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VIRUSES
- Dr. ANKUR KUMAR
Characteristics of Viruses
Obligate intracellular
Possess either DNA or RNA but never both.
Filterable- They are smaller than bacteria, passed trough
bacterial filters.
Can not be grown on artificial cell free media
Multiply by a complex method, not by binary fission as
seen in bacteria.
Do not have a proper cellular organization.
Do not have cell wall or cell membrane or cellular
organelles including ribosomes.
Lack enzymes necessary for protein and nucleic acid
synthesis.
Not susceptible to antibiotics.
MORPHOLOGY OF VIRUS
MORPHOLOGY OF VIRUS
• Viruses possess a
Nucleic acid-
• DNA or RNA
• single or double stranded, circular or linear, segmented
or unsegmented
• surrounded by a protein coat called -----
Capsid
• composed of polypeptides called- capsomeres
• Have antigenic property and specific for each virus
• Specific arrangement of capsomeres called- Symmetry
– Icosahedral (cubical) symmetry
– Helical symmetry
– Complex symmetry
– Nucleic acid & capsid together k/s Nucleocapsid
MORPHOLOGY OF VIRUS
• Some viruses also have an outer envelope
surrounding the nucleocapsid
Lipoprorein in nature (Lipid+Protein)
Lipid part- derived from the host cell membrane
Protein part- virus coded, made up of peplomers,
which project as spikes on the surface of the
envelope-(e.g. Influenza viruses have hemagglutinin & neuraminidase
peplomers)
Peplomers are antigenic, bind to specific receptors on
the host cells.
Most Viruses are Enveloped Except
• DNA viruses- Parvovirus, Adenovirus & Papovavirus
• RNA viruses- Picornavirus, Hepatitis A virus & Hepatitis E
virus.
MORPHOLOGY OF VIRUS
• Size of the Viruses
Extremely small, vary from 20-400 nm in size.
Smallest- Parvovirus (20 nm)
Largest- Poxvirus (400nm).
MORPHOLOGY OF VIRUS
• Shapes of the Viruses
Most are roughly spherical, Except -----
• Rabies virus: Bullet shaped
• Rotavirus- wheel shaped
• Coronavirus-petal shaped peplomers
• Ebolavirus: Filamentous shaped
• Poxvirus: Brick shaped
• Adenovirus: Space vehicle shaped
• Astrovirus-star shaped peplomers
VIRAL REPLICATION
• Attachment Penetration
Uncoating Biosynthesis
Assembly Maturation
Release
11
•
VIRAL REPLICATION
Viruses invade cells and use the
host cell's machinery to synthesize
more of their own macromolecules.
• Once inside the host virus will either go
into a
1. Lytic Cycle-
destroying the host cell during
reproduction.
or
• It will go into a
2. Lysogenic Cycle –
a parasitic type of partnership
with the cell
10
Virus injects its
DNA
Virus DNA
commands host cell
to make new viral
parts
New viral parts
assembled
Cell lyses (breaks
apart) and new
viruses are
released
Virus attaches to
host cell.
LYTIC CYCLE
12
LYSOGENIC CYCLE
13
• Does not begin immediately
• Viral DNA (called a prophage) attaches
to the host cell’s chromosomes – lies
dormant.
• The virus DNA integrates with the host DNA
and the host’s cell helps create more virus
DNA.
LYSOGENIC CYCLE
Morphological Changes in the Host Cells
• Damage to host cell chromosomes: -
with HSV or adenovirus infection- Formation of chromatin rings
surrounding the nuclear membrane in host cells.
• Formation of inclusion body-
aggregates o f virions or viral proteins and other products of viral
replication.
characteristic of specific viral infections.
demonstrated in virus infected cells under the light microscope.
have distinct size, shape, location and staining properties to the
host cell.
lntracytoplasmic indusion bodies:
Acidophilic, seen as pink structures when stained with Giemsa or eosin
methylene blue stains (e.g. most pox.viruses and rabies
lntranuclear inclusion bodies:
basophilic in nature. Cowdry (1934) had classfied them into -----
– Cowdry type A inclusions: They are variable in size and have granular
appearance.
– Cowdry type B inclusions: They a re more circumscribed and multiple .
Inclusion body
LABORATORY DIAGNOSIS
• Direct Demonstration of Virus
 Electron microscopy
 lmmunoelectron microscopy
 Fluorescent microscopy
 Light microscopy
• Histopathological staining: To demonstrate inclusion bodies
• lmmunoperoxidase staining
• Detection of viral antigens
 ELISA, direct IF, ICT, flow through assays.
• Detection of the Specific Antibodies
 Conventional techniques- HAI, neutralization test and CFT.
 Newer diagnostic formats- ELISA, ICT, flow through assays.
• Molecular Methods to Detect Viral Genes
 Nucleic acid probe-for detection of DNA or RNA by hybridization
 PCR- for DNA detection by amplification
 RT-PCR- for RNA detection
 Real time PCR- for DNA quantification
 Real time RT-PCR- for RNA quantification
• Isolation of Virus by
 Animal inoculation
 Embryonated egg inoculation
 Tissue cultures: Organ c ulture, explant culture, cell line culture (primar y, secondary and continuous
cell lines).
Embryonated egg
Cell tropism o f human viruses
Bacteriophages
• Bacteriophages are viruses that infect bacteria
• Morphology of bacteriophage
Life cycle of bacteriophage
• Lytic cycle
• Lysogenic cycles
Bacteriophages
• Phages play an important role in the
transmission of genetic information between
bacteria by the process of transduction.
• They can carry antibiotic resistance genes or
virulence genes.
• Bacteria can be typed by phage typing
methods for epidemiological purposes
DNA VIRUSES
Herpesviruses
• capsid is icosahedral
• linear double-stranded DNA genome
• The envelope carries surface spikes
Classification of human herpesviruses
HERPES SIMPLEX VIRUS (HSV)
VARICELLA – ZOSTER
• Varicella = Chicken pox (Primary infection)
• Herpes zoster = Shingles (Reactivation of latent
infection)
EPSTEIN - BARR VIRUS
• Causative agent of Heterophile (+)ve infectious
mononucleosis
• Associated with :
– Nasopharyngeal Ca
– Burkitt's lymphoma
– Hodgkin's disease (mixed cellularity type)
– B cell lymphoma in patients with immunoficiency
– CNS lymphoma in AIDS patient
– Increase risk of Thymoma, tonsillar and gastric
carcinoma.
• HH V – 6 cause exanthem subitum / roseola
infantum or sixth disease.
• HHV-8 is associated with AIDS / Non AIDS
Kaposi sarcoma.
ADENOVIRUS
• Space vehicle (Hexagonal shape) shaped, non
enveloped virus containing ds DNA.
Common syndromes associated with
adenovirus infection
Poxviruses
• Large, being 250-300 nm by 300-350 nm in
size, and just visible under a light microscope
• Genus Orthopoxvirus includes the viruses
causing cowpox, vaccinia and variola
• The variola virus causes smallpox, eradicated
now.
• Poxvirus causing molluscum contagiosum.
• Long question
Laboratory diagnosis of viral infections.
• Short notes -----
1. Replication of viruses
2. Methods of detecting viral growth in cell
cultures
3. Inclusion bodies
MCQ
1. Which of the following viruses is/are enveloped?
a. Poliovirus
b. Adenovirus
c. Herpesvirus
d. Parvovirus 8 19
2. All of the following are RNA viruses except:
a. Human adenoviruses
b. Enterovirus
c. Coxsackievirus
d. Hepatitis A virus
3. All of the following viruses are transmitted by respiratory
route except:
a. Influenza virus
b. Rotavirus
c. Respiratory syncytial virus
d. Rhinovirus
MCQ
4. All of the following are intracytoplasmIC
inclusion bodies except
a. Negri bodies
b. Molluscum bodies
c. Cowdry type A inclusions
d. Guarnieri bodies
5. Which of the following vaccine is a killed
vaccine?
– a. Mumps vaccine
– b. Measles vaccine
– c. Rubella vaccine
– d. Semple vaccine
THANK
YOU

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Viruses 1

  • 2. Characteristics of Viruses Obligate intracellular Possess either DNA or RNA but never both. Filterable- They are smaller than bacteria, passed trough bacterial filters. Can not be grown on artificial cell free media Multiply by a complex method, not by binary fission as seen in bacteria. Do not have a proper cellular organization. Do not have cell wall or cell membrane or cellular organelles including ribosomes. Lack enzymes necessary for protein and nucleic acid synthesis. Not susceptible to antibiotics.
  • 4. MORPHOLOGY OF VIRUS • Viruses possess a Nucleic acid- • DNA or RNA • single or double stranded, circular or linear, segmented or unsegmented • surrounded by a protein coat called ----- Capsid • composed of polypeptides called- capsomeres • Have antigenic property and specific for each virus • Specific arrangement of capsomeres called- Symmetry – Icosahedral (cubical) symmetry – Helical symmetry – Complex symmetry – Nucleic acid & capsid together k/s Nucleocapsid
  • 5. MORPHOLOGY OF VIRUS • Some viruses also have an outer envelope surrounding the nucleocapsid Lipoprorein in nature (Lipid+Protein) Lipid part- derived from the host cell membrane Protein part- virus coded, made up of peplomers, which project as spikes on the surface of the envelope-(e.g. Influenza viruses have hemagglutinin & neuraminidase peplomers) Peplomers are antigenic, bind to specific receptors on the host cells. Most Viruses are Enveloped Except • DNA viruses- Parvovirus, Adenovirus & Papovavirus • RNA viruses- Picornavirus, Hepatitis A virus & Hepatitis E virus.
  • 6. MORPHOLOGY OF VIRUS • Size of the Viruses Extremely small, vary from 20-400 nm in size. Smallest- Parvovirus (20 nm) Largest- Poxvirus (400nm).
  • 7. MORPHOLOGY OF VIRUS • Shapes of the Viruses Most are roughly spherical, Except ----- • Rabies virus: Bullet shaped • Rotavirus- wheel shaped • Coronavirus-petal shaped peplomers • Ebolavirus: Filamentous shaped • Poxvirus: Brick shaped • Adenovirus: Space vehicle shaped • Astrovirus-star shaped peplomers
  • 8. VIRAL REPLICATION • Attachment Penetration Uncoating Biosynthesis Assembly Maturation Release
  • 9.
  • 10. 11
  • 11. • VIRAL REPLICATION Viruses invade cells and use the host cell's machinery to synthesize more of their own macromolecules. • Once inside the host virus will either go into a 1. Lytic Cycle- destroying the host cell during reproduction. or • It will go into a 2. Lysogenic Cycle – a parasitic type of partnership with the cell
  • 12. 10 Virus injects its DNA Virus DNA commands host cell to make new viral parts New viral parts assembled Cell lyses (breaks apart) and new viruses are released Virus attaches to host cell. LYTIC CYCLE
  • 14. 13 • Does not begin immediately • Viral DNA (called a prophage) attaches to the host cell’s chromosomes – lies dormant. • The virus DNA integrates with the host DNA and the host’s cell helps create more virus DNA. LYSOGENIC CYCLE
  • 15.
  • 16. Morphological Changes in the Host Cells • Damage to host cell chromosomes: - with HSV or adenovirus infection- Formation of chromatin rings surrounding the nuclear membrane in host cells. • Formation of inclusion body- aggregates o f virions or viral proteins and other products of viral replication. characteristic of specific viral infections. demonstrated in virus infected cells under the light microscope. have distinct size, shape, location and staining properties to the host cell. lntracytoplasmic indusion bodies: Acidophilic, seen as pink structures when stained with Giemsa or eosin methylene blue stains (e.g. most pox.viruses and rabies lntranuclear inclusion bodies: basophilic in nature. Cowdry (1934) had classfied them into ----- – Cowdry type A inclusions: They are variable in size and have granular appearance. – Cowdry type B inclusions: They a re more circumscribed and multiple .
  • 18. LABORATORY DIAGNOSIS • Direct Demonstration of Virus  Electron microscopy  lmmunoelectron microscopy  Fluorescent microscopy  Light microscopy • Histopathological staining: To demonstrate inclusion bodies • lmmunoperoxidase staining • Detection of viral antigens  ELISA, direct IF, ICT, flow through assays. • Detection of the Specific Antibodies  Conventional techniques- HAI, neutralization test and CFT.  Newer diagnostic formats- ELISA, ICT, flow through assays. • Molecular Methods to Detect Viral Genes  Nucleic acid probe-for detection of DNA or RNA by hybridization  PCR- for DNA detection by amplification  RT-PCR- for RNA detection  Real time PCR- for DNA quantification  Real time RT-PCR- for RNA quantification • Isolation of Virus by  Animal inoculation  Embryonated egg inoculation  Tissue cultures: Organ c ulture, explant culture, cell line culture (primar y, secondary and continuous cell lines).
  • 20. Cell tropism o f human viruses
  • 21. Bacteriophages • Bacteriophages are viruses that infect bacteria • Morphology of bacteriophage
  • 22. Life cycle of bacteriophage • Lytic cycle • Lysogenic cycles
  • 23. Bacteriophages • Phages play an important role in the transmission of genetic information between bacteria by the process of transduction. • They can carry antibiotic resistance genes or virulence genes. • Bacteria can be typed by phage typing methods for epidemiological purposes
  • 25.
  • 26. Herpesviruses • capsid is icosahedral • linear double-stranded DNA genome • The envelope carries surface spikes
  • 27. Classification of human herpesviruses
  • 29. VARICELLA – ZOSTER • Varicella = Chicken pox (Primary infection) • Herpes zoster = Shingles (Reactivation of latent infection)
  • 30. EPSTEIN - BARR VIRUS • Causative agent of Heterophile (+)ve infectious mononucleosis • Associated with : – Nasopharyngeal Ca – Burkitt's lymphoma – Hodgkin's disease (mixed cellularity type) – B cell lymphoma in patients with immunoficiency – CNS lymphoma in AIDS patient – Increase risk of Thymoma, tonsillar and gastric carcinoma.
  • 31. • HH V – 6 cause exanthem subitum / roseola infantum or sixth disease. • HHV-8 is associated with AIDS / Non AIDS Kaposi sarcoma.
  • 32. ADENOVIRUS • Space vehicle (Hexagonal shape) shaped, non enveloped virus containing ds DNA.
  • 33. Common syndromes associated with adenovirus infection
  • 34. Poxviruses • Large, being 250-300 nm by 300-350 nm in size, and just visible under a light microscope • Genus Orthopoxvirus includes the viruses causing cowpox, vaccinia and variola • The variola virus causes smallpox, eradicated now. • Poxvirus causing molluscum contagiosum.
  • 35. • Long question Laboratory diagnosis of viral infections. • Short notes ----- 1. Replication of viruses 2. Methods of detecting viral growth in cell cultures 3. Inclusion bodies
  • 36. MCQ 1. Which of the following viruses is/are enveloped? a. Poliovirus b. Adenovirus c. Herpesvirus d. Parvovirus 8 19 2. All of the following are RNA viruses except: a. Human adenoviruses b. Enterovirus c. Coxsackievirus d. Hepatitis A virus 3. All of the following viruses are transmitted by respiratory route except: a. Influenza virus b. Rotavirus c. Respiratory syncytial virus d. Rhinovirus
  • 37. MCQ 4. All of the following are intracytoplasmIC inclusion bodies except a. Negri bodies b. Molluscum bodies c. Cowdry type A inclusions d. Guarnieri bodies 5. Which of the following vaccine is a killed vaccine? – a. Mumps vaccine – b. Measles vaccine – c. Rubella vaccine – d. Semple vaccine