae is monophyletic for the 2Rb chromosome
inversion haplotype in the Namuno District
Within-field colleague: The major malaria vector Anopheles gambiae is
monophyletic for the 2Rb chromosomal inversion haplotype in the Namuno District
of Cabo Delgado Province in northern Mozambique
General reader: The major malaria transmitting mosquito Anopheles gambiae has
only one genetic arrangement at a particular chromosomal site, termed the 2Rb
inversion site, in the Namuno region of Cabo Delgado Province in northern
Mozambique
59. Sections of a manuscript
Methods
• Describe the methods in enough detail for the
experiments/surveillance to be replicated.
• Describe the materials used and give details of
the supplier/manufacturer.
• For statistical software, provide the name,
version and manufacturer.
• Link the description of the methods to each
objective.
• A diagrammatic representation of the methods
used and flow of activities often helps.
• Use this as a checklist:
Who?
Where?
What?
How?
60. Sections of a manuscript
Results
• This section concisely highlights the major results of the analysis.
• Explain what you found.
• Move from simple to complex.
• Judiciously use tables and figures and do not repeat information that
is in the tables in the text as well.
• Provide an explanatory legend to each table and figure that is detailed
enough that the reader does not have to refer to the text for clarity.
61. Sections of a manuscript
Discussion
• Provide your interpretation of the results.
• Link your primary results back to your objectives.
• Interpret your results in their context.
• Compare and contrast your study with the findings of other relevant
studies.
• Write a conclusion.
• Provide recommendations if necessary.
62. What to conclude
• Do not make statements outside of the scope of information or data that
you provide in the manuscript.
• Academic rigor means that all conclusions are supportable by the evidence
available. If you step outside of this maxim, you are really just giving critics
ammunition and reasons to be skeptical of the value of your work.
• When evaluating the significance of your work, humility is your best friend.
Know, understand and state the limitations of your work. There are always
limitations.
• Acknowledge relevant work done by other researchers in your field and
show how their work relates to yours. Nobody works in a vacuum, and you
need the respect and support of your colleagues, principals and peers.
63. Meaning and unsupported inference
Statement: The major malaria transmitting mosquito Anopheles gambiae
has only one genetic arrangement at a particular chromosomal site, termed
the 2Rb inversion site, in the Namuno region of Cabo Delgado Province in
northern Mozambique
Conclusion:
• This suggests reduced genetic variation in the Anopheles gambiae
population of that particular region
• This population is therefore likely more susceptible to insecticides than
other Anopheles gambiae populations
• This population is likely to be a weaker transmitter of malaria than other
Anopheles gambiae populations
• This could explain why there is less malaria in Namuno than in other areas
64. Meaning and reasonable speculation
Statement: The major malaria transmitting mosquito Anopheles gambiae
has only one genetic arrangement at a particular chromosomal site, termed
the 2Rb inversion site, in the Namuno region of Cabo Delgado Province in
northern Mozambique
Conclusion:
• This suggests reduced genetic variation in the Anopheles gambiae
population of that particular region
• It is possible that such reduced variation is a consequence of past
bottlenecks
• These may have been caused by insecticide-based control operations in the
Namuno region over a prolonged period
• The implications for malaria transmission in that region are unclear
65. Recommendations
• This is especially important in certain fields, particularly applied and
operational research.
• Consult with professional organizations and/or government departments
to ensure each recommendation is feasible, reasonable and does not
contradict policy or tried-and-tested practice.
• Try to provide recommendations in the SMART format (Specific,
Measurable, Achievable, Relevant and Time-bound).
• Example:
Vague: Insecticide resistance should be managed
SMART: Insecticide resistance in affected malaria vector populations can be
managed using a mosaic approach that includes at least two unrelated
products with different modes of action. Consideration should be given to
doing this annually by the provincial malaria control programmes using
preset targets for each product against which coverage can be measured.
66. Abstract
• An abstract allows readers to quickly decide whether the paper is relevant
to them and whether they need to read the whole manuscript.
• An abstract must be self-contained and make sense without further
reference to the actual paper. It highlights the key content areas, especially
the main outcomes.
• It is best to write the abstract in the IMRAD format (required by most
journals)
• As with the other sections, avoid specialist jargon as far as possible.
• Most journals place a strict word limit on abstracts (usually 250 – 300
words).
• It is easier to write the abstract after the main text is complete.
67. Engagement
• Be willing and available to discuss your work within your field of
expertise and with the public at large, usually via the media or on
social platforms.
• Know the boundaries of your work and do not overstep them. What
you say on social media is as good as published.
• To do this effectively, you must have key explanatory phrases that
avoid technical jargon, are understandable to a general audience, and
stay within the boundaries of the evidence you have.
68. Acknowledgements
• Special thanks to the editors and workshop organizers of the South
African Journal of Science (SAJS) for this opportunity
• Thanks also to the management, editorial and production team of the
Public Health Bulletin of South Africa (PHBSA) for their support
69.
70. Writing Tools, Resources and
Tricks of the Trade to Help You
South African Journal of Science Writing Workshop
8 June 2023
Prof Jennifer Fitchett
SAJS Associate Editor Earth and Environment
Jennifer.Fitchett@wits.ac.za
71. What does a paper writing toolbox look
like?
• Inspiration
• Time management
• Structure
• Improving figures
• Improving writing
style
• Referencing
72. Tools to get inspired
• Instagram accounts
• Study tubers
• Podcasts
• Mood boards
• Goal setting
• Reading groups
• Writing groups
• Accountability buddy
78. Time management tools
Pomodoro Method
NB: This is refuted by proponents of the flow state, where focused
work of up to 2 hours can take place with little distraction
79. Tools for beating writers’ block
• Free writing
• Mind mapping
• Keeping a reflective
journal
• Going for a walk
• Body doubling
• Change to a different
task for a while
80. Tips to determine structure
Identify 5 papers similar to yours
Identify 5 papers from the journal you intend to
submit to
Read these through with a critical eye to structure
and layout
Write up your headings and subheadings, with
notes on paragraph order
Check the authors’ guidelines before you start
writing
81. Tools to improve your figures
• Create a Pinterest board of your favourite figures to draw
inspiration from
• Learn the basics of CANVA or photoshop
• Make sure you’re familiar with graphical software
relevant to your discipline – eg. C2, ARCGIS, CAD
• Youtube tutorials!
82. Tools for keeping on top of referencing
• Saving the files with your academic papers with a
sensible system
• Keeping notes on papers in a clear filing system
• Referencing software
• Referencing style in the author’s guidelines
• Working in split screen
• Reference checks at the end
84. Tools to improve your writing style
• Read, read and read!
• Keep a journal where you record notes on good
stylistic elements
• Google and keep record of words you don’t know
• Ensure your spell and grammar check are active
• Read your work out loud when you’re finished
writing
• Ask a friend to read through it, and do the same for
them